Calonectris borealis (Cory's shearwater): 142087765
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Entry
142087765 CDS
T11211
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03420
Nucleotide excision repair
cbor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142087765 (CUL4B)
09124 Replication and repair
03420 Nucleotide excision repair
142087765 (CUL4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142087765 (CUL4B)
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142087765 (CUL4B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142087765 (CUL4B)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
142087765 (CUL4B)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
142087765 (CUL4B)
TCR (transcription coupled repair) factors
Cul4-CSA complex
142087765 (CUL4B)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142087765 (CUL4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
142087765
NCBI-ProteinID:
XP_075018458
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All DBs
Position
13
Genome browser
AA seq
887 aa
AA seq
DB search
MITSGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNNSNSNSEREEFDSISSCASSP
SKNTSSSSSSIITTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAA
SSQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKP
KLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICED
HIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD
MGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFE
HRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEK
QLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAE
KSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGY
WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS
LFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGD
KFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH
NLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttccggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaataccagcagcagctcctcctgcaagaagagaaagttaaataacaac
agcaacagcaattctgaaagagaagaatttgattccatttcttcctgcgcctcttctcct
tccaaaaacacctcctcatcatcttcctccatcatcaccacctcctcgtgctcctcctca
ggggttgcctcctccaaccatcacctccagaagaagctgcgctttgaggactccgtggat
tttattggactcgatgtgaagatggctgaagagtcttcttcctcctcctctcctgctgcc
tcttctcaacagcagcaccaacaacagctcaaaaataaaagccttttaatttcgtcagtg
gctgtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttc
gccaacagtaaacctggctctgctaagaaattagtgatcaagaactttaaagataaaccc
aaattgcctgaaaactacacagatgaaacctggcaaaaactgaaagaagctgtagaagct
atccagaacagtacttcaattaagtacaatttagaggagctctatcaggctgttgaaaat
ctctgctcctacaagatttctgcaaacttgtacaaacaattgagacagatctgtgaagac
cacattaaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttcta
aagaaaatagacaaatgttggcaagatcactgcagacaaatgattatgattagaagtatc
tttttgttcttggatcgaacttacgtacttcagaattcaatgctaccatctatttgggat
atgggcctagaattgttcagaactcatataatcagtgatcagaaggttcagaacaaaact
attgatggcattcttcttctgattgagagggaaagaaatggtgaggctattgataggagt
ttactgcgaagccttctaagcatgctctctgacttgcagatttatcaagactctttcgaa
cacagattcttggaagagactaaccgcctgtatgcagcagagggacagaggcttatgcag
gaacgagaggttccagaatatcttcaccatgtcaacaagcgcttggaagaagaagcagac
aggataatcacttatttagatcagagcacacagaagccactaattgctactgtagaaaag
caacttctaggtgaacatttaacagccattcttcagaaaggtttaaaccaccttcttgat
gaaaaccgaattcaagacctgtctcttctgtatcagttgttcagtcgtgtgagaggcgga
gtacaggttctcttgcaacactggattgagtacataaaggcatttggtagcaccatagta
attaatccagaaaaagacaaaaccatggtccaagaactacttgattttaaagacaaagtt
gaccatattattgatgtttgctttctcaagaatgagaagtttgtaaatgccatgaaagaa
gcctttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatac
gtagattcaaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaaatg
ctggataaaattatgatcatatttagattcatatatggaaaagatgtctttgaggccttt
tataaaaaagatctagcaaagagactattagttgggaaaagtgcatcagtagatgctgaa
aaatccatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaactagaa
ggaatgtttaaagatatggagctttcaaaagacataatgatacaatttaaacagtatatg
caaaatcagaatgtacctggcaacattgaactaacagtgaatattctgactatgggttat
tggccaacctacgtgcctatggaggtccatttgcccccagagatggtaaaactgcaggag
attttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtcaaca
ctaggacactgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctcc
ttgttccagacactggtgctgctcatgtttaacgaaggagaggagttcagtttagaggag
ataaagcaagccactgggatagaggacggagagctgcgaaggacacttcaatctctggct
tgtggcaaagccagagtcctgactaaaagccctaaaggcaaagatgtggaagatggtgat
aaattcacatgtaatgatgatttcagacataagctcttcaggataaagatcaaccaaatt
cagatgaaagaaacggtagaggaacaggcaagcactacagagagagtattccaggaccgg
caataccagattgacgctgcaattgtacgaatcatgaagatgcgcaagacactgagtcac
aacctgcttgtgtcagaggtctacaaccagcttaaattcccagtaaagcctgctgacctt
aagaagagaatagaatccttaattgacagggactacatggaaagagataaagaaaaccca
aatcagtacaactatattgcataa
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