Calonectris borealis (Cory's shearwater): 142087776
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Entry
142087776 CDS
T11211
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
cbor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142087776 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
142087776 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142087776 (THOC2)
03041 Spliceosome [BR:
cbor03041
]
142087776 (THOC2)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
142087776 (THOC2)
Spliceosome [BR:
cbor03041
]
Complex C
Other components
EJC/TREX
142087776 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142087776 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
142087776
NCBI-ProteinID:
XP_075018474
LinkDB
All DBs
Position
13
Genome browser
AA seq
1678 aa
AA seq
DB search
MERRAPSPRVRRVRVPSFLAGRCVPSDPGPLLHHPGSRRHTGKMAALLPAEWIKNWEKGG
KNEFVQLCRTLSENKSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDM
PSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLI
GCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSG
ETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSS
EKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIA
IALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGP
HLSHDPILFAKVVRLGKAFMKEVGTMKKFVSDRVVKFQSDGSKQEDKEKMEILFSCLLSI
TDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTI
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTS
LNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVAN
QLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKV
HKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKL
KVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLA
KSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIY
TVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALER
RVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPG
GAGMPTSVTINTVRLEEGTTEETDKLKEKSQGVVKVINKAVNATPKVTTSNGNSASNSKI
IKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDDKAREIKEKTPK
SDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDVAKEMKSKENAKGG
EKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKGMAMLPKLPLVSENYSS
LRVISIHFLQDNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDE
KDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSK
SSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcgcgcgccgtctcccagggtacggcgcgtccgcgtcccgtcgttcctcgcg
ggccgttgcgtcccctctgacccgggcccgctgctccaccatccgggctctcggcgccac
acggggaagatggcggcgctgctccctgccgagtggataaagaactgggagaaagggggc
aagaacgagtttgtccaactatgtcgcactctcagtgagaacaaaagccatgataatatg
ggtttcagagatatccaacaggctttgtatgagcttgcataccacgttgtcagaggaaac
ttgaagcatgatcaagcctctaatgttcttggtgatgtcatagaatttcgggaagacatg
ccttccatcctagctgatgtattctgtatattagatattgaaacaagttgtttagaagaa
aaaagtaagagggatcatttcacccaattggtattagcctgtttgtatcttgtatctgac
actgtcctaaaggagcgtttagatccagagacactggagtcattaggacttataaagcag
tctcaacagttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacag
aagtttaatttgttaagagaggagaatgaaggttatgcaaagctcattgcagaactgggg
caagacttatctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaata
ggatgttttaacctggatcctaacagagttttggatattatcctagaagtctatgagtgc
aggcctgagtatgatgatttctttgtaccactcatagagtcttacatgtacatgtgtgaa
cctcaaactctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggt
gagacaccttcctccttatacagagttgctgctgtccttttgcaacataatctcatagat
ttggaagatctttatgttcatcttcttccaggggataatgccatcattgaggaacacaag
cgagagatagtggaagctaagcaaattgtcagaaaacttacaatggtcgtcttgtcttct
gaaaagactgaggaaaaggagaaggaaaaagaaaaagaggaggagaaaaccgaaaagcct
cctgataatcaaaagcttggtttgttggaagctttattaaaaattggtgattggcagcat
gcacaaagtattatggatcagatgcctccgttctatgctacttcacacaagcctattgca
attgccctttgccagcttgtacatgtgacaattgaacctctgtaccgcagagttggtgta
cctaaaggagctaaagggtcaccaatttcttcgttgccaaacaagagagcaccaaaacaa
gcagacagctttgaggacttgagaaaggaagtgttcaacatgctttgttaccttggtcct
catctctcccatgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatg
aaagaggttggaactatgaagaaattcgtcagtgacagagtggttaagtttcagtctgat
ggaagcaagcaagaagataaagagaaaatggagatactgtttagctgtttgttgagtatt
accgatcaagtcttacttccatctctttctttgatggactgcaatgcatgcatgtctgaa
gaattatggggaatgttcaaaacttttccataccagtaccggtaccgtctttatgggcaa
tggaagaacgaaacatacaacagtcacccacttctagtgaaagtcaaagctcaaaccata
gaccgagccaaatatatcatgaagcgtttaactaaggaaaatgtgaaaccctctggaaga
caaattgggaagctcagccacagcaatcctacaattttatttgattatattttatcacaa
atacaaaaatatgataacttaataactccggttgttgattcactgaaatacctcacttcg
ctgaactatgatgtcttggcatactgtatcattgaagctctggcaaaccctgagaaggag
agaatgaagcatgacgacactacaatctcaagctggctgcagagtctggctagcttttgt
ggtgcagttttccgaaaatacccaattgaacttgctggtctacttcagtatgtagccaac
caactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtacagaaaatg
gcagggatagaaattacagaagaaatgacaatggaacaattggaagccatgactggtgga
gaacaactaaaagctgagggtggatacttcggacaaatcaggaatacaaaaaaatcttct
cagagattgaaagatgcgttgttggaccatgatcttgcccttccactgtgcctgcttatg
gctcaacagagaaatggtgtgatctttcaagagggaggggaaaaacatctgaagctggtg
ggaaaactgtatgatcagtgccatgacaccctggtacaatttggtgggtttttagcatcc
aatctaagcacagaggattacattaagcgagtgccttctattgacgttctctgtaatgag
tttcacacacctcatgatgctgcatttttcctctcaagacctatgtatgcacaccatatt
tcgtcaaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcacaaagtt
cacaaatacattacatcatgtgagctggtgatggctcctgttcatgatgctgtgatttct
ctgcaccttcccaaggtttgggatgacatcagtcctcagttttatgctacattctggtct
ttgacaatgtatgaccttgccgtcccacatagtagctatgacagagaagtcaataaactt
aaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgcacagctcttcaggacaagctccttgaagaggagaagaagcagttg
gagcatgtgcagagggttctacagagactgaaactagagaaggataactggcttctggca
aagtctaccaagaatgagactatcacaaaatttttgcagttatgtatatttcctcgatgc
attttttcggcaatcgatgcagtttattgtgctcactttgtagaactggtgcatcagcag
aaaacacccaacttctccacacttctctgctatgacagagttttctctgatattatatat
acagttgcaagttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatg
ctggagactgtgactagatggcacagtgacagagtcatatatgaaaaggaatgtggcaac
tatccaggcttcctaactatattacgggcaactggatttgatggtggaaataaagctgat
caattggattatgagaattttagacatgtggtacacaaatggcactataagttaactaag
gcttctgtgcactgccttgaaacaggtgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagtgctgaatctgggccaagccttggaaaga
agagtgcataagatatgtcaggaagagaaagagaagagacctgatctatatgcattggct
atgggctattctgggcagttgaaaagtaggaagcctttcatgatacctgaaaatgaattc
caccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggt
ggtgctgggatgcctacatctgtcacaataaatacagttagactggaagaaggcactact
gaggagactgataaactaaaggagaagtctcagggtgtggtgaaagttattaataaagct
gtcaacgctacaccgaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaatt
attaaagagaaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagac
aagactccagctgccactccagagatgaaggcacttgggaaggatgggaaagataaacca
aaggaagaacgggcaaacaaagatgataaagcaagagagatcaaggagaaaacgccaaaa
tctgacaaagagaaggaaaaagtcaagaaagaagagaaagcttcaaaagaagaaaaatcc
aagacagttgttaccatcattgagtcaaagtcaactgcagaaaaggagagagaaaaggag
ccgtccagagaaagagatgtagcgaaggaaatgaaatccaaggaaaatgctaaaggagga
gaaaagatgccagtagctgggtccttgaagtcacctgttccccgatcagaaacatccgaa
tctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccgtcacattcctca
acagtaaagggtatggccatgcttcccaaacttcctctggtttctgaaaactattccagc
ttacgtgtcatctccattcattttctacaggacaacctcaacgaactcaaggactcttca
gcaaagcactacattaaccacactactccaacactgtccaagagtaaggagagagaagtg
gacaagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgaa
aaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccacaggat
tcaactaaacgacgcaaagaagaaaatgggacaactggttcttcaaaacatagtaaaagt
gaaagtccttctgattcccctcgcttaaatgaaaaggagaaagagaagaacaaatcaaaa
tcttcaggaaaagagaaaggtgattcaattaaagcagaaaagatggagaagagttcctct
ggtagcaaaaaggagtcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagac
agtactggagggaaagaagaaaagaaacatcataagtcttcagacaagcacagataa
DBGET
integrated database retrieval system
