Calonectris borealis (Cory's shearwater): 142087823
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Entry
142087823 CDS
T11211
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142087823 (RLIM)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142087823 (RLIM)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142087823 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
142087823
NCBI-ProteinID:
XP_075018586
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All DBs
Position
13:22067726..22086288
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AA seq
595 aa
AA seq
DB search
MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSGGEDLENSQSDSEIPRS
ESPSVRQPGSERSTSEELTTEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSETP
RRSHHNTSSQTLDHSSVNEAEGSSRTRQHVTLRQHTVGTEMPSENAVLFSTPETRPVPQA
AGSSETNGTSESATPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPSGPTPNQNVDASEPQNGGGGTSSNEGTDVGSGEVYEGGNEGGSTSGARR
EGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctagtgataaaggaaatatcgatcaatcagaagcacaacgtcag
agtcagctagatcggttagatcgagaagaagctttctatcagtttgtaaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacaacacgaagtgggcaacgaggaaaccag
tcttggagagcggtgagccggactaacccaaatagtggtgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacaaatccagaaactgagaatgagccatctgta
gagccttccggtggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcgccatctgtaaggcagcctggatcagaaaggagcacttcggaggagctgaccact
gaggaagcttcccctcctagagggcagaggagagcgagaagtaggagtccagaacagcgg
agaacgcgggctaggactgatagaagtaggtcacctattaatccagtgagtgagactcct
cgcaggtctcatcacaatacatcatctcaaacacttgaccactcctcagtgaatgaagct
gagggaagctctagaactaggcagcatgtgacattaaggcagcatacagtggggactgag
atgccaagtgaaaatgcagttctgttttcaacccctgaaacgagacctgttcctcaagca
gcaggttcttcagaaactaacggcaccagtgagtccgcaactcctgggcagaggcctcct
accatagtacttgatcttcaggtgagaagagttcgtccaggagaatatcggcaaagagac
agcatagccaacagaactcggtccaggtcccagacacctaacaacacagtcacttacgaa
agtgaacggggagggtttaggcgcacattttcacgttcagaacgggctggagtgagaact
tacgtcagtaccattaggattcctatccgtaggatcttaaacacaggcttgagtgagact
acatcagttgctattcagactatgctgaggcagataatgacaggcttcggagagctgagt
tactttatgtatagtgatagtgatgcagatcctagtggcccaactccgaatcagaacgtg
gatgcttctgagccccagaacggaggcggtggtacttcaagcaatgaaggtacagatgtt
ggctcaggggaggtgtatgaaggtggtaatgaaggcggttcaacatctggtgccagacgg
gaaggtcggaatacgaggggatcggtcacatttgaagaaagtggttctttaccattcctt
agcctagcacaatttttcctactaaacgaagatgacgatgaccaaccaagaggactcacc
aaagaacaaattgacaacctagcaatgaggaattttggtgagagcgatgctctgaaaacc
tgtagtgtgtgtattacagagtacacggaaggcaacaagctccgtaaattgccttgttcg
cacgagtatcacgtccactgcattgatcgctggttatcagaaaattccacttgtcccatt
tgtcgcagagcagtcttagcttctggtaacagagagagtgttgtctaa
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