Calonectris borealis (Cory's shearwater): 142087922
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Entry
142087922 CDS
T11211
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142087922 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142087922 (ATRX)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142087922 (ATRX)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
142087922 (ATRX)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
142087922 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
142087922
NCBI-ProteinID:
XP_075018808
LinkDB
All DBs
Position
13:21418008..21506558
Genome browser
AA seq
2409 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDAVSPPALSKNKTIGKSREPKSSPASMENN
REEGSSSSERTKSLGSSRSKRKPTIVTKYVGSDDEQILDETVNEDISNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNAVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIR
VESEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYSYKALMVPKDLLKKTKKLV
ETTANLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQAL
NVKIKDKNTKEKKTDVRSEKNEVKKDEGKEHVALKEDDTVKTQKKVVSERPDSEPMDQSV
PTTEQTDNKRTSGEDKRSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
VTSDEQDNGNTGTDHETLNSNIKLNAPMKDAKGGTKLKSSAKGTKELIVKLTPVSLSEST
VKAEDQDSNLEKGSKDVDVIPRAENCDSVKQNHNAGSEPSTENETVSLVEESDLRRSPRV
KTTPLRRQTDVNPLTSNSEEDSNDTCNEKRKRKSSKQPRRKNDKRNSSDSTVDGPSPNKL
SKSKKPYVLDHSSDSDEMPAVLKEVAMMSHSSSDIESNSEAPTNDQKTLNFLKNQPVKDE
NGKRKRKSSSSGSDLDAKRGKSAKNSAAAKKKRQNYSDSSNYDSELEKEIKILSKIESAK
KAKKKYSRKEDSYDSSEEEQRKKVSSKRKINLKKQREKSSEDGDAEKSSPEKEINHSSKD
KIGKGSAAKERINRDLKEKTVKGKHDESSDVEKSSLEKEESCPKGVKLTEVKKSKDLKKK
KAQEDSSSESTEKSAKKEHDFDSSKDRFKNKKESEGKAKKSEKSKKKSYKKEQDDSSSDV
EKSSPEKGSCHSSENDKTKNEPVFKEKKRRNLRERVSKRVQIDLSSDAEKSPLKEESSSE
DALRSKKQTETKEKKKISHKKKISKKDQNDSLSSSDEESYEDSKKKVKRGSMKESKKSNL
KKKVSKKKVVVTSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDE
GETKSRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDDESDEGKKKTGKQ
NENTGDDEENEKEDNSESDSEEEESKKPRYRHRLLRHKLTVSDGESGEEKKVKPKDKKEG
KRRSRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRR
RIKVQEDSSSENNNKSNSEDEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERR
KRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRNIVTRLKPHQ
VDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALV
VCPLNTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYE
MYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRI
ILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRA
HILYEMLAGCVQRKDYTALTKFLPPKYEYLLSGVGSGNEGGRGKAGAKLFQDFQMLSRIW
THPWCLQLDYISKENKGYFDEDSLDEFIASDSDETSMSLSSDDYAKKKKSKGKKVKKECS
SSGSGSDNDVEVIKVWNSRSRGGGEGNAEELVNNPPSVTKSDEGKATSSSNPGSPAPDWY
KDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKT
DKEKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLG
INLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQ
SLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQI
NKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNMPTGTNMLPTNFN
SQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQPLEDIISTIWKENVT
LTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQ
QQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQPPPLQRAPPPMRGKN
PGPSPGKSM
NT seq
7230 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgtgagtgaaagcaagttgaatacattggtgcagaaacttcatgac
ttcttggctcactcatcggaagaatctgaggacgcagtctctcctccagcattatctaaa
aacaaaaccataggtaaaagtagagaacctaaaagtagtccagcttcaatggagaacaat
agagaagagggaagtagttcttcagaaagaaccaaatccttaggatcatcacgttcaaaa
aggaaacctacaattgtaacaaaatatgttggatcagatgatgaacaaatcttagatgaa
actgtaaatgaagatatttcaaatgaaaactcagaaaacgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaatgccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcaatctatagacatcctacactgaaagttcttatttgtaagact
tgttacaagtattacatgagcgatgacattagccgtgattcagatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttctgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagttatcgactatactggatgaa
aataatcagtggcactgctatatttgccatccagagcctttgttggacttggtcactgca
tgtgacagtgtctttgaaaatttagaacagttactgcaacaaaacaaaaaaaagatcaga
gttgaaagtgaaaaaagtaaaatatatgaccatacagtcaagttttctccaaagagaaat
aattcaaattgtaatggtgaagaaaaaaaactagatgattcatattcaggttcactaaca
tattcttataaagcactaatggtgccaaaagacttgcttaagaaaacaaaaaagctggtt
gaaactacagcaaatctgaattctagctttgtaagctttctgaaaaatgctgcagaaaat
gtagaaataagcccaactgtgcaactttgtcagctaaaagcttttaaatctgtgttgagt
gacatgaaaaaagctcatctggcactagaagaaggcctgaacctggagattcaagctttg
aatgttaaaatcaaagataaaaataccaaagagaaaaaaactgatgttagatcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacatgtggcattaaaagaggatgacaccgta
aagacacagaaaaaagttgtatcggaacggcctgacagtgagcccatggatcaaagtgtt
ccaacaacggaacaaacagataacaagcgtacttctggtgaagataaaaggtctggcaga
aatgaagaacctcagtatgaacctaatagtacagaggctttagacatggatatagtgtcc
attccctcatctgttcctgaagatatttttgagactctagaatctgctatggagattcag
gttacatcagatgagcaagacaatggaaatacaggaaccgatcatgagactctaaattca
aatataaaattgaacgctcctatgaaagatgccaaaggtggtactaaattaaaatcatcg
gctaaaggaacaaaagaattgattgtaaaattgactcctgtttccctttcagagtctaca
gttaaagctgaagatcaagacagcaatctagaaaagggaagtaaggatgtggatgtaata
cctagagcagaaaactgtgattctgtaaaacaaaatcataatgctggcagtgaaccttcc
acagagaacgaaacggtgtcacttgtagaggaatctgatctcaggagatcaccgcgtgtg
aagaccacacctctgaggcgccaaacagacgtcaatcctttaacatcaaattcagaagaa
gatagcaatgacacttgtaatgaaaaacgtaagagaaaatcatcaaaacaaccaaggagg
aaaaatgataaaagaaattcttctgacagtactgttgatggtcctagccctaataaactt
tctaaatcaaaaaagccgtatgtattagatcatagctcagattctgatgagatgccagct
gttcttaaagaagtagctatgatgagtcacagttcttcagatattgagagcaatagtgaa
gcaccaacaaatgatcagaagactttaaattttctaaagaatcaaccagtaaaggatgaa
aatggaaaacgaaaaagaaaaagttccagttctggttcagatttagatgctaaaagaggc
aaatcagctaaaaattccgctgctgctaaaaagaaacgacaaaactattcagattcttca
aactatgattctgagttagaaaaagaaataaaaattttgagtaaaattgagtctgcaaaa
aaagctaagaaaaaatactcacgaaaagaagatagttacgattcctctgaagaagaacag
aggaaaaaagtaagcagtaagagaaagataaatttgaagaaacagagagagaaatcttct
gaagatggcgatgctgaaaagtcttccccggagaaggagattaatcattcttctaaagat
aaaattggtaaggggtcagctgctaaggaaaggataaacagagacttaaaagaaaaaact
gtaaaaggaaagcacgatgaatcttctgatgttgagaagtcttcactggagaaagaggag
agttgtcctaaaggtgtaaagctaactgaagttaagaagagcaaggatttgaaaaagaaa
aaggcacaggaagattcttcttcagagagtactgagaaatctgcaaagaaggagcacgat
tttgattcttcaaaagacagattcaagaataaaaaggaatcagaaggcaaagcgaagaaa
tctgaaaaatcgaaaaagaaaagttacaagaaagaacaagatgattcctcttctgatgtt
gaaaagtcatctccagagaaaggaagttgccattcttctgaaaatgacaaaactaaaaat
gaaccagtgtttaaagaaaagaaaaggaggaatttaagagagagagtatccaaaagagta
cagattgatttatcctctgatgctgagaaatctcccctaaaagaggagagttcttctgaa
gatgctctgcggagtaaaaaacaaactgaaactaaagaaaagaaaaaaataagtcacaaa
aagaaaatttccaagaaagaccagaatgactcgttgtcctcttctgatgaggagtcttat
gaagacagtaagaaaaaggttaaaagagggtcaatgaaagaaagtaaaaagagtaactta
aaaaagaaagtgtcaaaaaagaaggtggttgtcacttcgtcttcctcgtctgataaggaa
gaaaatgatgaacagaattcaacaggtgatggaagcagtgatgagcagaaaattatgcca
gtgactgaaaacttaatgctgtctgctggtacaggattttgtcagtcatcaggagatgag
ggagagactaaatcaagggctgttccaatggaggaggaggaagatgatgatgatgacgat
cctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcctct
gatgaggatgcatcttcagatgatgaatcggatgaaggaaaaaagaaaactggaaagcaa
aatgaaaacacaggagatgatgaagagaatgaaaaggaagataattctgaatcggattca
gaggaagaagaatcaaagaagcctagatacagacacagactgctgaggcacaagctgaca
gtgagtgacggagaatccggtgaagaaaaaaaggtgaaaccaaaagacaaaaaagaaggg
aagcgcagaagtagaaggaaagtgagcagcgatgattcaaatgactccgagtttcatgaa
tctgcagttagtgaagaagtgagtgagtctgaagatgaccaacgtccaagaacaagatct
gccaagaaagctgaggcagaagaaaaccagcgcagttacaaacagaaaaagaaacgaagg
cgtataaaggttcaagaggattcttcaagtgaaaacaacaataagagtaattctgaggat
gaggacaatgatgattcaaaatctcctggaaaaggcagaaagaaaataaggaagattatt
aaagatgataaacttagaacagaaacacaaaatgcacttaaagaagaagaagaaagaaga
aaacgtatagcagaaagagaacgggagagagagaaattgagagaggtgatagagatagaa
gatgcttcacctctgaaatgtcccattacaactaagctggttttagatgaagatgaagaa
accaaagaaccgttagtgcaggttcacaggaatatagttaccagactgaaaccacaccaa
gtagatggtgttcagttcatgtgggattgctgttgtgaatctgtaaaaaaaacaaagaca
tctcctggttctggatgcattcttgctcactgtatgggtctggggaaaacattacaggta
gtaagttttctacacacggtcttgctgtgtgacaagctggattttcggacagctctggta
gtgtgtccactgaacactgccttgaactggttgaatgagtttgaaaaatggcaagagggt
ttagaagatgatgaaaaactagaggtctgtgaactagcaactgtgaaacgccctcaagag
agaagctatatgctccagcgttggcaagatgaaggaggtgtgatgataataggctatgag
atgtatcgtaatcttgcacaaggcaggaatgtgaagagtagaaaacttaaagaaatattt
aataaagctttagttgatccaggccccgactttgttgtttgtgatgaagggcacatacta
aaaaacgaagcatctgctgtttctaaggcaatgaattctattcgatctaggagaagaata
attctgacaggaacaccactgcaaaataatcttatagaatatcactgcatggttaacttt
attaaggagaatttgcttggttcgattaaggaattccgaaatcgatttataaatccaatt
cagaacggtcagtgtgcagactctactctggtagatgtcagagtaatgaagaagcgtgca
catatcctctatgagatgttagctggatgtgttcagaggaaagattacacagcattaaca
aagttcctcccaccaaaatacgagtatttattgtcaggtgtaggtagtggcaatgaaggt
ggaagaggcaaagctggagctaaactattccaggatttccagatgttgagcagaatctgg
actcacccttggtgtttgcagctggactatattagcaaagaaaataagggctattttgat
gaagacagtctggatgagttcatagcttcagattccgatgaaacttcaatgagcttaagt
tctgatgattatgcaaagaaaaaaaaatccaaggggaaaaaagtgaagaaagagtgtagc
tcaagcggaagtggcagtgataatgatgttgaagtcattaaagtctggaattcaagatct
cgtggaggtggagaaggaaatgcagaagaactcgtaaacaaccctccatcggttacaaaa
tcagatgaaggcaaagctacatcctcttccaatcctggtagcccagcgccagattggtac
aaagattttgtcactgatgcagatgctgaagtgttggaacattctgggaaaatggtgctt
ctctttgaaattcttcgaatggcagaggagcttggagacaaagtcctagtatttagccag
tccctaatatctctggatttgatagaagattttctggagctggccaacagggagaaaact
gacaaagagaagcctcctatttataaaggtgaaggaaaatggttcagaaacattgattac
tatcgcttagatggttcaactacagctcagtcaagaaagaaatgggctgaagaatttaat
gatgaaactaatgtgagaggccgcttgtttattatatccactaaagcaggttcccttgga
attaatcttgtggctgctaatagagtaatcatctttgatgcttcttggaacccatcgtat
gacatccagagtattttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtac
aggtttttggctcagggaacgatggaagacaagatctatgatcgtcaggtaacaaagcag
tcattgtctttccgagttgtcgaccaacagcaagttgaacgtcattttactatgaatgaa
cttacagagctgtacacttttgagccagatttgctggatgatcctaattcagaaaagaaa
aagaagagagatacaccaatgttgccaaaagacacaattctggcagaattgcttcaaatc
aataaagagtatatagttgggtatcacgaacatgattcactcctggaccataaggaggaa
gaggaactcactgaagaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaag
ggcttgactatgcgtttcaacatgccgactgggaccaatatgcttcccacaaatttcaac
tctcaaacaccgtatattcctttcaatttgggtgctctgtcagcaatgagtaatcaacag
ctggaggaccttattaatcaaggaagagagaaagttgtggaagcaaccaacagtgtaact
gcagcaagaattcagccccttgaagacatcatttcaaccatatggaaagaaaatgtaaca
ctcacagagagccaagtacaggccctggcactgagcagacaggcaagccaggagcttgat
gtcaagcgccgagaagccatctataatgatgtccttactaaacaacagatgttaatcagt
tgtgttcagaggatacttatgaacagaagactacagcagcagtacaatcagcagcaacag
cagcagatgtcttaccagcaagcagcaatgagtcatctcatgatgccaaagcctccaaat
ttaatcatgaatccttccaactaccaacagatagatatgagaggaatgtatcagtcagtg
tctggtggtatgcagccaccaccattacaacgagcaccacccccaatgagaggcaaaaat
ccagggccttccccagggaaatcaatgtga
DBGET
integrated database retrieval system
