Calonectris borealis (Cory's shearwater): 142088044
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Entry
142088044 CDS
T11211
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04620
Toll-like receptor signaling pathway
cbor04621
NOD-like receptor signaling pathway
cbor04622
RIG-I-like receptor signaling pathway
cbor04623
Cytosolic DNA-sensing pathway
cbor05164
Influenza A
cbor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142088044 (IRF7)
04621 NOD-like receptor signaling pathway
142088044 (IRF7)
04622 RIG-I-like receptor signaling pathway
142088044 (IRF7)
04623 Cytosolic DNA-sensing pathway
142088044 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142088044 (IRF7)
05168 Herpes simplex virus 1 infection
142088044 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142088044 (IRF7)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
142088044 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
SHQ1
Motif
Other DBs
NCBI-GeneID:
142088044
NCBI-ProteinID:
XP_075019044
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Position
14:complement(1437937..1442541)
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AA seq
520 aa
AA seq
DB search
MAALQSEGDAQKLRFGPWLVSAISSGSYRGLRWTDPAHSTFRVPWKHNARKDITSSDLEV
FKPGSPCSPPRTSQAWAQVSGRYEGCPEDPAKWKTNFRCALRSTRMFVLLEDHSKCGDDP
HKVFAIAPAAQWHDEEGDFDGPDPAVDQQPLHQQPQLELDPQDVGPEITPSGSADPARPP
LLEDLEMLQWVLQQCDISPRDLGPPTPSWAPAEDAPHLQPHPDPSQNNLLPPPAFQQWVP
VVEQPPLGAYSPPDPMLLEEPAAGAMPLPRHPPEVTVPVPSPGEAMLFAPAASPVPPPPP
LEDNTDGIIPILDVSIYYRGKPFHQEEVGGGRCLLAYQPSDPAVALRPGRLVRFPSPAEL
ADSKQRRFTEELLGTSGLQLEQRAGKLFATRLKKCKVFWALSQQLEGGGDPPHNLLCRDQ
ETPIFDFNDFCTELRDFRNGHRRRSPDFTIYLCFGQSFSQAKPKESKLILVKLVPKFCEY
WYEQVLREGASSLDSGTVSLQLSDSFSLFELIEQCNMQMD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctgcagagcgagggggacgcccagaagctgcggttcgggccctggctggtg
agcgccatcagcagcgggagctaccgggggctgcgctggaccgacccggcccacagcacc
ttccgcgtcccctggaagcacaacgccaggaaggacatcaccagcagcgacctggaggtc
ttcaagccagggtcaccatgctcacccccccgcacctcccaggcctgggcacaggtgagt
ggacggtatgaggggtgccccgaggacccagccaagtggaagactaacttccgctgcgcc
ctgaggagcacccgcatgttcgtgctgctggaggaccactccaagtgtggtgacgacccg
cacaaggtcttcgccatcgccccagccgcccagtggcacgatgaggagggagatttcgac
ggccctgaccctgcggtggaccagcagccgctgcaccagcagccgcagctggagcttgac
cctcaagatgtgggcccagaaattaccccctcaggcagcgctgaccccgctcggcctccg
ctgctggaggacctggagatgctgcagtgggtgctgcagcagtgcgacatctccccccgc
gaccttggccccccgaccccatcctgggcgcctgcagaggatgccccccacctccagcct
cacccagaccccagccaaaacaacctcctccccccaccggcatttcagcaatgggtgccc
gtggtggagcagccccccttgggtgcctacagccccccggaccccatgctgctggaggag
ccagccgcaggggccatgccgctgccacgccacccgccggaggtcacggtccccgtgccg
tccccaggggaggcgatgctcttcgcccccgccgccagccctgtgccaccgccaccgccg
ctggaggataacacagatggcatcatccccatcctggacgtcagcatctactaccggggg
aagcccttccaccaggaggaggtggggggcggccggtgcctgctggcgtaccagccctcc
gacccggcggtggccctgcgccccgggcgcctggtgcgcttccccagccccgccgagctg
gccgacagcaagcagcggcgtttcaccgaggagctgctgggcacctcagggctgcagctg
gagcaacgcgccggcaagctcttcgccacccgcctgaagaagtgcaaggtcttctgggcc
ctgtcccagcagctcgagggtggcggggaccccccgcacaacctgctctgccgggaccag
gaaacccccatcttcgacttcaacgatttttgcacagagctgagggacttccgcaatggc
cacaggcggcggtcccctgacttcaccatctacctctgcttcgggcagtccttctcccag
gccaagcccaaggagtccaagctcatcctggtcaagctggtgcccaagttctgcgagtac
tggtacgagcaggtgctgcgggagggagcctcctccctcgacagcggcaccgtcagcctg
cagctctccgactccttcagcctcttcgagctcatcgagcagtgcaacatgcagatggac
tga
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