Calonectris borealis (Cory's shearwater): 142088098
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Entry
142088098 CDS
T11211
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03022
Basal transcription factors
cbor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142088098 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
142088098 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142088098 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142088098 (GTF2H1)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
142088098 (GTF2H1)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
142088098 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
142088098
NCBI-ProteinID:
XP_075019153
LinkDB
All DBs
Position
14:complement(5349917..5373840)
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AA seq
578 aa
AA seq
DB search
MGRDWSEMLVMESVQNRCCKEQTRELLIATMATSSEEVLLIVKKVRQKKQDGALYLMAER
IAWAPEGKDRFTVSHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERD
AVKDLLQQLLPKFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLN
AGDNSAAPTKQDVGISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENV
PHNMTEREFWTRFFQSHYFHRDRLNTGSKDLFAECAKLDEKGLKTMVSQGVKNPLIDLTA
LEDKTLDEGYGVASVASTSNASKSARESSNAAIIKRFNHHSAMVLAAGLRKQEAQNDHYS
ETSSTDGNSRDSDFFQPPMKKVKLQESIEYEDLAKNNSIKTIALNLKKSDRYYHGPTPIQ
SQQYATSQDIINSFHSIRQEMEAYVPKLTQVLSSGDATSTIAVLSPGGALMQGGTQQAIN
QMVPNDVQSELKHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQE
KIRRQYLSTNLISHIEEMLQTAYNKFHTWQSRRMLKKT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagactggagtgaaatgctggtaatggagagcgttcagaacaggtgttgtaag
gaacagacaagagagctccttatagccacaatggcaacgtcatctgaagaagtgttactg
attgtaaagaaggtacgtcagaagaagcaggatggagctctctaccttatggctgaaagg
atagcatgggcacctgaaggcaaagaccgattcacagtcagccatatgtatgcagacata
aaatgccagaaaatcagtccagaaggtaaagctaaaattcagcttcagctagtattgcat
gcaggggacacaaccaactttcacttctccaatgaaagcacagcagtgaaggagcgagat
gcggtaaaggatcttcttcaacaactgttgcccaagttcaaaaggaaagctaataaagaa
cttgaggagaagaacagaatgctgcaagaagatcctgttttgtttcagctctataaagac
cttgttgtgagccaagtaatcagtgctgaagaattctgggccaaccgtttaagcctgaat
gcaggggataattctgcagcacctactaagcaggatgtgggcatctctgcagcatttctg
gctgatgtacggcctcaaacagatggctgcaatggtctgaggtacaatttgacttcagat
atcatcgaatccatatttcgaacgtatcctgcagtaaaaatgaaatatgcagaaaatgtt
ccacataacatgaccgagagggaattctggacacgattttttcagtctcattatttccat
cgggacaggctcaatacaggctcaaaagacctctttgcggaatgtgccaaactggatgaa
aaagggttaaaaacaatggtgtctcaaggagtaaaaaaccctctgatagatttaacagct
ttggaagataaaacattagatgaaggctatggtgttgcttctgtggcctctacatcaaat
gcctcaaaatccgctagagaaagtagcaatgctgccattataaaacgctttaatcatcat
agtgccatggtccttgcagctggcctcaggaaacaagaagcacaaaatgaccattacagt
gagaccagcagtacggatggaaactccagggattcagatttctttcaaccaccaatgaaa
aaggtgaaactgcaggagtccattgaatatgaagatttagcaaagaataatagcattaaa
actattgcactaaacttaaagaagtctgataggtattatcatggtccaactccaattcaa
tcacagcaatatgcaaccagtcaggatataattaattcttttcatagtattaggcaagaa
atggaagcatatgtacccaaactaactcaggttctttcaagcggtgatgctactagcact
attgcagtcctgtcacctggaggagcacttatgcagggtggaacacagcaagccataaac
cagatggtgccaaatgatgttcagtctgaactaaaacacttgtatgtggcagtaggggaa
ctgctacgacacttctggtcctgctttcctgttaacacgccattcctagaagaaaaggtt
gtgaaaatgaggagcaacttggagagatttcaggttacaaagctctgcccattccaagaa
aagattcggagacagtatttaagcacaaatttgataagtcatatagaagagatgctgcag
acggcctacaataagttccatacatggcagtcccggcgtatgctgaagaagacgtga
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