Calonectris borealis (Cory's shearwater): 142088150
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Entry
142088150 CDS
T11211
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142088150 (CTR9)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
142088150 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
142088150
NCBI-ProteinID:
XP_075019264
LinkDB
All DBs
Position
14:9715163..9737601
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AA seq
1167 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPMSRKKKKRKGSGSEPDGEEEEGERKKKKR
RRPQKADEGSDDEEQENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHTRNSNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVHPSE
DDSDSDRSARKRRRSDSEQSDNESVQSGRSRSGGSENESRPASRSADSDRDSERGSDNEG
SGRGSGNESEPEGSNDEGSEGGSDDSD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggggtctattgagatccctctccgggacactgatgaggttattgagcttgac
ttcgatcagttacctgagggtgatgaagttataagtatactgaaacaggaacacactcaa
ctgcacatatggattgccttagcgctggaatactacaaacaaggaaaaacagaagacttt
gtgaagctgttggaagctgcacgcatagatggtaacttggactatagagaccatgaaaaa
gatcagatgacatgtctggatactctggcagcatactatgtacagcaggctcggaaggag
aagaacaaagataacaagaaggagctcattacgcaagctaccttgttgtatactatggct
gacaaaattattatgtatgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggtgataagatggaccaagctgatgcacaattccattttgtgctcaaccagtctcca
aataatattcctgcccttctcggtaaagcatgcatttctttcaacaagaaagattataga
ggagcccttgcttactacaagaaagcattgcgtaccaatccaggttgcccagctgaggtt
cgattaggtatgggccactgcttcgtgaaactgaacaagttggaaaaagctcgcttagcg
ttcagcagggctctggagctaaattcaaaatgtgtaggggctttggttggactggctgtt
ctggaactcaataataaagaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttc
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccataatacagaa
gttgaagcaatgcaggcagagagttgttatcagctggctaggtcttttcatgtacaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttt
gtacttccattttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgca
tcacaatgctttgaaaaagttttgaaagcctatcctaacaattatgagactatgaaaatc
cttggatctctttatgcggcttcagaagaccaggagaaacgggatattgcgaagggacat
ctaaagaaagtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgcactgtcagcctatggcacagccacacgcatt
ctgcaagagaaagtacaggctgatgtcccaccagagattttgaataatgtgggtgctctg
cacttcaggctgggaaacctaggagaagcgaagaaatattttttggcatcactggatcgt
gcaaaagcagaagctgaacatgatgagcattattacaatgctatctctgtaacaacgtcc
tataaccttgccagactatatgaggcgatgtgtgaatttcatgaagcggaaaagctgtat
aaaaacattttaagagaacatcctaattacgttgattgctacttgcgcttgggagctatg
gctagggataaaggaaatttttatgaggcttctgattggtttaaagaagcacttcagata
aatcaggaccatccggatgcttggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaaacagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctacatcaacccacaaga
gacagagagaaggagaagcgtcatcaagaccgtgcattagcgatctacaagcaagtactg
agaaatgatccaaagaatttgtatgctgctaatggcataggagctgtcttggcacataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacatatctacgtagaacagaaacagtacatcagtgcc
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaatactgaagtattg
ttatatttggcccgggcgctcttcaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtagcgccaagtgatacagtccttatgtttaatgtggctttagtg
ctacaaagactagctacctctgtcctgaaagatgaaaaaagcaatctaaaggaggtgctt
aacgctgtgaaagaactggagctagcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctctgactta
ctgagtcaggctcagtatcatgtggctcgggcacgcaagcaggatgaagaagagagggag
ctgcgtgcgaagcaagagcaagaaaaggagctgcttcgccaaaaactacttaaagaacag
gaagagaagcgcctaagagaaaaagaagaacagaagaaacttctggaacaaagagctcaa
tatgtggagaaaaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggaatttgatgag
ttcgtcaatgatgacagtgatgaagatctgcccatgtctagaaagaaaaagaagaggaag
ggcagtggtagtgaaccagatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccaaaaggcagatgaggggagtgatgatgaagaacaagaaaatggtccaaga
cctaaaaaacgacgtccacccaaagcagagaaaaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggataaactcaaaattgctgatgatggacacactaggaatagcaacagtgat
tcggatgatggggaacagcagcacagtaaacgcattgtttctgatagtgattctgataac
agaaacaaatctggtagcgaggcaggtagtccgaggaggtccagtgtccatccatctgag
gacgattctgacagtgacaggtcggctagaaaaaggaggcggtcagattcagagcagtct
gacaatgagtctgtacagtcggggagaagtcgttccggtggttcagaaaacgaatctcgc
ccagcttctcgcagtgctgactcagacagagattctgagagaggatctgacaatgagggt
tctggcagaggatctggtaacgaatctgaaccagaaggatccaatgatgaggggtctgaa
ggtggttcagatgacagtgattag
DBGET
integrated database retrieval system
