Calonectris borealis (Cory's shearwater): 142088177
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Entry
142088177 CDS
T11211
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142088177 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142088177 (CSTF3)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142088177 (CSTF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
142088177
NCBI-ProteinID:
XP_075019329
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All DBs
Position
14:12411204..12464681
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AA seq
673 aa
AA seq
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MKPVPRCERGLVPPGREHQHWGQLSKNSVSMIKAKNYDKVEKLFQRCLMKVLHIDLWKCY
LSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQR
ITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYE
TVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCL
LVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYF
AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED
ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTR
VLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALL
VDRYKFMDLYPCSASELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKP
DTQQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFR
RCKLPDTVDEAVRIITGGLPEIAVEGNGPVENNAMLNKAVKRPHEDSDDDEEKGSVVPPV
HDIYRARQQKRIR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagtgccgagatgtgagcgcgggttggtccctcctgggagggagcaccagcac
tgggggcagctgtcaaaaaacagcgtctccatgattaaagcaaaaaattatgacaaagtg
gaaaagttatttcagcgatgccttatgaaggttttacacattgatttatggaaatgttac
ctttcctatgtacgagaaaccaaggggaagctacctagttacaaagaaaaaatggctcag
gcatatgattttgctctggataagattggcatggaaatcatgtcataccagatctgggtg
gattacatcaattttttgaagggcgtagaagcagtaggatcttatgcagaaaaccagagg
ataacagctgtccgtagggtttaccagcgtggttgcgtgaatccaatgataaacatagaa
cagctctggagagattataacaaatacgaagagggcatcaatattcacttagctaagaag
atgattgaagacaggagtagagattatatgaacgcacgacgtgtagcaaaggaatatgag
acagtgatgaaaggtctggaccgcaatgctccctctgtccccccacaaaataccccacaa
gaggctcagcaggtagacatgtggaagaaatacatccagtgggaaaagagcaatcctctg
cgtacagaagatcaaactctcataacaaaaagagttatgtttgcctatgagcaatgcctt
ttggttctgggacatcacccagatatctggtatgaagctgcacagtacctcgagcaatct
agtaagctgctagctgaaaaaggggacatgaacaatgctaaacttttcagtgatgaggct
gctaatatttatgaaagagcgatcagcactttattaaagaagaatatgcttctttatttt
gcatatgcagattatgaagagagtcgaatgaagtatgagaaagtacacagcatatataac
cgactcctggctattgaagacattgatcccaccctggtttatatccaatatatgaaattt
gcaaggcgagcagaaggcataaaatctggaagaatgatatttaagaaagcaagagaggat
gcccggacccgccatcacgtctatgttacagcagctttaatggagtattattgtagtaag
gataagtctgtggcctttaagatttttgagctagggctgaaaaaatatggggacattcca
gaatatgtactggcatatatcgactacctttctcaccttaatgaggacaataataccaga
gttttgtttgaacgtgttttaacttcagggagccttccacctgagaaatctggggaaatc
tgggctcggtttttagcttttgaaagtaacattggtgatctagctagtatactgaaagtt
gaaaaacggaggtttacggcattcaaggaagaatacgagggtaaagaaacagctctgctg
gtagacaggtacaagttcatggatttgtacccttgctctgctagcgaactgaaggccctt
ggttacaaggatgtctcccgtgccaagctggcagctataattccagaccctgtggttgca
ccttccatcgtgcctgttctcaaagatgaagtagacagaaaacccgaatatccaaaaccg
gacactcagcagatgattccatttcagccaagacacttagcacctccaggtttacatccc
gtcccaggtggtgtctttcctgttccaccagcagctgtagttctcatgaagctcctgcca
cctcctgtttgttttcagggtccctttgttcaagtggatgagctcatggagatatttaga
agatgcaaactgccagacactgttgatgaagctgtacgaataattaccggaggcctacct
gaaatagctgtggaaggcaatggacctgtggaaaataacgctatgctcaataaggctgtt
aagagaccacatgaagattctgacgacgatgaggagaaaggatctgtagttccccctgta
cacgacatttacagagcacgacagcagaagagaatccggtga
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