KEGG   Calonectris borealis (Cory's shearwater): 142088177
Entry
142088177         CDS       T11211                                 
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
  KO
K14408  cleavage stimulation factor subunit 3
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    142088177 (CSTF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbor03019]
    142088177 (CSTF3)
Messenger RNA biogenesis [BR:cbor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     142088177 (CSTF3)
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C
Other DBs
NCBI-GeneID: 142088177
NCBI-ProteinID: XP_075019329
LinkDB
Position
14:12411204..12464681
AA seq 673 aa
MKPVPRCERGLVPPGREHQHWGQLSKNSVSMIKAKNYDKVEKLFQRCLMKVLHIDLWKCY
LSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQR
ITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYE
TVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCL
LVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYF
AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED
ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTR
VLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALL
VDRYKFMDLYPCSASELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKP
DTQQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFR
RCKLPDTVDEAVRIITGGLPEIAVEGNGPVENNAMLNKAVKRPHEDSDDDEEKGSVVPPV
HDIYRARQQKRIR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaaaccagtgccgagatgtgagcgcgggttggtccctcctgggagggagcaccagcac
tgggggcagctgtcaaaaaacagcgtctccatgattaaagcaaaaaattatgacaaagtg
gaaaagttatttcagcgatgccttatgaaggttttacacattgatttatggaaatgttac
ctttcctatgtacgagaaaccaaggggaagctacctagttacaaagaaaaaatggctcag
gcatatgattttgctctggataagattggcatggaaatcatgtcataccagatctgggtg
gattacatcaattttttgaagggcgtagaagcagtaggatcttatgcagaaaaccagagg
ataacagctgtccgtagggtttaccagcgtggttgcgtgaatccaatgataaacatagaa
cagctctggagagattataacaaatacgaagagggcatcaatattcacttagctaagaag
atgattgaagacaggagtagagattatatgaacgcacgacgtgtagcaaaggaatatgag
acagtgatgaaaggtctggaccgcaatgctccctctgtccccccacaaaataccccacaa
gaggctcagcaggtagacatgtggaagaaatacatccagtgggaaaagagcaatcctctg
cgtacagaagatcaaactctcataacaaaaagagttatgtttgcctatgagcaatgcctt
ttggttctgggacatcacccagatatctggtatgaagctgcacagtacctcgagcaatct
agtaagctgctagctgaaaaaggggacatgaacaatgctaaacttttcagtgatgaggct
gctaatatttatgaaagagcgatcagcactttattaaagaagaatatgcttctttatttt
gcatatgcagattatgaagagagtcgaatgaagtatgagaaagtacacagcatatataac
cgactcctggctattgaagacattgatcccaccctggtttatatccaatatatgaaattt
gcaaggcgagcagaaggcataaaatctggaagaatgatatttaagaaagcaagagaggat
gcccggacccgccatcacgtctatgttacagcagctttaatggagtattattgtagtaag
gataagtctgtggcctttaagatttttgagctagggctgaaaaaatatggggacattcca
gaatatgtactggcatatatcgactacctttctcaccttaatgaggacaataataccaga
gttttgtttgaacgtgttttaacttcagggagccttccacctgagaaatctggggaaatc
tgggctcggtttttagcttttgaaagtaacattggtgatctagctagtatactgaaagtt
gaaaaacggaggtttacggcattcaaggaagaatacgagggtaaagaaacagctctgctg
gtagacaggtacaagttcatggatttgtacccttgctctgctagcgaactgaaggccctt
ggttacaaggatgtctcccgtgccaagctggcagctataattccagaccctgtggttgca
ccttccatcgtgcctgttctcaaagatgaagtagacagaaaacccgaatatccaaaaccg
gacactcagcagatgattccatttcagccaagacacttagcacctccaggtttacatccc
gtcccaggtggtgtctttcctgttccaccagcagctgtagttctcatgaagctcctgcca
cctcctgtttgttttcagggtccctttgttcaagtggatgagctcatggagatatttaga
agatgcaaactgccagacactgttgatgaagctgtacgaataattaccggaggcctacct
gaaatagctgtggaaggcaatggacctgtggaaaataacgctatgctcaataaggctgtt
aagagaccacatgaagattctgacgacgatgaggagaaaggatctgtagttccccctgta
cacgacatttacagagcacgacagcagaagagaatccggtga

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