Calonectris borealis (Cory's shearwater): 142088236
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Entry
142088236 CDS
T11211
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cbor Calonectris borealis (Cory's shearwater)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
SH3_2
Ank_5
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
142088236
NCBI-ProteinID:
XP_075019488
LinkDB
All DBs
Position
14:complement(18363291..18679348)
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AA seq
1878 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSVDSESDSSKEETIYDTIRATAEKPSSRMEDSQSNTLVIRI
IIPDLQQTKCIRFNPEASVWVAKQRILCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERL
LREYPQPVNKGVPSLEFRYKKRVYKQFNLDEKQLAKLHTKANLRKFMDHVHHLSVEKITK
MLDRGLDPNYHDLESGETPLTLAVQLDNTVEVIKALKNGGAHLDFRAKDGMTALHKAARA
KNQVTLKTLLELGASPNYKDSCGLTPLYHTAIVGGDPYCCELLLHEHATVSCKDENGWQE
IHQACRYGHVQHLEHLLFYGADMCAQNASGNTALHICALYNQESCARVLLFRGANKEIKN
YNSQSPFQVAIIAGNFELAEYIKNHREADIGSCFPYPSRSPWNLLLAVPFREAPTYSNRR
RRPPSTLAAPRILLRSNSDNNLNINNLPEWSAASSASSHRSLSPHLLQQMQNNPNGTVKT
VGSYTPSSRSRSPSLNRLGEDAKRQQHRHISAVYNPSANKDTLSALDYQGPKRKLYSAVP
GRLFIVVKPYQPQGEGEIHLHKGDRVKVLSIGEGGFWEGSTRGHIGWFPAECVEEVQCKP
NESKPETRTDRTKKLFRHYTVGSYDSFDASSDCIIEEKAVVLQKKDNEGFGFVLRGAKAD
TPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQ
GGNHLVLKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRK
KKDILPSHFEGLKKRIVFRVTLNKVDEIVPVSKPSRIADNATVDSRVATIKQRPSSRCFP
SATDMNSMYERQGIAVMTPTVPGSPQGPFLGIPRGTMRRQKSIGITEEERQFLAPPMLKF
TRSLSMPDTSEDIPPPPQSLPPSPPPPSPSLYNSPKSPTSRSYGTIKPPFNQNSGSKISL
VRPENVGTMIRDKGIYYRRELDRYSLDSEDLYSRSAATQANFRTKRGQMPENPYSEVGKI
ASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEI
DPQSSEQPGQLRPDDSLGVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLT
PPTPRMRQSKFTDEAMFSSEDGFRQLMSPSPIPAPREPENLFNSSEPSNQSDSRTLNASS
KTKGTENSTVAAKSTNASSSDNYVHPVTGKLLDPNSPLALALSARDRAMKEQTQQIPGKG
DAVKADLNKPLYIDTKLRPNIETTFPVTATVARQNTRGPLRRQETENKYETDAGKEKKAE
EKKNMLINIVDTSQQKSAGLLMVHTVDTAKSDDTPEDEEEKSAEMEPNPENSPPERPEGS
EEADSELNVPAAPEPPASPCKTIVAASSVDDPVILPFRIPPPPLASVDIDEEFIFTEPLP
PPLEFANSFDIPDDRAAPGSALTDLIKQRKNGTPSPAPFAPSQSTNSLDSKKQVGLSNCL
PASFLPPPDSFDNVTDSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENVDTCTV
YADGQTFLVDKPPVPPKPKMKPIINKSNALYKDALIEETVDSFVIPPPAPPPPPISAQPN
MAKVVPQRTSKLWGDMTEVKSPILSGPKANVISELNSILQQMNREKSSKPGEGLESPTGT
KTASLSTRSTEVMSTVSGTRSTTITFTVRPGTSQPITLQSRSPDYDSRTSGARHAPSPVV
SPTEINKDIMPTPLTASASASSPSPTLSDVFSLPSQPPSGDLFGLTTGRSRSPSPSILQQ
PISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFMDNEIDGTHLPNLQKEDLIDLGVT
RVGHRMNIERALKQLLDR
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtagcccaacatcaagtgaagatgaaatggcacaaagcttttccgactattct
gttgactctgaatcagacagctccaaagaagaaactatttatgacacaattagagcaact
gcagaaaagccaagcagcagaatggaagacagtcagagcaacacattagtgattcgaatt
ataatacccgatctgcagcaaacaaaatgcattagatttaacccagaagcttcagtgtgg
gttgcaaagcaacgaattttgtgcactttgaatcagagtttgaaagatgtcctgaattat
ggactgttccagcctgcaagtaatggtagagatgggaagtttttggatgaggagcgactt
cttagggaatacccacagccagtgaataaaggagttccttcactagagtttcgatacaag
aaaagagtgtacaagcagttcaatcttgatgaaaaacagctggccaagcttcatacgaag
gctaatttgagaaaatttatggatcatgtccaccatctctcagtggaaaaaatcacaaag
atgttggaccgaggactggacccaaactatcatgatctagaaagtggagaaacaccccta
actttggcagttcagcttgacaatacagtagaagtgataaaagctctgaaaaatggagga
gcacatttggatttcagagccaaagacggaatgacagctctgcacaaagcagccagagcc
aagaaccaagtaaccctcaagacccttttagagcttggagcatctcctaactacaaagac
agctgtggcctgacaccactgtaccacactgctattgtgggaggggatccttactgctgt
gaactgttgcttcacgaacacgctacagtcagctgcaaagatgagaatggatggcaagaa
attcatcaggcttgccgatacggacacgtccaacatctagagcacctcctcttctacggc
gccgatatgtgtgcgcagaacgcctcgggaaacacggcgctgcacatctgtgccctctac
aaccaggagagctgtgcaagagtgctgctgttccggggagccaacaaggagattaagaat
tacaacagccagtctccgtttcaggtggctataatagcgggaaattttgagctcgctgaa
tatatcaagaatcacagggaagctgatattggatcctgcttcccatatccaagtagaagt
ccctggaatctgttgctggcagtgccctttagagaggctcccacctattcaaacagaagg
cggagacccccgagcaccttagcagcacctcggatcttgctccgttccaacagcgacaac
aatctgaacatcaacaacctccctgagtggtcagccgcctcctctgcttcttcacaccgc
agcctttcacctcatctacttcaacagatgcagaataatcctaatggaactgtaaaaact
gtgggcagttacactccgtcctcccggagccggtcgccatccctaaacaggctgggagag
gatgccaaacggcagcagcacaggcacatcagtgccgtttacaatcctagtgccaacaag
gatactctgtctgccttggattatcagggtccaaaacgcaagctttacagtgctgtacct
ggaagactttttattgtcgtaaagccatatcaacctcaaggagaaggggaaattcatctg
cacaaaggagatagagtcaaagttttaagcattggtgaaggtggattctgggaaggcagc
acccggggacatattggatggtttcctgcagaatgcgttgaagaagttcagtgtaaacca
aatgaaagcaaaccagaaacacgaacagatagaacaaagaaactgtttagacactacaca
gttggatcctatgacagctttgatgcttcaagtgactgcataatagaagaaaaggcagtg
gtcctgcagaaaaaagacaatgaaggatttggatttgtgctcagaggggcaaaagctgac
acaccaattgaagaattcaccccaactccagcctttcctgctttgcagtacttggaatct
gtggatgaagggggagtagcatggcaagctggcctgagaactggagactttttgatcgag
gttaataatgagaatgtagtgaaagttggccacaggcaggtggtgaacatgattcgacaa
gggggcaatcacctagttcttaaggttgtcacagtaaccaggaatcttgatccagatgac
acagctaggaagaaagccccaccacctcctaagcgagctccaaccactgcactgaccttg
cggtctaagtcaatgacctcagagcttgaagagcttgtggataaagcttcagtacggaag
aagaaggatattctcccttcacattttgaaggtttgaagaagaggattgtttttcgagtc
acactaaataaggtggatgaaatagtaccagtttccaagccatcaagaattgcagacaat
gcaactgtggactcaagagtggcaactattaaacagcggccttctagtagatgttttccc
tcagctacagatatgaattccatgtatgagagacagggtattgctgtgatgacgcccact
gtaccagggagtcctcaaggtccttttctgggtatacctcggggtacaatgagaagacaa
aaatctataggaataacagaggaagaacggcagtttttggctcctcctatgctgaagttt
accagaagtctttcaatgcctgacacctctgaagatatcccaccaccgccacagtcctta
cctccttcaccaccaccaccttctccctctctgtacaactctcccaaatccccgacgtca
aggagctatggaactattaaacctccatttaatcagaattcaggttcaaaaatttctttg
gttaggcctgagaatgtgggaacaatgataagggacaaagggatctattacagacgagaa
ctggaccgatactctctggactctgaagacctgtacagtcggagtgccgcaactcaggca
aatttcaggaccaagaggggtcagatgccagaaaacccgtattctgaggtggggaagatt
gcaagcaaagcagtttacgtgccggccaaaccagcgaggcggaaggggatgctggtgaaa
caatccaatgttgaagacagtccagaaaagacctgctctattccaatcccgacaattatt
gtgaaagagccatccaccagcagcagcgggaaaagcagccaagggagcagcatggaaatc
gatcctcagtcttcagagcaacctgggcaactccgacccgacgatagcttaggtgtcagc
agtccgtttgcagcagccattgctggagcagtgagggacagggaaaagaggctggaagca
aggcgtaattctccagccttcctttccacagacctaggggatgaggatgttggactaacg
ccaccaacaccacgtatgaggcaatctaaatttaccgatgaagcaatgtttagtagtgaa
gatggttttagacagctcatgtcaccatctccgattcctgcaccgagagagcctgaaaat
ctttttaatagcagtgaacccagcaatcaaagtgattcaaggacattaaacgcatcgtcc
aaaacgaaaggtactgaaaacagtacggtggcagctaagtccacgaatgcatccagctca
gataattacgttcacccggtcacaggaaagctattagatccaaactcaccactagccctc
gctctctctgccagggacagagccatgaaagaacaaacacagcagattccaggcaaagga
gacgctgttaaagctgaccttaataaaccactttacatcgatacaaagctgagacccaat
attgaaacgacttttcctgttactgctactgtcgctaggcaaaatactcgtggcccattg
agacggcaagagaccgagaacaagtatgaaacagatgcagggaaagaaaagaaagctgag
gagaagaaaaacatgttgataaacattgtggatacttcgcagcaaaagtcagctggcttg
ttaatggttcataccgtggacacggcaaagtcagatgatacgcccgaagatgaagaggaa
aagagcgctgaaatggaaccgaaccctgagaactccccaccagagaggccagaggggagc
gaggaagcggacagtgagctgaacgtgcctgctgcgcctgagccaccggcatctccctgc
aaaaccatcgtagcagcgagctctgtcgacgaccctgtcatcttgcccttccgcatccct
ccgccacccttagcatcagtggatatcgatgaagagtttatttttactgagccactacca
ccccccttagagttcgccaacagcttcgatatccccgacgaccgcgcggctcccggttcg
gctctaacagacttgattaagcaaagaaaaaatggcacgccttcacccgcaccatttgcc
cccagccagtcaacaaattccttagacagtaaaaagcaagtgggtctttcaaactgtttg
cctgcctcctttctgccaccccctgacagctttgataacgtcactgactctgggattgag
gaggtagacagtcgaagtagtagtgaccatcacttagagacaaccagcactatctcaacg
gtgtccagcatctctaccttatcctcggaagggggtgagaacgtggatacttgtacagtc
tatgcagatgggcaaacatttctggtggacaaacccccagtacctcctaagccaaaaatg
aagcccataatcaacaaaagcaatgcactttacaaggatgcgctaattgaagaaactgta
gacagctttgttattcctcctcccgctccgcccccacctccgatcagtgcacagcccaat
atggctaaagttgttccccaaaggacatctaagctatggggtgacatgacggaggtgaaa
agcccaattctctcaggcccaaaggctaatgttattagtgaattgaactcaatactccag
caaatgaacagagagaaatcctcaaagccaggggaaggattggagtcacctactggaaca
aaaactgcaagtctcagtacaaggagcacggaagtcatgagtactgtctcaggtacacga
agtacaacaatcacttttactgtccgacctggaaccagccagccgatcacactgcagagc
aggtccccagactatgacagtaggacctcaggagcaagacatgctccaagccctgtggtt
tcaccaacagagattaataaagacatcatgcctactcctctgactgcttctgcttcagct
tcatctccttctccaactttgtccgatgtatttagcctacccagccagcccccttctggg
gacttatttggcttgaccacagggcgcagcaggtctccttctccctcaatattacaacag
ccaatctcaaataagccttttacaactaagcctgtccacctgtggactaaaccagatgtg
gcagattggttggaaagtctaaacttaggtgaacataaagaaacattcatggacaatgaa
atagatggcactcatttaccaaatctacaaaaggaagatctgatagaccttggagtgact
agagttgggcacagaatgaacatagaaagagctttgaaacagctgctggacagataa
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integrated database retrieval system