Calonectris borealis (Cory's shearwater): 142088680
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Entry
142088680 CDS
T11211
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142088680 (GEMIN5)
03041 Spliceosome [BR:
cbor03041
]
142088680 (GEMIN5)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142088680 (GEMIN5)
mRNA cycle factors
P-body specific factors
142088680 (GEMIN5)
Spliceosome [BR:
cbor03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
142088680 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
WD_LRWD1
TPR_IF140-IFT172
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
142088680
NCBI-ProteinID:
XP_075020345
LinkDB
All DBs
Position
15:complement(12586148..12605012)
Genome browser
AA seq
1535 aa
AA seq
DB search
MAAAVAGVRVLPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVSAAAPAFYGELIGHT
DRISGFTFCHCPGQSSLCASSSDDGSVKIWDTEALAAVGEYSLHQNTISALHWSPLVKDL
IVSGDEKGIIVCYWHNRSDSQQFFPEPRTIFCLTCSPHHENLVAIGYKDGMVVIIDISRK
REVLHRLRGHDDEIHCLAWCPLPGEERLPAWQDELQVVPSEEGKVPNGELTQDAAMKKGC
YLASGSKDQTIRIWSCTRGRSVLTLKLPPTKRRGGAVDPAVKERIWLTVHWPSGRSSEIV
SSCFGGELLLWDLTQSGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDKELLFSISMDRDVK
CWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSMNNIYDVKTFW
QSIKSKVTALSWHPTKEGCLAFGTDDGKVGIFDTFSSNAKNKPPQISSTYHKKTVYTLVW
GPPTPPLSSGGEGEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPA
RTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGSQPELSN
LIASGSINATIYVHNLKSVIESTSESPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSA
CYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDSVYTGADDFSVHKWHISKQEHT
LPPQGRKSIELEKKRSMQPKVKTKKKKKPIGKSPAKQDLSDAMNGDESAKEMLLEENGVS
DHEGEKEAQETELPDKVSMTVSKDTSSSAYDYSSFSLPMHFVTQKATPVKKDPPKEKPTP
DASLKKRKPRSILPFSTFMDHRSKDELHQDCLRLATCLKTKDNNEDESPDLKDRIHLGLF
TDRASLHKMIDVEGKHHLENGHPELFQQLMLWKGDMKGVLQAAAERGELTDQLVAISPMV
GYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAVELLKVNHFYREAIVIAKARLR
PEDPILRDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLAKKGDVTSLKTAAELAL
ISGEEELSATLSFRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCKCLSERNP
CDRKSPVPPCYHSWELNREASFFDMVIEVWQNVLGMDTTEQATCAREQLRSIEHPPSTSN
THPKQVLFHISHDLTLASLSYQAATWDEAVKSILGAVTRSYDAGNFTLMQEICSIILPEG
CDNLRHKLDSTNSQSMDACRSLEGFVAYGLLYDLWWNPPKDSLVLQKAVLDPVLCPSEQT
ALEKSGVSGQSSFEETPDQTAVEMDENLCNTTEVRRCETESDSRTSSVNLVDRQSKLNGC
KVLLSEEIAALQNTQRDIAEVQQILADMIRQHQQQRNNLQENTNGSTQESNMQQSSETES
DKPCSGSSQMNCKDEVKEPIMLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLH
IGPQCPPALHEEALDLLRKHGSASLHKKAGRRFLT
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagtggcgggggtgcgggtgctgcccgcctcgcccaactggtacagcagc
cgctgcagcgacgccagcagcgatggccgcctcttcggcttcgcggcgaggcaccgcgtc
tgcctgctggatgtcagcgccgccgcacccgcgttttacggagagctcatcgggcacacg
gaccggatctccgggttcacgttttgccactgccccgggcagagcagcctctgcgccagc
agctccgacgacgggagcgtcaaaatctgggacacggaggccctggctgcggtgggggag
tacagcctgcaccagaacaccatctcagcgttgcactggtcaccccttgtgaaagatttg
attgtatctggtgatgaaaaaggtataattgtttgttactggcataacagaagtgacagc
cagcagttcttcccagagcctcggacaattttttgtctcacttgttctcctcaccatgaa
aacctggtggcaattggctacaaggatggcatggtggttataattgatatcagcaggaaa
agagaagttcttcatcgcctaagaggccatgacgatgaaatacattgtctggcctggtgc
cctctgcctggtgaagaaaggttacctgcttggcaagatgagctccaagtagttccttca
gaggaaggcaaagttccaaacggggagctgacacaggacgcagccatgaagaaaggttgt
tacctggcttcaggaagcaaagatcagaccatacgaatatggagctgtactagaggcaga
agtgtattgactttgaagttgccacccacgaagagaagaggtggagccgttgatcccgct
gttaaagagcgcatttggctgactgttcactggccttctggtcgttcctcagaaattgta
tccagctgttttggaggagaactgctactctgggatttgacccaatctggaaaacgcaag
tggactcttctaggatcttcagaaggacaaaatcactcccgtattgtgttcaatctgagt
tccgtgaagcatcaagacaaagagctccttttttccatttcaatggacagagatgtgaag
tgctgggacctgtcaactctcgattgtagctggactatgccctcgcttgggggatttgtc
tatagtcttgccttctccccagtggacacaggctgtcttgccatcggtgttggagacagc
atgatccgggtgtggaatactttgtccatgaacaatatttatgatgttaaaaccttctgg
caaagcataaagtccaaggttacagcattatcctggcatccaactaaggaaggctgcttg
gcctttggaacggatgatggaaaagttggcatatttgacaccttctccagcaatgctaag
aataagccacctcagatctccagtacttaccacaagaagactgtatacacattagtctgg
gggcctccaactcctcctctgtcttctggaggagaaggtgaacagccctctgtaacgtta
tatagttgtgctggagaaggtattgtttttcaacacaacccctggaagcttaatggagag
gcaaatgacatcaacaaagtcatccgagacactaattcaatcaaacacaaactgcctgca
cgtacagagatcagctggaaaccagatggcaaactcttggctcttggcaatgaagatggc
tcaattgaaatatttcaggcgccaaacttgaagttgctctgcactatccagcaacatcat
aaactgattaacgccattcgttggcatcatgagcatgggagccagccagagctgagtaac
ttgatagcttcaggctcaatcaatgccactatttatgtgcataatctgaagagcgtcata
gagagcacttcagaaagtcctttgacaataacagagccttttcgaactctggctgggcac
acagctaaaatcacaagtctttcttggagcccccaccatgagggaagattggtatctgct
tgctatgatggcactgcacaggtatgggatgttatgaaggaagagccactctgcaactac
cgagggcaccagggccggctactgagtgtccagtggtcaccagtggattcagattctgtt
tatacaggagcagatgatttttctgttcacaaatggcacatctcaaagcaggagcataca
ctgcctccgcagggcagaaagagtatagaattagagaaaaaaagaagtatgcaaccaaaa
gtcaaaaccaagaagaagaaaaagcctataggaaagagtccagccaagcaggatctaagt
gacgccatgaatggagatgagagcgcgaaggaaatgttactagaggaaaacggagtgtcg
gaccatgaaggagaaaaagaagctcaggagacagagttgcctgataaagtctccatgact
gtgtccaaggatacatcttcatctgcatatgattattcttcattcagcttgccaatgcat
tttgtgacccagaaagccactcctgtgaaaaaggatccacctaaagagaaaccaactcct
gatgcctctctgaagaagaggaagcctcgttctattctacccttcagcacattcatggat
cacagatcaaaagatgaattgcatcaggactgcttgaggctggctacatgtctgaaaacc
aaagataataatgaagatgagtcccctgacctcaaggatcgcatccacttggggctgttc
acagacagggcttctctacacaagatgattgatgtggaaggaaagcatcacctggagaat
gggcatccagagctctttcagcagcttatgttgtggaaaggagatatgaagggtgtcctc
caggcagctgccgagaggggagagctaacagaccagctggtagcaatctcgcccatggtt
ggatatcaggcctgggtttggacagtagaagcctttgcgaagcagctgtgttttcaggag
caatatgtgaaggctgcctcccatctcctgtccatccataaagtgtatgaggctgttgag
ctcctgaaagtgaaccatttttacagggaagcaattgtaattgctaaggccaggttgcgt
ccagaagatccaattctgagggatctctacaccagttgggcagctctgttagagaaagat
ggtcattattccatggctgccaaatgttatttgggggcttcctcaccctatgatgcagtt
aaggtgttggcaaaaaagggggatgtgacatcccttaaaactgctgctgagcttgcgctg
atatctggagaggaggagttgtcagcaactttgtctttcagatgtgcccaagacctgctg
ttatccaggaactgggtgggagctcaggaagtccttcagcaacataaaactttatttgga
caaagacttgttttctgccttaacgaactgctttgcaagtgccttagtgaaagaaatccc
tgtgaccgaaagagccctgtgcctccctgttatcacagctgggagctgaacagagaggcc
tcattttttgacatggtgatagaagtgtggcagaatgtattgggcatggacaccactgaa
caagccacatgtgcacgggagcagctgcgcagtattgagcatcctccttctaccagcaac
acacacccaaagcaggtgcttttccatatttcccatgacctgacccttgcatccctgagc
tatcaggctgctacctgggatgaggcagtgaaaagtattcttggcgctgtgacccgcagt
tatgatgctggtaatttcactctgatgcaagagatttgcagtatcatccttcctgaaggc
tgtgataacctgagacacaaactggacagcacaaattctcagagcatggacgcttgcaga
agtttagagggctttgtggcttacggactgctgtacgatctgtggtggaacccacccaaa
gactcccttgtcttgcaaaaggctgtgttggatcctgtgctgtgtcccagtgagcagaca
gctcttgagaagagcggtgtctcaggtcaatcctcctttgaagaaactcctgatcaaact
gcagttgagatggatgaaaacctctgcaatacaacggaagttcgtaggtgtgagacagaa
agtgactcaagaactagctcagtcaatttggtagacagacagtcaaaactgaatggctgc
aaagtgcttctttcagaagagattgctgctttacagaacacccagagagatatagctgag
gtccagcagattttagcagatatgatccgccagcatcagcaacagaggaacaatctccag
gaaaacacaaatggaagcacccaggaaagcaacatgcagcagagttcagagactgaatca
gacaaaccatgctctggcagcagccagatgaattgtaaagatgaagtaaaggaaccaatt
atgctccctgagctaacgaagcagcttctaaaagcaaagcagaaactagcagaatttcca
gacaatttaaaggtcttcccattccccgacgtgctggagtgctgccttgtactccttcac
attggaccccagtgccctcctgcactgcacgaagaggcattggatctccttaggaaacac
ggtagtgctagtcttcacaaaaaggctggcagaaggttcttgacatga
DBGET
integrated database retrieval system
