Calonectris borealis (Cory's shearwater): 142088695
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Entry
142088695 CDS
T11211
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142088695 (SOX30)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
142088695 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
142088695
NCBI-ProteinID:
XP_075020389
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Position
15:complement(13416634..13426148)
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AA seq
662 aa
AA seq
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MERRARERPLRSGAPPEPPPGPRRPSMPPPQGETRGPLRVLHIKVEEPEPAEGDSPGCRG
DSRGAGDEFACSLAPWGGKEEARVAIKRERDHERGSGESQNEVQVPEKRGNGKEPWRGAA
VKVEPPDVAFEACRVKMEKDDAPAGSLCGPAHASTDDRKAQLCEGFGILPEDLKIPVVFH
PLPPGTRIQIQGPLPSELIHVTKVPVKQVPLKMQSLLEPSVKIETKNVPLTVLPSDSGMP
DTPFSRDKSGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWSKLTEEQKQP
YYDEAQKIKQRHREEFPGWVYQPRPSKRKLPVSAVFSSASQSIIATNPAGICSFQSPAYS
VVIPNVKNSIGHPVCESPSAIRLPAPSIQHAGPITLFQTTNASTASVAVPAPTLPLRPVI
SPQHFAEPAQTEALDVSSGLNCSLKRPTPVFIESFSRNPSNLTTTNGRFSVSNSEPPKEY
PGLSIFPRGISLPQATPFLHSHLYESPPIGQPASLFGIPPRFSFHHPYFAPGPHYFPSST
CPFSRPPFGCGNFSRSVPEYLGFYEDRYQRQEVMFSALNGDYPFKEYPEESIREDHRSCE
SLEVVSCHNSCNEERYLSPLPQLDVGALEEVLSATPSTPSSIHLVNVTDSDEEEEVKLLR
EL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagggcgagggagcgcccgctccgctccggggctcccccggagccgcccccg
ggcccccgccgtccctcgatgccccccccgcagggggagaccaggggccctctcagggtg
ctgcacatcaaagtcgaggagcccgagccggcggagggagattccccgggctgccgcggg
gacagcagaggggcaggggacgagttcgcgtgctccttagctccgtgggggggtaaagag
gaggcccgcgtcgccatcaaaagagaaagggaccatgaaaggggcagcggagaaagccag
aacgaggtgcaggtgccggagaagagggggaatgggaaggagccctggagaggagccgct
gtcaaagtggagccgcccgacgtggcctttgaggcctgcagggtgaagatggaaaaggac
gatgcccccgctggctccctgtgtgggcctgctcatgccagcactgatgaccgcaaggcg
cagctgtgtgaggggtttgggatcctccccgaagatctgaagatcccagttgtgtttcac
cccttacctccagggacccgcatacagatccaaggccctctgccgtcagagctgatccat
gtgactaaagtgccagtgaaacaagtgccgcttaaaatgcagtctttattggagccttca
gtaaagattgaaactaaaaatgttcccctcacagtactgccctccgattcaggtatgcca
gatactccatttagcagagacaaaagtggccacgtaaagcgtccaatgaacgcatttatg
gtgtgggctaggattcatcgtcctgccctagcaaaagctaacccagctgccaacaatgca
gaaatcagtgttcagcttggattggagtggagcaaactgactgaagagcagaagcagccc
tattatgatgaagctcagaaaataaaacaaaggcacagagaggagtttcctggttgggtt
tatcaaccacgaccaagcaaaaggaagctgcctgtctctgctgtgttttccagcgcttct
cagagtatcatcgctacaaacccagctggcatttgttccttccagtcacctgcttactct
gtcgtcatccccaatgttaagaacagtattggacatccagtctgtgagtctccttctgcc
atccgtctgccggctccttccattcaacatgctggtccaattactcttttccagactact
aatgcaagcaccgcatcagtggctgttccagctccaaccctgcccctgcgccctgtgatt
tcaccacagcactttgcggaacctgctcagacagaagctcttgatgtatcatctgggctc
aattgctctctgaagagacctacaccagttttcattgagagcttcagcagaaacccaagt
aacttaaccaccactaatggcagattttctgtctctaatagtgagcccccaaaggagtac
ccagggctttctatttttcctagaggtatatctcttccccaagctaccccctttcttcac
tcacatctctatgagtctcctcccattggtcaaccagccagtctgtttggaatacctcct
cggttttcgtttcaccacccttactttgcacctggacctcactatttcccctcaagcaca
tgtccattcagccgacctccgtttggctgtgggaatttctccagatcagtgcctgaatac
cttggcttttatgaagacaggtaccaaagacaggaggtgatgttttcagctctgaatgga
gactatcctttcaaggaatacccagaagaaagtatacgtgaggaccaccgcagctgtgag
agccttgaagtagtgtcctgtcacaacagctgcaacgaggagcggtatttaagcccccta
ccacagctggacgtgggagcattggaggaggttttgtcagccaccccatctactccctcc
agcatccacctagtcaatgtaactgacagtgatgaggaagaagaagtaaagttgttgcga
gaattgtaa
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