Calonectris borealis (Cory's shearwater): 142088700
Help
Entry
142088700 CDS
T11211
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142088700 (EBF1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
142088700 (EBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
142088700
NCBI-ProteinID:
XP_075020397
LinkDB
All DBs
Position
15:complement(13828375..14119768)
Genome browser
AA seq
592 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgccagc
acggccgctcagagcggagtgggtctggcccgggctcacttcgagaagcagcctccgtcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgaaaagaccaacaacgggatccactaccgcctgcagctgctctacagcaacgggatc
agaacggagcaggatttctacgtccggctcatcgactccatgaccaagcaggcgatagta
tatgaaggccaagacaagaacccagaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaagtttttcctcaaatgtaaccaaaattgcctaaaa
aatgcaggaaaccctcgagacatgcgtcgattccaggttgtggtgtctacaacagtcaat
gttgatggccatgtgttggcagtgtcggacaatatgtttgtacacaacaattccaagcac
gggcggagagctcgaagacttgatccctcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctg
gtttggagtgagctgattactcctcatgccatccgcgtacagacacctccccgacatatc
ccaggggttgtagaagtcacattgtcctacaagtctaagcagttttgcaagggaacgcct
ggaagattcatttacacagctctgaacgaacctaccattgactatggtttccaaaggtta
cagaaggttatcccccggcaccctggtgaccccgaacgcttgccaaaggaagtaatactt
aagagggctgctgatttagtagaagcactctatggtatgccacataataaccaggaaata
atcctgaaaagagcagcagacatcgcagaagcactctacagtgtcccccgcaatcacaac
cagctccccgcccttgctaacacgtcagtccatgcaggaatgatgggagtgaattccttt
agtggtcaactagctgtcaatgtttccgaagcctcacaagccaccaatcagggttttact
cgcaactcaagcagcgtgtcacctcatggctatgtgccaagcaccacccctcagcagaca
aattataactctgtcacaacaagcatgaatggctatgggaatgctggaatgtcaaattta
ggcggttctccaaccttcctgaatggatctgctgccaattctccctatgccattgtgcca
tcaagtccgacaatggcctcctccactagcctcccctcaaactgtagcagttcctctggg
attttctccttctcaccagccaacatggtctcagcggtgaaacagaagagtgcttttgcg
cctgttgtgagaccgcaaacttctcctcctcccacctgcaccagcaccaatggcaatagc
ctgcaagctatatctggcatgattgttccccccatgtga
DBGET
integrated database retrieval system
