Calonectris borealis (Cory's shearwater): 142088705
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Entry
142088705 CDS
T11211
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
cbor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142088705 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
142088705 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142088705 (THOC3)
03041 Spliceosome [BR:
cbor03041
]
142088705 (THOC3)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
142088705 (THOC3)
Spliceosome [BR:
cbor03041
]
Complex C
Other components
EJC/TREX
142088705 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142088705 (THOC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
DSE1_N
Beta-prop_WDR36-Utp21_1st
eIF2A
Beta-prop_TEP1_C
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
RMC1_N
NBCH_WD40
Tricorn_2nd
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
TRM82_WD
B-prop_COPA_B_2nd
PAC11
Beta-prop_EIPR1
Beta-prop_SPT8
ASA1
PD40
Beta-prop_WDR75_1st
Peptidase_S9_N
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR11_1st
Beta-prop_LRRK2
TP_0598_N
YNCE
PROPPIN
Beta-prop_ELP1_1st
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
142088705
NCBI-ProteinID:
XP_075020419
LinkDB
All DBs
Position
15:complement(14426234..14430001)
Genome browser
AA seq
323 aa
AA seq
DB search
MALSPYVQAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFLLEKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcgccctacgtgcaggccatgcaggagctgttccgcgccaacacgcggagc
cgcgagttcccggcgcacggcgccaaggtgcactcggtggcctggagctgctgcggccgc
cgcctcgcctccggctccttcgacaagaccgccagtgtcttcctgctcgagaaggaccgg
ctggtgaaggagaacaactaccggggccatggggacagtgtggatcagctctgctggcac
cccagcaaccctgacctcttcgtcacggcgtcgggggacaaaaccatccgcatctgggac
gtccgcaccaccaagtgcatcgccactgtcaataccaaaggggagaacatcaacatttgt
tggagccctgatggacagaccattgcagtggggaacaaggatgatgtggtcactttcatt
gatgccaagacgcatcgctccaaagctgaggagcagttcaagtttgaggtgaatgagatc
tcctggaataacgataacaacatgttcttcctcactaacgggaatggctgcatcaacatc
ctcagctacccggagctgaagcccattcagtccatcaacgctcatccttcaaactgcatc
tgcatcaagtttgatcccatggggaagtactttgccacgggcagtgctgacgcgttagtc
agcctctgggatgtggatgaattggtgtgtgtgaggtgcttctcaaggcttgactggcct
gtgcgaacgctgagctttagccatgatgggaagatgctggcatcagcatcagaagatcac
ttcattgacattgcagaggtggagacaggagagaaactctgggaggtgcagtgcgagtcc
cccaccttcacagtggcctggcacccgaagaggccgctgctggccttcgcctgtgacgac
aaagatggcaaatacgacagcagccgggaggcaggcaccgtcaagctctttgggcttccc
aatgactcctaa
DBGET
integrated database retrieval system
