Calonectris borealis (Cory's shearwater): 142088807
Help
Entry
142088807 CDS
T11211
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
142088807 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142088807 (IRF1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
142088807 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
142088807
NCBI-ProteinID:
XP_075020631
LinkDB
All DBs
Position
15:18674941..18682118
Genome browser
AA seq
318 aa
AA seq
DB search
MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKEGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSVNKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARNRSKRKSYEDMRTEESAERLTNTPLPDDHSSYTAHNYTGQEAEVESTS
ITLDLSPCEVSGSLIDWRPSMEITMADSTNDLYQLQVSPLASSSEVTDEDEEEMNVDIFK
LLEPVQDWHATSVGGKGFLTNEPGMQTMCSTYSYKEQDGEIDTTSGEPEFRLLDQKSSLD
LSWLETVRPTMHVIPCGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcaagaatgcgcatgaggccctggttggaaatgcagattaattccaatcaa
ataccaggactgatatggattaacaaggataagatgatttttcaaatcccgtggaaacat
gcagctaagcatggctgggacatggagaaagacgcctgccttttccggagctgggccatt
catacaggaagatataaagaaggtgagaaagaccctgacccgaaaacctggaaggcgaac
ttccgctgtgctatgaattcactgcctgacatcgaagaagtgaaggataaaagcgtcaac
aaaggctccagtgctgtcagggtttacaggatgctgccgcccttgaccaaggatcagaag
aaagaaaggaagtcaaagtcttcaagagaagcaagaaacaggagcaagagaaagtcgtat
gaagacatgaggacagaggagtcagcagaaagactaaccaacactcctctgccagatgac
cacagtagctacactgctcacaactacacggggcaggaagcggaggttgagagcacgtcc
atcaccttagacctctccccgtgcgaggtgagcggctccctgattgactggaggccgtcg
atggaaatcaccatggctgacagcaccaacgacctctaccagctccaggtgtctcccctg
gcttcgtcctcggaagtcacagacgaagatgaagaggaaatgaatgtggacatttttaag
ctgcttgaaccagtccaagactggcatgccaccagcgttggggggaaaggctttctcacc
aacgagccgggcatgcagaccatgtgcagcacttacagctacaaggagcaggatggggag
atcgacacgacttcaggagagccggagttcaggttattggaccagaaaagcagcctagac
ttgtcctggctggagacagtgagacctaccatgcacgtcattccctgtggcttgtaa
DBGET
integrated database retrieval system
