Calonectris borealis (Cory's shearwater): 142089042
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Entry
142089042 CDS
T11211
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04020
Calcium signaling pathway
cbor04080
Neuroactive ligand-receptor interaction
cbor04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
142089042 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
142089042 (GRIN2A)
04082 Neuroactive ligand signaling
142089042 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142089042 (GRIN2A)
Ion channels [BR:
cbor04040
]
Ligand-gated channels
Glutamate (ionotropic)
142089042 (GRIN2A)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
142089042
NCBI-ProteinID:
XP_075021048
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Position
16:complement(5198594..5376702)
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AA seq
1458 aa
AA seq
DB search
MRKIGCALLVLQALLAPLDLVRGAEKSYPILNIAVILGRTKYITERDIRSLWTREMSADL
TVDVNVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIVMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNVIVLDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISASYDEWDYSLEARVRDGLGIIATAA
SAMLEKYSFIPEAKTSCYGQLEKNDRPSHTLHKFMMNVTWEGKDLSFTADGYQAHPRLVV
IVLNNNREWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLSIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVKINNSTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPYDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKYNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFTLTNSQTNMLKLLRTAKN
MTNINPSRINSPKRTADFIQRGSLIMDMVMDKGNLIFSDNRSFQTKENFFGDNMSELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTAEAKVNSRPRQLWRKSVESLRQESV
RQSQGSQRENGSDENRQLSVKSQRYLPEEIVHSDVSETSSRATCHMEPENNNKHHKTKDN
FKKRTVVSKYPKDCSEVELTYLKTKQSSPRDKIYTIDADKEPGFRLDTPQYIENIVLPET
IEFPDVYEDHNDNYRKAEHANRTPLHNEDSLPDNDQYKLYAKHYTLKDKNASLVDMNDRY
RQNSTHCRSCLSNLPTYTGHYSSRSPYKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
EHSWSQNNALQYHKKNKLRISRQHSFDNITDKSREIDIGRPSRSISLKEREKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYPVHPDDNPFLHSYRDDQHLSLRRSPADL
YKHSLPTRGRNDNYLRSSIKSTASYSSRDGRIHNDMYISEHVLPYVANRNSLYSTPRVLN
SCSNRRACKKMPSIESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggttgtgctctcctcgtactccaagctcttctggcgcctttggatctt
gttcgtggagcggagaaaagttatcccatcctgaacattgcagtgattctgggaaggacc
aagtatatcacagagagagatatcagatctctctggaccagggaaatgtcagcagacctg
actgttgatgtcaatgtagtgacccttctggtgaaccagactgaccctaagagcatcata
acacatgtttgcgacttgatgtcaggcaccaagatccatggagtggtttttggagatgac
actgatcaggaggcagtagctcagattttggattttatttcatctcagacttctattcca
attcttggaattcatggcggggcctccatgataatggcagataaggatgtgatgtccaca
ttcttccagtttggggcttccattcagcaagaagccattgtcatgctgaagatcatgcag
gattatgactggcatgtgttctctctggtgaccaccaccttccctggatatcgagacttc
atcaatgtcattaagaccacagtggaaaatagttttgtgggctgggacatgcagaacgtc
atcgtactcgataccgcctttggagatgccaagacccaaattcagctgaagaaaatccat
tcatccgtcatcctactgtattgttccaaggatgaagctgtctacatactggatgaggct
cgttccctgggccttactggctatgatttcttttggatagttcccagcttggttagtggt
aacacagaaatcactcccaaggagtttccttcaggactcatttcagcatcttatgatgaa
tgggactacagtttagaagctcgggtacgggatggccttgggattattgccactgctgca
tcagccatgctggaaaaatactccttcattcctgaagcaaaaactagctgctatggacag
ctggagaaaaatgaccggccatctcacacgttgcacaagtttatgatgaatgtgacttgg
gaaggtaaagatttgtccttcacagcagatggttatcaggcacatcccaggctggtggtg
atagtactgaacaacaatcgcgaatgggaaaaggtggggaaatgggagaacaactcactg
agcctgaagtactctgtctggccgaggtacagctctttcgcagacagcgacccagacgat
aaccatttgagtattgtcaccctggaggaggctccctttgtcattgttgaggatgtggat
cctttgatggaaagttgccaaaaaaacactgtgccatgtcgtaaatttgtcaaaattaac
aactcaactaatgagggaaccaacgtaaagaagtgctgcaaaggattctgcattgatatc
ttgaagaagttgtctaaaactgtcaagttcacatatgacctgtatttggtgactaatggg
aaacatggcaaaaaagtcaataatgtgtggaatggaatgattggtgaagtggtatatcat
cgtgcagttatggctgtggggtctctcactattaatgaagagcgctctgaagtggttgac
ttttcagtgccatttgttgagactgggattagtgtcatggtgtcacggagcaatggcaca
gtttcaccatctgcttttctagagccttttagtgcttctgtctgggtgatgatgtttgtg
atgcttctcattgtgtccgccatggctgtctttatatttgagtactttagtcctgtagga
tataacaggaacttagcacaagggagagatccccatggaccatcctttaccattggaaag
gcagtgtggttactctggggcttggtattcaacaactctgtgcctgtgcaaaaccccaaa
gggacaacaagtaaaatcatggtgtcggtttgggctttctttgctgtcattttcctggct
agttatactgccaacttagctgcatttatgattcaagaggaatttgttgaccaagtgact
ggactgagtgataaaaagtttcaaaggccgtatgattattcacctccttttcgatttgga
acagtcccaaatggaagcacagagaggaatatcagaaataactaccctgatatgcacctt
tacatgacgaagtataatcagaaaggagttgaagatgccttggttagcttgaaaactggg
aagttggatgctttcatctatgatgcagcggtgctgaattacaaggctggaagagatgaa
ggctgcaaacttgtcacaatagggagtggatacatctttgccactacgggctatggaata
gcacttcagaaaggatcaccttggaaaagacaaattgatctagccctccttcagtttgtt
ggagatggggaaatggaagagttagaaaccctgtggctgactggtatttgccacaacgag
aagaatgaagtcatgagcagccagctggacattgacaacatggcaggagtgttttacatg
cttgcagcagccatggcactcagtttaataacctttgtctgggagcacttattttactgg
aaacttagattctgcttcactggagtctgctcagatagaccaggattgttgttctcaatc
agcaggggtatttacagctgcattcatggagtacacattgaagaaaaaaagaagtctcct
gactttactttgaccaattcccaaaccaacatgttaaaactactgcgaacagcgaaaaat
atgaccaatatcaatccttcaagaattaactcccccaaaagaacagctgattttattcag
aggggttccttgattatggacatggtcatggataagggaaacttgatattttctgataac
agatcctttcagacaaaagagaacttttttggtgacaacatgagtgaactgcagacactt
cctggcaatcgacacaaggacaatcttaacaactatgttttccaaggtcagcatcctctc
acactgaatgagtccaatccaaatacagtagaggttgcagtaacagcagaagcaaaagtg
aactccagacccaggcaactttggaggaaatctgttgaatctttacgtcaagaatctgta
cgtcagagccaaggttcccagagagaaaacgggtcagatgaaaacaggcagctttcagtg
aaaagccaaagataccttcctgaagagattgtccattcagatgtatcagagacatcaagc
cgagctacttgccatatggaacctgaaaacaacaacaagcaccacaaaaccaaggacaat
tttaaaaaaaggacagtagtatcaaaatacccaaaagactgtagtgaagtggaactgaca
tatctgaaaaccaaacagagctctccacgggataaaatctacacaattgatgctgacaag
gagccaggattccgcttggacacacctcagtacatcgaaaacattgtccttccggaaact
atagagtttcctgatgtttatgaagatcacaatgacaactataggaaagcagaacatgct
aacaggactcccttgcataatgaagacagtcttccagataatgaccagtataaactttat
gcaaagcactacactttaaaagacaaaaatgcttccctagttgacatgaatgatagatac
agacagaattccacgcactgcaggagctgtctttccaatttgcccacttacacgggacac
tattcaagcagatctccctataaatgtgatgcatgcttgcggatggggaacctctatgat
attgaagaagatcagatgctgcaggatacaacgaacttatcacttcctgaagaaatatat
gagcatagttggtcacaaaataatgctctgcaatatcataaaaaaaataagttgagaatt
agcaggcaacattcttttgataatatcactgataaatccagggaaattgatattggaaga
ccttctcgtagtataagcttgaaagaaagagagaaatttctacaaagtagtccatatgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaggcctcacttttaactcac
gctctagaggacagtaagcggagcaagtccctgtatcctgttcacccagatgataatccc
ttcctgcactcgtatcgtgatgaccagcacttatctcttaggcgaagtccagctgatctt
tataaacattcattaccaacaagaggaagaaatgataattatttaaggtcatccataaag
tctacagcatcatactcttccagggatggtcggatccataatgacatgtacatttcagag
catgttttgccttacgttgcaaataggaatagcttgtactcaactccaagggttttaaat
tcctgtagcaatagacgtgcgtgtaagaaaatgcctagcattgaatcagatgtttaa
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