Calonectris borealis (Cory's shearwater): 142089073
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Entry
142089073 CDS
T11211
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142089073 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142089073 (GSPT1)
03012 Translation factors [BR:
cbor03012
]
142089073 (GSPT1)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
142089073 (GSPT1)
Translation factors [BR:
cbor03012
]
Eukaryotic type
Release factors
142089073 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
142089073
NCBI-ProteinID:
XP_075021156
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All DBs
Position
16:7193902..7220943
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AA seq
622 aa
AA seq
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MEANGSGSGSSSDSAPDCWDQADIEPGSGAGPGSAPPAAEAEAQQELLGAAFSRQLNVNA
KPFVPNVHAAEFVPSFLRGGPAPGLPPPSPPPGLPPPPPHGAPVETSPEEQTASCEGSNA
AVNMEISESVVENGETEMSPEESWDHKEETSEAELGGGPAGDAGPSEESAQEMMEEEEEI
PKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKN
RETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQAD
LAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEEC
KEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRS
VDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVA
PGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIH
TCIEEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRF
TLRDEGKTIAIGKVLKLVPEKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcagcggcagcgggagcagcagcgactcggctcccgactgctgggat
caggcagacatcgagccgggcagcggcgctggcccggggtccgccccgccggccgcggag
gccgaggcccagcaggagctgctcggggcggccttcagtcggcagctgaacgtcaacgcc
aagcccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgagggggggg
ccggcgcccggcctgccgccaccctcgcccccgcccggcctgccgccgccgccgccccac
ggtgcacctgtagagacttctccagaggagcagacagcctcttgtgaaggttcaaatgct
gctgttaacatggaaatttcagaatctgttgtggaaaatggagagacagaaatgtccccg
gaagagtcatgggaccacaaagaagaaacaagtgaagcagagctaggaggtggtcccgca
ggggatgcagggccttctgaagaaagcgctcaggaaatgatggaagaggaggaggaaata
ccaaaaccgaaatctgttgtagcaccaccaggtgctcctaaaaaagagcacgtaaatgta
gtattcattgggcacgtagatgctggcaagtcaactattggaggacaaataatgtatttg
acaggaatggttgacaaaagaacacttgaaaaatacgaaagagaagctaaagaaaaaaac
agagaaacatggtacctttcatgggccttagacacaaaccaagaagaacgagacaaaggt
aaaacagtagaagtgggtcgtgcctattttgaaactgagaagaaacacttcactattcta
gatgctcctggacataagagctttgttccaaatatgattggtggagcttctcaagctgat
cttgctgtgctggttatttccgcaagaaaaggagagtttgaaactggatttgagaaaggt
ggacaaacaagagaacatgccatgttagcaaaaacagcaggtgtaaaacatttaatagtt
cttattaataaaatggatgatccaactgtaaactggagtaatgaaagatatgaggaatgt
aaagagaaactggtgccatttttgaagaaagttggcttcaatcccaaaaaggatattcat
ttcatgccctgctcaggactgactggagcaaaccttaaagaacagtcagaattctgtcct
tggtatattggattaccgtttattccatacctggataatttgccaaacttcaaccgttca
gttgatggaccgatcaggctgccaattgtggataaatataaggatatgggcactgtggtc
cttgggaagctggagtcgggctctatttgtaaaggacaacagcttgtgatgatgccaaac
aagcacaatgtggaagttcttggaatcctttctgatgatgtagaaactgattcagtagcc
ccaggtgaaaatctaaagatcagactgaagggaattgaagaggaagagatccttccagga
tttattctctgtgatcccaacaacctgtgtcactctggacgcacgtttgatgcccagata
gtgataattgagcacaaatccattatctgcccaggttataatgctgtgctgcacattcac
acctgtattgaagaagttgagataacagccttaatctgcttggtagacaaaaaaacagga
gaaaaaagtaagacacggccccgttttgtgaaacaagatcaagtatgcattgcccgttta
aggacagcaggaactatctgccttgagacattcaaagatttccctcagatgggtcgcttt
accttaagagatgagggtaagaccattgcaattggaaaagttctgaaactggttccagag
aaggactaa
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