Calonectris borealis (Cory's shearwater): 142089084
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Entry
142089084 CDS
T11211
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cbor00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cbor01100
Metabolic pathways
Module
cbor_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
142089084 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
142089084 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cbor01003
]
142089084 (XYLT1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
142089084 (XYLT1)
Glycosyltransferases [BR:
cbor01003
]
O-Glycan biosynthesis
Glycosaminoglycan
142089084 (XYLT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Seadorna_VP2
Motif
Other DBs
NCBI-GeneID:
142089084
NCBI-ProteinID:
XP_075021196
LinkDB
All DBs
Position
16:8004048..8203096
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AA seq
922 aa
AA seq
DB search
MVAAPCARRLARRSRSALVAALTVLLLQTLLVWNFTSLDAGEEQRGGAAGREKRDHGGDQ
RAHPQRRGPAAPHGKAMIEPPSPYTSLETQDGYFSHRPKEKMRTDSNNENSVPKDFENID
NSNFAPRTQRQKHQSELVKKTLSKQKEHLRKKLEEEKMKENLLLGKNSNEVVQFSNHPRK
NSSSSNSNDLKEIHRSPRQHHFKKSGNSSPELRYDQPPKCEVTGKEAISAMSRSKSKQCR
QEIAEVYCQHKQGKLMPEKVTRFCTLEGKANNNVQWDEDSVEYMPANPVRIAFVLVVHGR
ASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQFANQYPNVRVTSWRMATIWGGASL
LSTYLQTMRDLMEMNDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNAR
FIRKQGLDRLFLECDTHMWRLGDRRIPEGIAVDGGSDWFLLNRKFVEYVTFSNDDLVTKM
KRFYSYTLLPAESFFHTVLENSPYCDSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPN
DFKPADFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPSGTPGLRSYWENVYDE
PDGVHTLSDVALTMYHAFSRLGLRRAETSFHAAGDNSCRYYPMGHPVSVHLYFLADRFQG
FLIRHHATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEIGTEWDAKERLFRNFG
GLLGPTDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILIESSAEFTHYKPPLNLPLR
PGVWTIKILHHWVQVAETKFLVSPLTFSNRQPIKQEEAMKYHSGPPKNAYMEQSFQGLNP
VLNIPISAARVDQAKRNAGLVGTRLEAWVDSLVSSVWSAVDICSTGPTACPVMQGCAQTA
WSSLSPDPKSELGPVKPDGRLR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgctccgtgcgcccggcggctggcgcggcgctcccgctcggcgctggtggcg
gcgctcaccgtgctgctcctgcagaccctcctcgtctggaatttcacctccctcgacgcc
ggcgaggagcagcgcggcggcgccgccggccgcgagaagcgagaccacggcggagaccag
cgggcgcacccgcagcgccgcggacccgccgccccgcacggcaaggcgatgattgaacct
cctagtccctacaccagcttggagactcaggatggctatttttcccaccgaccgaaagag
aaaatgcgaacagacagcaataatgaaaattcagtccccaaggactttgaaaatattgat
aacagtaactttgctcccaggactcagaggcaaaaacaccagtctgagctggtgaaaaaa
acccttagcaagcaaaaggagcacttgagaaagaaactggaagaggagaagatgaaggag
aacttgctgctggggaagaactccaatgaggtggtgcaattcagtaatcaccccagaaaa
aacagcagcagcagcaacagcaacgatttgaaggagattcacagatctcccagacagcat
cattttaaaaaaagtggaaacagctcccctgaactgagatacgaccaaccaccaaagtgt
gaggtaacaggcaaagaggcaatctcagccatgtcccggtctaaatctaagcagtgtcgg
caggagatcgcagaggtgtattgtcagcacaagcaaggaaagctgatgccggagaaggtg
acgcgtttctgtacgctggagggaaaagccaacaacaatgtacagtgggatgaggactcc
gtagaatacatgccagccaacccagtcaggatcgcatttgtcttggttgttcatggcaga
gcttctcggcagctccaacgcatgtttaaggctatttaccataaagaccatttttattac
attcatgttgacaagcggtccaattacttgcaccggcaagtcctccagttcgccaaccag
tatccaaatgtcagagtcacttcttggagaatggcaaccatctggggaggagcaagtctt
ctgtccacctacctgcagaccatgagggacttaatggagatgaatgactggccatgggat
ttcttcattaacctcagtgctgctgactacccaatcaggacaaatgaccagctagtagca
ttcctgtccagataccgtgatatgaacttcttgaaatcacacgggagagacaacgcaaga
tttatcagaaaacaaggactggatcggcttttcctggaatgtgatacccacatgtggcgc
ctgggggaccggaggatcccagaaggaattgcagtcgatggagggtcagactggtttctc
ctgaacaggaagtttgtggagtatgtcactttttctaatgatgatctggtaacaaagatg
aagaggttttactcttacacgttgcttcctgctgagtccttctttcacactgttctggaa
aatagcccatactgtgactccatggtggacaacaacttgcgcatcacgaactggaaccgt
aaactcggttgcaagtgtcagtacaagcacattgttgactggtgtggctgttcgcctaat
gacttcaaaccagcagacttccaccgattccagcagactgccaggccaactttctttgcc
cgcaaatttgaagctgtagtgaatcaagagataattggccagttggactactacttgtac
ggcaactacccgtctggcacacccggcctccggtcatactgggagaacgtgtatgatgag
cctgacggcgtgcacaccctcagcgatgtcgccctcaccatgtaccatgcgttctcccgc
ttgggcctgcgcagagccgagacttcgttccatgctgctggagacaacagctgccgatac
taccccatgggccatccagtttccgtccacctttacttccttgctgaccgtttccaaggc
ttcctaatcagacaccacgccaccaatctggccgtcagtaaactagaaactttggaaacg
tgggtgatgccaaagaaagtctttaagatcgcaagtccaccaagcgattttggaaggtta
cagttctcagagattggcaccgaatgggacgccaaggaaaggcttttccggaattttgga
ggactccttgggccgacagatgagccagttggcatgcagaaatggggaaaaggccccaac
gtcactgttactgtcatttgggtggatcctgttaatgtaattgcagcaacgtacgatatt
cttattgaatccagtgccgaatttactcactacaaaccacctttgaatttgcctctgcga
cccggtgtctggacgataaaaattctgcaccactgggtacaggtagctgaaaccaaattc
cttgttagtcctctcaccttctctaatcggcagcctatcaaacaagaggaagccatgaag
tatcacagtgggcctccaaagaacgcgtacatggagcagagcttccagggcttgaatccc
gtcctgaatatccccatcagtgctgcccgcgtggaccaggccaagaggaacgcagggctc
gtgggcacccggctggaagcctgggtggactctctggtcagcagcgtctggtcagccgtg
gacatctgcagcaccggccccactgcctgcccggtcatgcagggctgcgctcagacagcc
tggagctccttgagcccggaccccaaatctgagctgggccccgtcaaacccgatggtcgc
ttgaggtag
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