Calonectris borealis (Cory's shearwater): 142089092
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Entry
142089092 CDS
T11211
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
142089092 (TMC5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142089092 (TMC5)
03037 Cilium and associated proteins [BR:
cbor03037
]
142089092 (TMC5)
Transporters [BR:
cbor02000
]
Other transporters
Pores ion channels [TC:
1
]
142089092 (TMC5)
Cilium and associated proteins [BR:
cbor03037
]
Other cilia and associated proteins
Stereociliary proteins
142089092 (TMC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
142089092
NCBI-ProteinID:
XP_075021212
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All DBs
Position
16:8642927..8669603
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AA seq
885 aa
AA seq
DB search
MSYHYNEAFENPDYHFSETLEIDRRRNSQKNLFSHQSPYDSSLHGSYGEHSRREQNYPLA
SMRHSSEYSESLPRVNVLSRSPYGSSMDNLSFEPEPELAYSPPSTFHLLDRPYTHRISNV
SEDSFIRRRNRRSPDEIFMTSSSLFETDPVCKEGRSLDKWFVGSLASMSTSERIKAIQKM
PETMSKKREIRNKVLKEITKKSRHRSTQLSCCTQCLQGTVVSFRRFGNSLSECFHLLQLW
HKTLKIIGAEFGTSVLSYFIFLKWLLTFNIFSFLINFSFITIPQFVAAEPNNLSFTGLEL
LTGTGYFQQTVLYYGFYTNATISKIENGPSYNMQLAYIFTVGIYFVICFLILLFSMAKSF
CRNFINPQTYSGNASKLLCTWDFNINNEKAVKLKQKNLSTQIKEDLTEVNREVLNLSVTE
RVVRIVIHLVSWVAALGTAVAACAGVYFLSINNLKLFMKGHKNDLESQAAMLVLPIVTSL
LNAFIPFFYSWLGHLERFRTPGHQIYVTIIRNIILKISIVGILCYYWLNIVAASESQCWE
TLVGQDIYRLVLVDFIFCLLGSFFGEFLQRIIRTTVCVSLGLPEFDIGRNLLDLIYAQTL
TWIGILFSPLLPGIQMVSFSIVFYVKKVSLMMNCQPPRKVWRTAQMTTSFMFLLFFPSFL
GVLSVIGVTVWRLKPSKECGPFRGLSSMYAAVSEWIKILENYTASKWVVWIYHNLITNEL
FFFILSVLVLIFTYFYWQIIEGRKTMTKLLHKQIINEGKDKMFLLEKLRALQRAKQNPSA
PRGQGQQRNSSSYHPSRQPALQVPGYPGKAFDRNQNASHNEYPYSAGILRGTAFPLDSET
CQPSSRPGMSEAVALALRAREAAQWEDEDDDADFRPRAGRINNEC
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattacaatgaagcctttgaaaatccagactaccacttctcagagacactg
gaaattgatagaaggcggaattctcaaaagaatttgttctctcaccaaagcccttatgat
tcttcactccatggttcctacggagaacacagcagaagagaacagaattaccctctggcc
tccatgagacacagctctgaatacagtgaaagtttaccaagagttaatgtcctaagcaga
agtccatatggaagttccatggataatctttcctttgagcctgagccagaactggcatac
agcccaccttctaccttccatctactggatcgcccctatacccacagaatttccaatgta
tcggaagatagctttattcggagacgcaacagaagatcacctgatgagatcttcatgact
tcttccagcctgtttgaaacagatccagtgtgcaaagaaggtaggagtttagataagtgg
ttcgttggaagtcttgcaagtatgtctaccagtgaaaggattaaagcaatccagaagatg
ccagagaccatgagtaaaaagagagagatcaggaataaagttcttaaagaaataacaaaa
aaatcaaggcaccgcagtactcaactttcctgctgtacacagtgtctgcagggaacagta
gtgtcatttcggcgatttggaaatagcttgtcagaatgttttcacctactgcagttatgg
cacaagactctgaagatcattggtgccgagtttggaacaagtgttctttcttattttatt
ttcttgaagtggctgctaactttcaacatattctcattcctcataaacttcagtttcatc
acaatccctcagtttgttgcagcagaaccaaataacctttcattcacgggtctggagctg
ctcactggaactggttattttcaacaaacagtactctactatggcttttacaccaatgct
acaatcagtaaaatagagaatggtccgtcttacaacatgcagctggcttatattttcacc
gttggaatatattttgtcatctgttttcttatcttgttgttcagcatggcaaaatccttc
tgcaggaacttcattaaccctcagacatactcgggaaatgctagcaaacttctctgcacg
tgggacttcaatataaataatgaaaaagccgtgaagctgaaacaaaagaatctcagcaca
caaataaaggaagacctcactgaagtaaacagagaagttctaaatctttctgtaacagag
agagttgttcgtattgttattcatcttgtttcttgggttgctgccctgggaacagcagta
gctgcttgtgctggtgtttacttcctctccattaataacctaaagctgtttatgaaaggg
cataaaaatgacctggagagccaagctgccatgttggtgctacctattgtcacatctctc
ctcaatgcattcatcccattcttctactcgtggcttgggcacctggagagatttcggact
cctggacaccagatatatgtcaccattataagaaatatcatcctgaagatatcaattgtt
ggaatactgtgctactactggcttaacattgtggctgcatcagagtcgcagtgctgggaa
actctggttggccaagatatctatcgtcttgttctagttgacttcatattttgtttgctt
ggctctttcttcggagagtttttacaaagaattattagaactacagtctgtgtgagcctg
gggctgccagaatttgatatcggaagaaatcttttagacttgatttatgcacagactttg
acgtggatcggtatcctcttctcacctctgctgcctggtatccagatggtatcattttct
atagtattttatgtgaaaaaggtcagtctgatgatgaattgccaaccccctcgcaaagtc
tggagaactgctcaaatgacaacatccttcatgttcctgctgtttttcccttccttcctt
ggagtcctgtctgtcattggagttacagtctggaggttaaaaccttcaaaagaatgtggt
cctttcagaggtttgtcttctatgtatgctgcagtctctgagtggataaaaatactggaa
aattacactgcctcaaaatgggtagtgtggatctaccataacttaattacaaatgaactt
ttcttcttcatcctctctgttcttgtcctaatttttacttatttttactggcaaataata
gaaggaagaaagaccatgaccaaactcttacataagcaaattattaatgaaggaaaagat
aaaatgtttttacttgaaaaactacgggcactgcaaagggcaaaacaaaacccatctgca
ccaagaggacaaggccagcagagaaactcttcttcataccacccgtccaggcaacctgcc
ctgcaagtgccaggctacccaggaaaggcatttgacagaaatcaaaatgcatcccacaat
gagtatccctattctgctggcatcttgagggggactgccttcccactagattcggagaca
tgccagcccagcagcaggccaggcatgtctgaggcagtggcgctcgctctgcgtgcgagg
gaagcagctcagtgggaagacgaagatgatgacgcagattttcgaccacgagcaggcaga
atcaataatgaatgttga
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