Calonectris borealis (Cory's shearwater): 142089127
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Entry
142089127 CDS
T11211
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbor01002
]
142089127 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142089127 (USP42)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142089127 (USP42)
Peptidases and inhibitors [BR:
cbor01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
142089127 (USP42)
Ubiquitin system [BR:
cbor04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142089127 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
142089127
NCBI-ProteinID:
XP_075021295
LinkDB
All DBs
Position
16:complement(9727114..9746681)
Genome browser
AA seq
1393 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVDKGPGGAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVDLSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAGFMGPRLPPHMIKNSSRLNGNGPLKEDPNTVGVTLKRPSS
APPTACVQNWAITRPSITDPSKNQKITISIHNKLPARQTVSQPDCLSSAAEDEDLSKPVP
SSTITNSSAAESTSNASTVSVATNVSKQEIPDEIFVEPAVNGNPKLSSDNTVPYGAESSG
KSEESKGLFKRNCNIISSNGILIGKVVRTLQNSHSSCQNAEEERSQHELPKNDSLNGAIS
LDNESKENGLKLDDSTCQVQPVKPSEIFFSKTNGLLETMPIALSPVPQEIILESLTYSQL
NSLSEEISVPGPQKSSENDALMETVVMEALFAYEESRKVPSNFSCDVENLFTQSDSDTIS
TKEEVAESIITKADNAHPNINGQHKVRKKSLDTEDEFLGQCESEDSRDKDKPRRSKEPEL
ISKENPLYIKGSPESEEKLGQTSSIKSDIECSSKKLASLDITDKFQDTKDISNNYVEVPP
VNDSSITKLDKVLESQFSRENEGLSNKKCEEDKHRKKYKKKIYDSKKTDKEHYRKKRENS
DTEEREKEKQTRSKPDDYSHKRRCSRSVETNKQNRHKQEYCNESKYRSSHNERNSPNNGK
SSGKYSRYRSRSRERIEQDRNRYYHSKGERTWSRERYYQDEPRRWEKCRYYNDYYSCHGT
RDGRERKSSHCDKDFDKSSQAYNNRSHKDYHCKSRWPHNTLSREEDVHHFSSHRATLHHC
SVPQQQSEKYSRERHALPPVSAHSNFEESSRENEKEKLRNGKRKYTHAEGSGSEIEKKCR
KIGDQRMKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKRKKKKKKKKHIRKL
KGFLEYLDPRFQKKTREKKEESCPPGGYLCEQYRNQGSKQPYKEGKPSGAGESKKYSSIT
SNEYVKDVDLPSPKHTEFTVVNPPEDASQFNTWRMRSLLMEAFNTQTKPTIKTNNFLPSK
PTTFSHQTRHYQY
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatctaaaaaatcgtcatcaaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacgtcacgcaccgcaaatctgggccgg
gtaccacctgcagaagatccaaacaaagtctctgtggacaaaggacctggaggtgctatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgac
ggaattgccccgccacaaaggattctttttccacctgagaaaatttgtatggattggcaa
caaacgcaaagtgttggagttggactgcagaatcttggcaacacgtgtttccttaattct
actctgcaatgtttgacctacacgcctcctctcgccaattacatgctgtctcttgaacac
acccagtcatgtcatgaagaaggcttctgtatgatgtgcacgatggaaactcacattaat
caggttctgtgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttaaatggaagcaccaaattggacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtttcggatacatatgagccattccttgatattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacaactggac
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttcctgcgtcaaagaggtat
acgatacatcgttcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcatatatg
tcccaatcaattggagaaccactcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggccggtaatggactttggtat
cgaatgaatgatgcctcagtagacctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctatgatttgacactcggagaacgtgctttttactta
ccagcaccgtcttatccccgttcattccttggtcagcggggggctaatagtaagcaggct
ggatttatgggaccacgacttcctcctcatatgattaagaattcaagtcgtttaaatgga
aatggacccctgaaagaggatccaaataccgttggtgtcaccctaaaaaggccatcttca
gctccaccaacagcttgtgttcagaactgggcaattaccaggccttcgattactgatcca
tcaaaaaaccagaagatcactatcagtattcataacaaattgcctgcacgtcagactgtg
tcgcaacctgactgtcttagcagtgctgcggaggacgaggatctaagcaagcctgttcct
tcatccacaattacaaattcttctgcagcagagtctacctcaaatgcatctacagtgtca
gttgctactaacgtttccaaacaggaaattcctgatgaaatttttgttgagccagcagtg
aatggaaatcctaaactcagctctgataacacagtcccttacggtgcagaatcttcaggg
aaatctgaggaatcgaagggcttgtttaaaaggaattgcaacataatatcttctaacgga
attttgattggaaaggtggtccgtacattgcagaattcccattcttcctgtcagaatgct
gaagaagaaagatcccagcacgagctgccaaaaaatgattcactaaatggtgctattagt
ttagataacgaatctaaagaaaatggactgaaacttgatgattctacttgccaagtccaa
cctgttaaaccttctgagattttcttttctaaaacaaatggattgcttgaaacaatgcct
atagctttgtcgccggttcctcaagaaataatcttagaatctctcacatacagccagttg
aacagcttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaatgatgct
cttatggaaactgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttcct
tccaactttagctgtgatgttgagaatctttttactcaatcagattctgacaccatttct
accaaagaagaagttgctgaaagtattataacaaaagctgataacgcgcatcccaatatc
aatggtcagcacaaggtcaggaaaaaatccttggacactgaagatgaattccttgggcag
tgtgagtctgaagatagtagagacaaagacaaaccaagaagatcaaaagaacctgaacta
atttcaaaagaaaatcctttgtacatcaaagggtctcctgagagcgaagagaaattgggg
caaacttcctctataaagtctgacattgaatgtagttctaaaaaacttgcatctctagat
attacagataaattccaagatacaaaggacatttctaataactatgtagaggtaccacct
gttaatgactcttctattacaaagctggataaagttttggagagtcaattttctagagaa
aacgagggattgagtaataaaaaatgtgaagaagataaacataggaaaaaatataagaaa
aaaatatatgactctaaaaaaactgacaaagagcactaccgaaagaagagagaaaactca
gacactgaagagagggagaaggagaagcaaaccagaagcaaaccagatgattattcccac
aagaggaggtgctctcgcagtgtggaaacaaataagcaaaatcgtcataagcaggaatat
tgcaatgaaagcaagtacagatcttcccataatgaaagaaacagtccaaataatggcaaa
agctcaggaaaatattctcgttatagatcccgaagcagagaaagaatagaacaagacagg
aacaggtattatcattccaaaggagagagaacttggagcagagaaagatactatcaagat
gaaccacggagatgggaaaaatgcagatactacaatgattattattcctgtcatggaaca
agagatggtagagagagaaagtcctctcattgtgataaagactttgacaaatcgagtcag
gcttacaacaacaggtcacacaaggattatcattgcaaaagcagatggcctcacaacaca
ctctctagagaggaagatgtacatcacttcagcagccacagagcaaccttacatcattgt
tcagtacctcagcagcaatctgaaaaatattctcgtgaaaggcatgcacttccacctgtg
tcagctcattcaaattttgaggagtcttcccgggaaaatgaaaaagaaaaactaagaaat
ggcaaaagaaaatacacccacgcagaaggaagcggaagcgaaatagaaaagaaatgccga
aagataggtgaccaaagaatgaaaaaatataagaaggtcaagaagaaaaagaagtccaaa
gataaacatcgagagaaggattacaaactttatgatttggatttctctgtgctccgcttt
gacaatgacaatcgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactg
aaaggcttcttggaatatttagatcctcgtttccagaagaaaacacgggagaagaaggaa
gaatcctgtcctccaggcggctatttatgtgagcaatacagaaaccagggcagtaaacaa
ccctacaaggaagggaagccttctggcgcaggtgaaagcaagaaatacagctccatcaca
tccaatgagtatgttaaagatgtagatctgccttctcctaagcacactgaattcacagtt
gttaaccctccagaggatgcttcgcaatttaacacctggagaatgcggagcttactgatg
gaagccttcaatactcaaactaaacctaccatcaaaaccaacaactttttaccatcaaaa
ccaacgactttttcccatcaaacccgacattaccaatattga
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