Calonectris borealis (Cory's shearwater): 142089226
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Entry
142089226 CDS
T11211
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142089226 (RAI1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
142089226 (RAI1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
142089226
NCBI-ProteinID:
XP_075021525
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All DBs
Position
16:14763320..14805521
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AA seq
1922 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYSG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDSLMKKTAAALAGGRPYHEPAAASLPFRTHFQQQQQQQQQQQPPALPYPKLQRQ
KLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPL
GSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPPQPLQGRH
HAPETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSY
SSTPSPLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDAQSGNCKNL
QKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGIKTPARTPEQLKG
QHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQNRSPA
RVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLS
ALSQEELASEIIVLQDAISEKADKAWANSPMLSKEATKSPFQLENHRPCLDSMVKGAWPS
QGDSSTLTEPLKLDKASGASAGKDFGEEVYEGPQVEFAATETKDALKDAASLAFNSKPSI
PAATSSAGAAGYSCYSNTTANSVGSENAMEHFEWPEESLGEACLRWKELGSGLQAPDLPK
GLFPSKLVGSCKEKKNACGLDLCDSEQPAKSEPARDFSQQVMEEEEEETLTYDEATKADS
ERWLQDTRHCCSTGDFSEIPIISSPELKESDLEAEEYSSLCELAGSEQKSVTYDASPPKP
PEMPAVLSSSEVPVSAEETVSTVEKESSAPAARLSGQSVILLGPAVGTETKVKSWFKSSL
PHIQPEEETGGGEPSHSEAADAESSPSVMVKQQLGPENALGKTEPVSRGKSLRNKRVHCR
LPEGDGPGSAVPSPFDDLPAAGSVASACLGPNGQAEIPSKNAHSQTPRFPAEGLPARMCT
RSFTALAEPRAPAPLEGLKAPAHQEKLGKKPACGVKQRVAFKARKRSGRPAPKVVQNVGD
AALLVPSLVTAEEAAGPTPPDGDAVEAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADV
RLKNCKAPKKLISNNHLPPAFKLAAPGSPHKEGKVGARMKLPKTGPGVGGKMSERPLHSL
KRKSTFISPIPAKKRNLVLRSNSGGVKEEKPEAPPSLFKKMPVAKKVKAKLPPKSSGEAI
PKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKP
AATAAVATAAPYGTSLSPAGVERERAVKHSGVAPAAGDARLPKPAAAQKAPAMPAAEQLC
RNPNGRAPKGKLGSGKKLSADGCQGEACVPAPGAQPSSAMAAKSLGLLPKKRNRKGKAAA
LGMAKAPLGPAPPPLPRERAAGPGGGEEAPREGKKPKSEEKEAGGGEGPPEGRPTAGPAR
GPKPRANHSNYNGYSKRQRKRLAHGKAKAVPARCKSRGKRRRQAQQAPLLDPAEPEIRLK
YISCKRLRADSRAPPFAPYVRVERRGEFTTACTVVNSPGEEARLQRGPAGPAPRPRAALP
ASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARA
EGPGEDAIPPAAAERVPRGTEGGCGAGGKAARPEGAAEAAKQSALRSSPRGMFRRLQSCY
CCDERTEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGL
QEAVKAAADLKCSSCQQAGATVGCCQKGCPHTYHYACAVDTGCLLTEESFSLKCPKHKRQ
PM
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccgtactcgggc
tacgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcagggcagcag
ctgcaaggcaggccggccttttccaattacgccgtgcaggagaacagcccctacccggcc
cgttattcaggggacgagagcttgcaggcgtggggcggccagccgcaggcgctgcccggc
ggcgtggccaagtatgaggacagcctgatgaagaagacggcggcggcgctggcgggcggg
cggccgtaccacgagccggcggccgcctcgctgcccttccggactcactttcagcagcag
cagcagcagcagcagcagcagcaaccgcccgcgctcccttaccccaagctgcagcggcag
aagctgccaaacgacgtctcctcgcccatgcccttctcgcagagcccccacttcgggcag
cactcacagtccttccccgcctcatccacctactcctcggtgccggggggcagccagccg
gcacactcctacaagagctgcacggcaccctcggggcaaccgccgctggagcggcccctg
ggcagcgccgccagcctggcccccggcccccgcgtgcccaacctgcacggctaccagccc
aaccgcatcggctacgagcagcccccgcagccgccgccgcagcccccgcagccaccgccg
ccgcagcccccgcagccgccgcagcccccgcagccgccgcagcccttgcaggggcggcat
cacgccccggagaccctccactaccaaaacttggctaaataccaacattataaccaaccg
ggccagacctactgccagggcgacgcgccgcccgtccggacgccggagcagtactaccag
accttcagccccagcgccagccactcgccggctcgctccgtcggcaggtccccgtcctac
agctccactccctccccgctgatgcccaacctggagaacttccagtacagccaacagccg
ctgagcgccggcgccttcccagccggcatcgccgaccacagccatttcatgccgctgctg
aatccctctcccaccgacgggacgagccccgacgctcaatccgggaactgcaaaaacttg
cagaaggagaagctgcccgaaaacctgctgtcggacctgagcctgcagagcctgacggcg
ctcacctcccaggtggagaacatctccaacaccgtccagcagctgctgctctccaaagca
gccgtgccccagaaaaagggcatcaagaccccagcaaggacccccgagcagctcaagggg
cagcactgcagccccgagagcagcacctactcggcggagcaggtggggacccccctgtcc
gatccgctcagcaccccccagtccgtccacgccgagacgcaggacgccgactatctcagc
gggtcggaggaccagctggagaggagtttcctgtactgcaaccagaaccgcagccctgcc
cgcgtcaacagcaactccaaggcgaagcccgagtcggtgtccacctgctctgtgacctcc
ccggacgacatgtccaccaaatcagacgactccttccagagcatccacgccagcctgccc
ctggagaccttcaccaagtacgtgaccaacgaacgggactgtccccggctgctcctcagc
gccctgtcccaggaggagctggcttccgagatcatcgtcctgcaggacgccatcagcgag
aaggcggacaaagcctgggccaactcgcccatgctgagcaaggaggccaccaagtccccc
ttccagctggagaaccaccggccctgcctggactccatggtgaagggtgcctggcccagc
cagggcgactccagcacgctcaccgagcccctcaagctggacaaggcttcgggggccagc
gcggggaaggattttggtgaggaggtgtacgaaggtccccaggtggagtttgcggccacc
gagaccaaggacgcgctgaaggacgcggcctcgctggccttcaactccaagcccagcatc
ccggcggcgacgtcaagcgcgggggccgctggctacagctgctactccaacaccaccgcc
aactcggtggggtccgagaacgccatggagcacttcgagtggccggaggagagcctgggc
gaggcgtgcctgcggtggaaggagctgggctcgggcctgcaagcccccgacctccccaag
ggcttgttccccagcaaattggtgggctcctgcaaggagaaaaaaaatgcctgcggcttg
gatctgtgcgacagcgagcagccggccaagagcgagccggcccgggacttcagccagcag
gtgatggaggaggaagaggaggagacgctgacctacgacgaggccacgaaggcagacagc
gagaggtggctgcaggacacgcggcactgctgctcaaccggggacttcagcgagatcccc
atcatctcctcgccggagttgaaggagtcggacctggaggcggaggagtactcctcgctc
tgcgagctggccggctcggagcagaagtcggtgacgtacgacgcctcgccgcccaagccc
ccggagatgcccgccgtgctgtcctccagcgaggtgcccgtgtccgctgaggagaccgtc
agcacggtggagaaggagagctcggctcccgccgcgcgcctctccggccagtccgtcatc
ctgctgggccccgccgtgggcacggagaccaaggtgaagagctggttcaagtcctccctg
ccccacatccagcctgaggaggagaccggcggaggggagccgtcccactcggaggcggct
gatgccgaatcctccccgtcggtcatggtgaagcagcaactcggccctgaaaacgcattg
gggaagacagagcctgtctcgcgtggcaagagcctccgcaacaagagggtccactgccgg
ctgccggagggggacggccccggcagcgccgtgccgagccccttcgatgatctgccggca
gccggcagcgtggccagcgcctgcctcggccccaacggccaggcagaaataccaagcaag
aacgcccacagccaaacaccccggtttccagccgagggtctgccggcgcgcatgtgcacc
cgctccttcaccgccctcgccgagccccgcgccccggccccgctggaggggctgaaggcc
cccgcgcaccaggagaagctggggaagaagcccgcctgcggcgttaagcagcgggtggct
ttcaaagccaggaagcgcagcggccggccggcccccaaggtggtccaaaacgttggcgac
gccgccctcctggtgcccagcttagtgacggcggaggaggcggcagggccaacaccgcca
gatggggacgcggtggaagcaggggagagggaccagcggtcgatgatcctgcgctcccgg
acaaagacgcaagaggttttctacaccaagaggcggcggggcaagcgggcggccgacgtc
cggctgaagaactgcaaggcgcccaagaagctcatttccaacaaccacctcccacctgcc
ttcaagctggcggccccgggcagcccccacaaggaggggaaggtgggcgcccggatgaag
ctgcccaaaacagggccgggcgtggggggcaagatgtctgaacggcccctgcactcgctg
aagaggaagtccaccttcatctcccccatccctgccaagaagaggaacctggtcctgcgg
agcaacagtggcggcgtgaaggaggagaagccagaggccccccccagcctcttcaagaag
atgcctgtggccaagaaggtgaaagccaagctgccccccaagagctccggtgaagccatc
ccaaagccccccctgccgaaggaggcccccgatgtctgcatcaagatcacctcccgggcg
gccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggcctcaag
ctggaggccatcgtccagaagatcacctcgcccaacctgaagaagttcgcctgcaaaccg
gcggccacggcagcggtggccacggcggctccctacggcacctccctgagcccggcgggg
gtggagagggagcgggcggtgaagcacagcggggtggccccggcggcgggcgacgcgcgg
ctgcccaagccggcggcagcgcagaaggcgcccgccatgccagcggcagagcagctctgc
cgaaaccccaacggccgagcaccgaaggggaagctgggcagtgggaagaagctctccgcc
gatggctgccagggcgaggcctgtgtgccagccccgggggcccagcccagctccgccatg
gcagccaagagcctggggcttctgcccaagaagaggaaccgcaagggcaaagcggcggcg
ctgggcatggccaaggcacccctgggccccgcgccgccgccgctgccccgggagcgtgcg
gccggcccgggcggtggggaggaggcaccgcgggagggcaagaaaccaaagagcgaggag
aaggaggcggggggcggcgagggcccccccgagggacgccccactgccgggccggcgcgg
gggccgaagccgcgggccaaccactccaattacaacggctactccaagcggcagcggaag
cgtctggcccacggcaaggccaaggcggtgccggcacggtgcaagagccgcggcaaacgg
cggcggcaggcccagcaggccccactgcttgaccccgccgagcccgagatccggctgaag
tacatctcctgcaagcggctgcgggcggacagccgggccccccccttcgcaccctacgtc
cgcgtggagcggcgcggcgagttcaccaccgcctgcaccgtcgtcaactcgcccggtgag
gaggcccggctgcaacggggaccggccggaccggcaccgcgaccgcgggcagccctgccc
gcctcctccaccatgcacatggggccggtggtgtcgaaggcgctgagcgctgcctgcctg
gtctgctgcctgtgccgcaaccccgccaactacaaggacctgggggacctctgcgggccc
tactaccccgaggactgcctgcccaagaagaagtcgcggctgaaggagaaggcgcgggcg
gaggggccgggcgaggacgccatcccgcccgccgcagccgagcgggtgccccgggggacg
gagggcggctgcggtgccggcggcaaggcggcacggccggagggtgccgccgaggcggcc
aagcagagcgcgctgcgctccagcccgcggggcatgtttcgcaggctgcagagctgctac
tgctgtgacgagaggacagagggcgaggaggcggccgaaaagccccggcggcacgaatgt
cacaaggccgagtccccgccgcaggagccggcgggcgacacgcaggagcactggctgcac
gaggcctgtgccgtatggaccgctggggttttcctggtggcggggaagctctacgggctg
caggaggccgtcaaggcggctgccgacctgaagtgctcgagctgccagcaagcaggagcc
accgtgggctgctgccagaaggggtgtccccacacctaccactacgcgtgtgccgtcgac
acaggttgcttattaacagaagagagcttctctctgaaatgtcccaaacataagaggcag
ccgatgtag
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