Calonectris borealis (Cory's shearwater): 142089244
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Entry
142089244 CDS
T11211
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00260
Glycine, serine and threonine metabolism
cbor00630
Glyoxylate and dicarboxylate metabolism
cbor00670
One carbon pool by folate
cbor01100
Metabolic pathways
cbor01200
Carbon metabolism
cbor01230
Biosynthesis of amino acids
cbor01240
Biosynthesis of cofactors
cbor04981
Folate transport and metabolism
Module
cbor_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
142089244 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
142089244 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
142089244 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
142089244 (SHMT1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
142089244 (SHMT1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
142089244
NCBI-ProteinID:
XP_075021566
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Position
16:complement(15026254..15033902)
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AA seq
483 aa
AA seq
DB search
MATQGNGGLPSAELWASHNKMVIEPLDSNDPEVHSIIKKEKQRQRLGLELIASENFASRA
VLEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYRLDPQKWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGY
IDYDQLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADANSAYLMADMAHISGLVAAGV
VPSPFDHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGL
QGGPHNHAIAGIAVALRQAMTPEFKAYQQQVVANCKTLSAALMELGYDIVTGGSDNHLIL
LDLRSRGTDGGRAERVLEICSIACNKNTCPGDISALRPSGLRFGTPALTSRGFRQDDFRV
VAQYIHRGIELTLRVQKDMSPKATLKEFKEKLEEEKYRRELKALKEEVEAFAATFPLPGL
PVL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcagggcaatgggggtctccccagcgcggagctctgggcctcccataataag
atggtaatagagccgctcgacagcaacgacccggaggtgcacagcatcatcaagaaggag
aagcagcggcagaggctggggctggagttaattgcgtcagagaactttgcgagccgagcg
gtcctggaggccctgggatcctgcatgaacaacaaatactccgagggctacccaggacag
aggtactatggtgggacggagtttgtagacgagctggaaaggctgtgccagaagcgagcc
ctgcaggcgtaccggctcgacccccagaagtggggcgtcaacgtccagccctactcaggg
tcacccgcgaactttgcggtgtacacggccctggtggagccccacggcaggatcatgggg
ctggacctgcccgatggaggccacctcacccatgggttcatgacggacaagaagaagatc
tctgccacctctgtcttcttcgagtccatgccctacaaggtcaaccccaagacgggttac
attgactacgatcagctggaggagaacgcccgcctcttccaccccaagctgatcatagca
ggtgtcagctgctactcgcgcaacctggactatgcccgcatgcggaagatcgccgatgcc
aacagtgcctatctcatggccgacatggcccacatcagcgggctggtggctgccggcgtg
gtgccctccccctttgatcactgcgacgttgtctccaccaccacccacaagaccttgcgg
ggctgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaagacg
ggcaaggaaacactctacaacctggagagcctcatcaaccaggcggtcttccccgggctg
cagggaggcccacacaaccatgccatcgcagggatcgcggtggcgctgcggcaggccatg
acgcccgagttcaaggcctaccagcagcaggtggtcgcgaactgcaagacgctctctgcg
gcgctgatggagctgggctacgacatcgtcacggggggctccgacaaccacctgattctg
ctggacctgcgcagcagaggcacggacggcggccgggccgagcgggtgctggaaatctgc
tccatcgcctgcaacaagaacacgtgccctggcgacatcagcgccctgcgccccagcggc
ctgcggttcgggacgccggctctcacttcccgcggcttccggcaggacgacttccgcgtg
gtggctcagtacatccacagagggatcgagctgacgctgcgcgtgcagaaggacatgagc
cccaaggccacgctgaaggaattcaaggagaaactggaggaggagaaataccgcagggag
ctgaaggcactgaaggaagaggtggaagccttcgcagcgaccttcccgctcccggggctg
cctgtcctgtaa
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