Calonectris borealis (Cory's shearwater): 142089399
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Entry
142089399 CDS
T11211
Symbol
RHBDL1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbor01002
]
142089399 (RHBDL1)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
142089399 (RHBDL1)
Peptidases and inhibitors [BR:
cbor01002
]
Serine peptidases
Family S54: Rhomboid family
142089399 (RHBDL1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
142089399
NCBI-ProteinID:
XP_075022002
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All DBs
Position
16:complement(20236138..20241769)
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AA seq
372 aa
AA seq
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MDRSSLLQLIQEQLDPENTGFIGVETFASLVHSHELPLDPAKLDMLVALAQGNDEGQVCY
QELVDLISSKRSSSFKRAIANGQRALPRDVLLDETGLGFYKRFVRYVAYEILPCEMDRRW
YFYQHRTCPPPVFMAAVTLTQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAW
RFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISFLYLAGVLAGSLTVSITDMRA
PLVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLP
ASGPQPSFMAHLAGAIVGISMGLTILRSYEESLQAQCGWWVLLLSYGTFLLFAVFWNIFA
YDLLGAQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagctccctgctccagctcatccaggagcagcttgaccccgaaaacaccggc
ttcatcggggtggagacgttcgccagcctcgtgcacagccatgagctgcccctggacccc
gccaagctggacatgctggtggccctggcacagggcaacgacgaggggcaggtctgctat
caggagctggtagacctgatcagcagcaagcgctcgagcagcttcaagcgtgccatcgcc
aacgggcaacgagccctgccccgcgacgtgctgctggacgagaccggcctgggcttctac
aagcgcttcgtccgctacgtggcctacgagatcctgccctgcgagatggaccggcgctgg
tacttctaccagcaccgcacgtgtccgccccccgtcttcatggcagccgtcaccctcacc
cagatcatcgtgttcctctgctacggggcccgcctgaacaagtgggtgctgcagacctac
caccccgagtacatgaagagtcccctggtctaccaccccgggcaccgggcgcgcgcctgg
cgcttcctcacctacatgttcatgcacgtggggctggagcagctggggttcaacgccctc
ctgcagctgatgatcggggtgcccctggagatggtccatggcatcctgcgcatcagcttc
ctctacctggccggcgtcctggcaggctccctcaccgtctccatcacggacatgcgggcc
cccctggtcgggggctcggggggggtctacgcgctctgctcggcccacctcgccaacgtc
gtcatgaactgggccgggatgcgctgcccctacaagctgctgcggatggtgctggcgctg
gtgtgcatgagctcggaggtgggtcgcgccgtctggcttcgtttctcccccccgttgccg
gcctcgggcccccagcccagcttcatggcccacttggcgggggccatcgtgggcatcagc
atggggctgaccatcctgcgcagctacgaggagagcctgcaggcccagtgcggctggtgg
gtgctgctcctctcctacggcaccttcctcctcttcgccgtcttctggaacatcttcgcc
tacgacttgctgggggcacagatcccccccccgccataa
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