Calonectris borealis (Cory's shearwater): 142089561
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Entry
142089561 CDS
T11211
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbor03041
]
142089561 (RBM39)
Spliceosome [BR:
cbor03041
]
Common components
Common spliceosomal components
General mRNP proteins
142089561 (RBM39)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
REC114-like
Motif
Other DBs
NCBI-GeneID:
142089561
NCBI-ProteinID:
XP_075022264
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Position
17:complement(474235..506893)
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AA seq
537 aa
AA seq
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MADDIDIEAMLEAPYKKDENKVSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAERRNSPVRNGLHTELDLQTRLSQQNEVLA
AAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGN
VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaagtgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacaggaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaaagaaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccgttctagaagtagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgctccagaagcaaaagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtattctgcatgcagctg
gctgcaagaattagaccaagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcggatagaaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgttagttcagtgccgctggcaataggactaactggacagagagtcttgggt
gtaccaatcatagtacaagcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggtagtgctggtcctatgaggctctatgtgggatcattacacttcaac
ataactgaagatatgcttcgaggaatttttgagccgtttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggacgctcaaaaggatatggatttattacgttctcagac
tctgagtgtgccaaaaaggccttggaacaactcaatggatttgagctggctggtaggcca
atgaaggttggacatgtaactgaacgcactgatgcttccagtgctagttcgtttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagctgatg
gcaagacttgcagaaggtacgggtttgcagattcccccagctgcacagcaggctctgcag
atgagtggatctttggcatttggagctgtggcagaaagaagaaacagtcctgttagaaat
gggctccacacagaactggatttgcaaacgagactatctcagcagaatgaagttctggct
gcagctgcttctgtacaaccacttgcaacacagtgcttccagctttccaacatgtttaat
cctcaaactgaagaagaagctggctgggatactgaaattaaagatgatgtgattgaggaa
tgtaacaaacatggaggagttatccacatctatgtagacaaaaactcagctcagggcaat
gtgtatgtcaaatgtccttcaattgctgctgccattgcagctgtaaatgcgttgcatggg
aggtggtttgcaggtaaaatgattacagcggcgtacgtacctcttccaacgtaccatagc
ctcttcccagattctatgactgcaacccaactactggttcctgttcgacgatga
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