Calonectris borealis (Cory's shearwater): 142089572
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Entry
142089572 CDS
T11211
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142089572 (CHD6)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142089572 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
142089572
NCBI-ProteinID:
XP_075022300
LinkDB
All DBs
Position
17:843645..940082
Genome browser
AA seq
2741 aa
AA seq
DB search
METRFACWGEIWLEPPSLKVLSRSPMSDAWECKAQDPFASSEEQDEVPQQVTVTATDTGG
QCQCPVEEPDGAPQKRTSTQNGMQDSGGGGTGVKKKRKKKDLGEQEGGEKAAVEVKPKRR
REPKEPKEPKKAKEPKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSCSEPAPRARPKKS
SKDTPLEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKY
NEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEA
HPGGLAFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPD
EDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEF
EALQIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNA
DWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLS
AEQGVSDGAQDAAERGSMEKEESGGEKLEALPKQEDIVAAGVGEASEKRDEPAAAQDGSD
SDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDEMFRRASEMDS
VNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYS
FVAMCKNVCGLPLWKEDGSPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHER
LKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
GLPGSETLCCLYQTNSKLYSSPLYSQVDRTCESLENEAESQIKLDTVDNAMSQAGGSPPD
ANCETFMSKVRDIISSNYDESSLPDSLVCMMFDEKACNSEQSSLARDSPSCTDVGSSVAK
LSEGKLEGDEDPSSCDADAMRETPFLEGFSGCDRMDSQNEEAEPSPSTPESNPSRSVPAE
LCEASQQKGDLTSPAPVLPEHGAMEGVISVGLYSPGLHNYEIKVPPEQRFINLLQQKGME
AKSGPSQSHSEEDEEEEEEDDNSEAAADVVESLSGPRTRASCDPEANELGGEEQSSGLPT
PEDTCPEDVNGERESLGLGTPEGLGDPGPEGRGDRGLDEESALPHSPGQARSQAFSLPAP
LLGAPGAGLPRPGGEAWGRGAERQAGCREALHPEPQGVKQEECENRDEGEKASSSQSQDG
PEKYLEEESKSSTSVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNIC
HAILKGKWPSSSQQFETQSLLTAPAVASNAGSRNSFAESEPPDPSFNNGVLLSQVQKEGF
LTPAFAKDERKHRRSYEFEMEREAKQRSLEQLAATHVHPPIVLNGWRDAAVDLSRASDAS
PGNSSPFPLNTNMPKLGTVNTLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRR
RRGRRKNVEGMDLIFLKERPLPTRLQDVQEDQPQPPQNSPLPDGPAAATSTPQPVPAAGS
QAEKAVPNKSLLDWLRQQSDYTLDVPGFGTNFSDKPKQRRQRCKDPSKLDVNSLTGEERV
PVVHKGTGRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPESKFNRILTEP
VLRDTGPRRRGRRPRSELLKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPL
TGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMTTTCTATAPT
SLTSTTKSGTANAEKATEDKQSSQDVKKETLSEDKPGPSSFSNQTESAITTSSPVAFNPF
LIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGESANPEPETV
SLPEKEAANSQNCTEQTPPLSAEKEQDGPAEEEREVARDTN
NT seq
8226 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgctttgcctgctggggtgaaatatggctggagccgccaagcttaaaagtg
ctgagccgctccccaatgtcggatgcctgggagtgcaaggcgcaggacccctttgccagc
agcgaggagcaggacgaggtgccccagcaggtgacggtgacggccacggacacgggcggc
cagtgccagtgcccagtggaggagcctgacggggctccccagaagcggacgagcacccag
aacgggatgcaggacagtgggggcgggggcacgggagtgaagaagaaacggaagaaaaag
gatctgggagagcaggaagggggagaaaaagcagctgtggaggtgaaaccaaagaggagg
agagagcctaaagaaccaaaagagcctaaaaaggctaaggagcccaagaagccgaaggag
cccaagcagagagaggtggccaagaagccccggaaacctcgggaacccaaagcccccaag
gaacctaaagacaagaagagctgctctgagcctgcccccagagcaagacccaagaagagc
agcaaggacacccctttggagaagaagaagaaagggaagaggaaaaatgagataccagtg
gacagtttggatttggatcaggatctcctgagcccatccgtgcagagcccagaggagtct
gcggagtcggccgacagccagaagcgccgctcaggacggcaagtgaagaggaggaagtac
aacgaggacctggatttcaaggtggtggatgatgacggcgagacaatagccgtgctggga
gctgggcgaacctctgcgctctctgcctctactctggcatggcaggcagaggagcctccc
gaggatgatgccaatatcattgagaagatccttgcctccaggatggtgcagaaggaggct
catcctggaggcctggcgtttgagatggaggagttctacgtcaagtacaggaacttctcc
tacctccactgtaagtgggcgactctggaggagctggagaaggaccccaggatctcccag
aagataaagcgcttccggaacaagcaggctcagatgaagcatatttttacagagcctgat
gaggatttgttcaacccggactatgtggaggtagatcgaattctggaggtggctcacacg
aaggaccctgacaccggggaggaggtgactcactacctggtgaagtggtgctccctgccc
tacgaggagagcacgtgggagctggaggaggatgtcgacccagggaagattaaagagttt
gaagccctccaaatccctccagaaatcaagcacatggtaacgtacccagaggagcgcccg
gcatctgagtcctggcagaaactggagaagtcccgggagtataagaacagcaaccagctg
cgggagtatcagctggagggaatgaactggctgctctttaactggtataacaggaagaac
tgcatcctggctgacgagatgggactggggaagacaatccagtcaatcaccttcctctca
gaaatattcctgatgggcatccatggccccttcctcatcatcgcacctctctccaccatc
accaactgggagagggagttccgcacctggacggagatgaatgccattgtgtaccacggc
agccagatcagccggcagatgatccagcagtacgagatggtgtacagggacgcgcagggt
aaccctctccctgggatcttcaagttccaggtggttatcaccacctttgagatgatcctt
gcggactgcccggagctgaagaagatccagtggcgctgtgtggtcattgacgaggcacat
cgcctgaagaacaggaactgcaagctcctggaggggctgaagctcatggccctggagcac
aaggtgctgctgacagggacccccctgcagaattcggtggaggagctcttcagcctcctg
aatttcctggagccacagcagttcccctcagagacagccttcctggaggagtttggagac
ctgaagacagaggagcaggtgaagaagctgcagtctatcctgaagcccatgatgctgcga
cggctgaaggatgatgtagagaagaatctggcacccaagcaggagaccatcattgaggtg
gagctgaccaatatccagaagaaatactaccgggccatcctggagaagaacttctccttc
ctctccaagggtgccaaccagcacaatatgcccaacctcatcaacactatgatggagttg
cggaagtgctgcaatcacccatatctcatcaacggcgcagaggagaagatcctggaagac
ttccgtaaaacacacagcccggaggcgcccgacttccagctgcaggcgatgatccaggcg
gccgggaagctggtgctcattgataagctgcttcctaagctgatcgctggtgggcacaag
gtgctcatcttctcccagatggtgcgctgtctcgacatcctggaggactatctcattcag
aggcggtacacctatgagcgcattgatgggcgggtgcgggggaacctgcgccaagctgcc
atcgaccgcttctgcaagcctgactcggatcgcttcgtctttctcctgtgcacacgggcg
ggcgggctgggcatcaacctgaccgctgccgacacctgcatcatctttgattcagactgg
aacccacagaacgacctccaggctcaagctcgctgccaccggatcgggcagagcaaggcg
gtgaaagtctatcgcctcatcaccaggaactcctacgagcgggagatgttcgacaaggcc
agcctgaagctgggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcacc
aacggggttcagcagctctcaaagatggaggtggaggacctgctgcggaagggtgcctac
ggcgctctcatggacgaggaggatgaaggatcaaagttctgcgaggaagacattgatcag
atcctccagcgcaggacacagaccatcacgatccagtctgaggggaagggttccaccttt
gccaaggccagcttcgtagcatcaggaaacagaactgacatttccttagatgaccccaac
ttctggcaaaagtgggccaagatagcagagctcgatacagacgccaagaatgaaaaggag
agcctggtcatcgacaggccccgggtgcggaagcaaaccaaacactacaactccttcgaa
gaggatgagctgatggagttctccgagctggacagtgactcggatgagcgacccacacgc
tcgcggcgcttcaacgagaagacacggcggtacctgcgggctgagtgcttccgcgtggag
aagaacctgctcatattcggctggggacgctggaaagatatcctgacccacgggcggttc
aagtggcacctgaatgagaaggacatggagatgatttgtcgggccttgctggtctattgc
gtcaaacactacaagggggatgagaagattaagagttttatctgggatctcatcacgcca
acaaaggacggccagaaccaggctctgcagaatcactcaggcttgtcagcaccagtgccc
agaggcaggaaggggaagaagacgaagaaccagatgctgcttcccgagataaagaacgcg
gactggctcgccacctgcaaccctgaggtcgtcctgcatgacgacagctacaagaagcac
ctcaaacagcactgcaacaaggttctgctgcgggtgcgaatgctctactacctgaaggct
gaagtgctgggggaggctgcggacaaagccttcgaggggacccccgccagggagctggac
gtgctgctgccagacattgactacgtggagatcccagtggactggtggaacgccgaagcc
gataaatccctgctcattggcgtcttcaagcacggttacgagaggtacaatgccatgcgg
gcggacccagcgctgtgctttctggagaaggtgggcatgccggacgagaagcttctctct
gcggagcagggcgtcagcgatggggcccaggatgctgccgaaaggggcagcatggaaaag
gaagagagcggtggagaaaagctggaggcgctgccaaagcaggaggacatcgtggctgct
ggggtgggcgaagccagtgagaagcgggacgagccagcggcagcccaggatggctccgac
tcagacagatcctgctggcctgtctcatctgccctcacagccagactgcggaggcttgtc
accgtctaccagcgctgcaaccgcaaagagctgcctccccgtgccgagatgctggtgccc
ggtaaccatggatactggctgcaggacgagatgttcaggagagcctctgagatggactcg
gtgaacaaagaaatgcagaaaaggtggaccaggagggagcaggcagatttctaccgcact
gtctcctcctttggggttatctatgaccaggagaaaaagatctttgactgggcccagttc
cgagccatctctcgactggagaagaagacagatgagagcctggagaagtacttttacagc
tttgtggccatgtgcaagaatgtctgtggtctcccactgtggaaagaggatggttcccca
gaccctgacatctacgtggagcccatcacggaggaacgggctgccagaaccctctaccgt
atcgagcttctgcgaaaggtgcgcgagcaggtgctcaagtgtccgcagctccacgagcgg
ctcaagctgtgccggccgagcctctacctgccggtgtggtgggagtgtggcaaacatgat
cgggacctgctgatcggcaccgccaagcatggcctgaatcgcactgactactacatcatg
aatgacccccagctgtcttttttagatgcgtacaggaactatgcccagcataaaagaacg
gggctcccaggctcagaaaccctgtgctgcctttaccagactaactccaaactctacagt
tcccctctgtacagccaggtggaccggacttgcgagtccctggagaatgaagctgagagt
cagatcaagctagacaccgtagacaacgctatgtcccaggctgggggcagcccaccggat
gcaaactgtgagacattcatgtctaaagtccgggacatcatttccagtaactatgatgag
agctctctgccggactcgctggtgtgcatgatgttcgatgagaaggcctgcaacagtgag
caaagctcccttgcccgagacagcccaagttgcacagatgttggaagcagcgttgctaaa
ctctctgagggcaagctagagggggatgaggatccgtccagctgcgatgcagatgccatg
agagagactcccttcctagaaggtttttcgggctgtgaccgaatggacagtcagaacgag
gaagctgaaccttcaccttctacccctgaaagcaacccttcacggagcgttccagcagag
ctctgcgaagcctcgcagcagaagggagacctcaccagccccgcgccagtgctgcctgag
catggtgccatggaaggggtcataagtgtggggctctacagtcccggtctgcataactat
gaaataaaggttcctcctgagcagaggttcatcaatctgctgcagcagaaaggaatggag
gcaaagtcagggccaagtcagagccacagcgaggaagatgaggaggaagaagaggaggat
gataactcagaggcggcagcagatgttgtggaaagcttgagtggtcccaggaccagggcc
agctgtgaccctgaggctaatgaactggggggcgaggagcagagctctggcctccccaca
cccgaggacacttgcccagaagacgtgaatggcgagagagagtccctggggctggggaca
cccgaagggctgggggaccctgggccagagggcaggggggatcgtggcctggatgaggag
agcgccctgccgcactcaccgggccaggctcggagccaggctttcagcctgcctgcacct
ctactgggggcccccggggcagggctcccccgccctgggggggaggcctggggccgaggg
gctgagaggcaggcaggctgcagagaggccctgcaccccgagccccagggggtgaagcaa
gaagagtgtgagaacagagatgagggggagaaagccagcagcagccagagtcaagatggt
ccggagaagtacttggaggaagagagcaagagttctacttctgtcctgcccggggagatc
gatgaccttcaggatgcccgggcaccgaccatcgcccagctgctgcaggagaagacactt
tactccttctctgagtggcctaaggaccgtgtgatcatcaaccgcattgacaacatctgc
catgccatcctgaagggcaagtggccttcctccagccagcagtttgagacacaaagcctg
ctgacggctccagcggtagccagcaatgccggcagcaggaacagctttgccgagtcagaa
ccccctgatcccagcttcaataacggggtgttactctcacaggtacaaaaggaaggtttc
ctgacccctgcctttgcaaaggacgagcggaagcacaggaggtcctatgaatttgagatg
gagagagaggccaaacagaggagcttggagcagctagcagcaacccatgttcatccaccc
attgtgctgaacggctggcgcgatgcagcggtggatttgtccagagcctctgatgcgtcc
ccagggaactcctctcctttccccctgaacacaaacatgcccaagctggggaccgtgaac
accctccagggctccctgggcatggacttgtctggcatcctccaggcagggttaatccat
cctgtcacgggacaaattgtaaatggcagcctacgaagagacgatgctgccatgaggagg
agacggggcaggagaaaaaatgtagaagggatggacctcatcttcttgaaggagaggcct
cttccaaccaggctgcaggatgttcaggaagaccagccgcagcccccccagaacagtccc
ctccccgatggaccggctgctgctacctcaactccacagcccgtcccagctgcaggcagc
caagccgagaaggctgtcccgaataagagtctgctcgactggctccgacagcagtccgac
tacacactcgacgttcccggctttggcacaaatttttcagacaagcccaagcagaggagg
caacgctgcaaggaccccagcaaattggacgttaactcactcacgggagaggagcgggtg
cctgtggtacataagggtaccggacggcggttagggggagccacagcaccagcattgaag
gaattgccaaggtggcttgatgcaaacttggagtatgctgttgcagctgactgggctgac
attgttaagctttcaggctacttaccggaaagcaaattcaatcgcatcctaaccgagcct
gtgctccgagacacggggccgcgccggagggggagaaggccccgaagcgaactgcttaaa
ggccccggtgttgtagcagattcttcttctggaatgggaccattgttcatgaatggactg
attgctgggatggatctagtaggacttcagaacatgagaaacatgcaagggatccctctg
accgggctggttgggtttcctgctggatttgcagcagtgcccgccggcgaggatgtgaaa
agcaccctgagtatgttgcccatgatgctgccgggcatggctaccgtaccacagatgttt
ggcgttggaggacttctcaacccccccatgacaactacttgtactgcgactgctccgact
tcgttaacaagcacaacgaaaagtggtacagccaacgcagagaaagctactgaggataaa
cagagtagccaggatgtgaaaaaagaaactctctcggaagataagcctggtcctagttcg
ttttctaatcagacagaatccgcaataactaccagtagtcctgtagcttttaacccgttt
cttatcccagggatgtctcctggactgatctatccctcaatgtttctttcccctggcatc
ggcatggcgctgcccggcatacagcaaaccagacactcggaggcagcaaacctggaaagc
cagaagcggaagagaaagaaagcaaaaggggaatcggcaaacccagagccagaaactgtc
tcgctgccggaaaaagaagctgcaaacagtcaaaactgtacagagcagacaccgcctttg
tcggcagagaaagagcaggacggaccagcagaggaggagcgcgaagtggctcgtgatacc
aattag
DBGET
integrated database retrieval system
