Calonectris borealis (Cory's shearwater): 142089628
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Entry
142089628 CDS
T11211
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbor01009
]
142089628 (PTPRT)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
142089628 (PTPRT)
Protein phosphatases and associated proteins [BR:
cbor01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
142089628 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
TM_ErbB1
PTP_tm
ig
PTP-NADK
Ig_3
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
142089628
NCBI-ProteinID:
XP_075022424
LinkDB
All DBs
Position
17:3961552..4420039
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AA seq
1462 aa
AA seq
DB search
MTGVAAIVFLLQLLPKAEGQVFAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQY
QYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKG
ASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLTIKRRRNAYSYSYYLHSSQC
FRGLSVFYRTRKLAKKQKETQTSTQREMGPVATSDKTSTKLSAVHNEEAFSSSCQDVNGF
ISSDTVPSTTLLDSSHGEMTQPTLTIQTHPYRSCEPVEMSYPRGQFQPAIRVADLLQHIT
QMKRGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPH
SDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVR
YWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYA
TGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVREL
RSQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEF
QTLNIVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDS
HKQPAAFIVTQHPLPNTIADFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPI
QVEFVSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRR
LEKWQEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSN
MVESLEQYKFVYEVALEYLSSF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtcgccgcgatcgtctttctcctgcagctcttgcccaaggcggagggacag
gtcttcgcaggtggttgttcatttgatgagcactacagtaattgtggttatagtgtggcc
ttgggaaccaatggatttacctgggagcagatcaatacctgggaaaagccaacaatggat
cctgctgtcccaactggctccttcatgatggtgaacagctctgggcgggcatctgggcag
aaagctcacttgctgttgcctacgctgaaggaaaatgacactcactgcatcgacttccac
tattacttatccagcagagaccgttcgagtcctggctctctgaatgtctacgtgaaggtg
aatggaggaccacagggcaatcccatatggaacgtctcgggggttgttacagaaggctgg
gtgaaagcagaacttgccatcagtacgttttggccacatttttatcaggtgatatttgaa
tctgtctctttgaaaggacatccagggtacatagctgtggatgaagtcagagttctcgcc
catccatgcagaaaagcacctcatttcctacgacttcagaacgtggaggttaatgtagga
cagaacgcgacattccagtgcattgctggcgggaagtggtcgcagcatgacaaactctgg
ctccagcagtggaatggaagggacacagcattaatggtcactcgagtggtcaaccacaga
cgtttttctgctactgtcagtgtagctgacacctctcaacgcagtatcagcaagtaccga
tgtgtcattcgttcagatggtggatctggagtttcgaattatgcagaattaatagtgaaa
gaacccccaactcctatcgcccctcctgagctgctggctgtcggagccacgtacctgtgg
atcaaacccaacgccaactccatcattggagatgggcccatcatattgaaggaggtggag
tatcggacgaccactgggaattgggcggaaacgcacattgtagactctcctaattacaaa
ctgtggcatttggatcctgatgtggagtatgagatcagagtgctgctcactcgccctgga
gaaggaggcacggggccccctggaccaccactcacaacaagaacaaaatgtgcagatccg
gtccatggaccacaaaacgtagaagttgttgatattcgctcccggcagctgacgctgcag
tgggagccctttggttatgcggtgacccgctgccacagctacaatctcacagtccagtac
cagtacgtgtttaaccagcaaaaatttgaggcagaggaactcatccagacttcttcccac
tacaccttgcgaggtcttcggcccttcatgaccatcaggctgaggttagccctctctaac
ccagagggcaaaatggaaagtgaggagttggttgtgcagactgaggaagatgttcctgga
cccgttcccttggaatctatccagggaggaccttttgaagagaagatctatgttcagtgg
aagcctccaaatgagacaaatggcatcattacactctatgagattacgtacaaggccgtt
gggtctctggatcccagtgctgacctgtccagccaaagagggaaagtcttcaaactaagg
aatgaaacacatcacctctttgtaggattatacccagggactacgtattcattcaccatc
aaagccagcacagtcaagggctttgggccacccatcacaacacggattgcaactaagatt
tcagcaccgtcgatgccagaatacgacacggactcccccctgaatgagactgacactacc
atcaccgttatgctgaagcccgctcagtcccggggagcccctgtcagtgtctatcaactt
gttgtcaaggaggagaagctgcagaaagcacggagagctgcagacatcattgaatgcttc
tctgtccccgtgagctacaagaacgcttccagtcttgactcaccgcactactttgccgcc
gagctgaaacccatcaacctgcccgtcacacagccgttcacggtgggcgacaacaaaacc
tacaacggctactggaatgctccactttctcccctgaaaagctacagcatatacttccag
gctcttagcaaggcaaatggagaaacaaaaatcaactgtgtccggctggcaacaaaagga
gcttccacccagaattccaatgcagtggaaccagaaaaacaagttgacagcacggtgaaa
atggccggagttatagctggtcttctgatgtttgttattatcctcttgggagcaatgctt
actatcaagagaagaagaaatgcatattcctactcctattacttgcattcaagccaatgt
tttaggggcctctctgtcttctacaggaccaggaagctagccaagaagcagaaggagact
cagaccagcacgcagagggagatgggtcccgtggctacctccgacaagacctctaccaaa
ctcagtgctgttcacaatgaagaagctttttcttccagctgccaagatgttaatggattc
atatcatcagacactgttccatcgaccacgcttttagacagtagccatggagagatgacc
cagccaaccctgactatccagacccacccgtaccggagctgcgagccggtggaaatgtcc
taccctcggggacagttccagccagccatccgagtggccgacctgctgcagcacatcacc
cagatgaagcgaggacagggctatggatttaaagaggagtatgaggcactacccgagggg
cagacagcatcctgggatacagccaaggaagatgaaaaccgcaataagaacagatatgga
aacataatctcctatgatcattcaagagtgagattgcaactgctggatggggaccctcac
tctgactacataaacgccaattacatagacgggtaccaccggcctcgccattacattgca
actcaagggccgatgcaagagacagtgaaggatttctggagaatgatttggcaagaaaac
tctgcaagtgttgtcatggtcaccaacttggtggaagtgggcagggtaaagtgtgttcga
tactggccagatgacacagaggtctatggagatattaaagtcacattaattgagacagaa
ccattggcagagtatgtcatacgcacatttactgtacaaaagaaaggctaccatgagatc
cgagagattcggcagttccacttcaccagctggccggaccacggggttccctgctatgcc
acaggcctcctgggcttcgttcgtcaggtgaagttcctcaatcccccggaagcaggaccc
atcgttgtgcactgcagtgctggggccgggagaacagggtgctttattgccatcgacatc
atgcttgacatggcagagaacgaaggtgtggtggatatatttaactgtgtgcgagagctg
cgatcccaaagggtcaatttggtgcagacggaggagcagtatgtatttgtccatgatgcc
attttggaggcgtgtctctgtggcaacacggccattccagtttgtgagttcagatccata
tattacaacatcagcagactagatccacagaccaattccagccagataaaagatgagttt
cagactcttaatattgtgacaccgcgtgttcggccagaagattgcagcatcggtcttttg
ccaaggaaccatgacaagaaccgctgcatggatgtgttgcccctggaccggtgcctgcct
ttcctcatctccgtggatggcgaatcaagtaactacatcaatgctgcactcatggatagc
cacaagcaacctgctgcctttattgtaacccagcaccctttgcccaacaccatagcagac
ttctggaggctggtgtttgattataactgctcctctgttgtgatgctgaatgagatggat
gcagcgcagctctgcatgcagtactggccagagaagacgtcctgttgttatggcccaatt
caagtagagtttgtttcagcagacatcgatgaagatatcatcaaccggatattccggatc
tgcaacatggccaggcctcaggacggatatcgcatcgttcagcacctgcagtacattggc
tggccagcgtacagggacacccctccttccaaacgctccctcctgaaggtggtcagaagg
ttggagaagtggcaggaacagtacgatgggagagacggacgcactgttgtccactgcctg
aatggtgggggacgcagtggcaccttctgcgccatctgcagcgtgtgtgaaatgattcaa
cagcaaaatatcattgatgtgttccacatagtgaaaacgttacggaataacaaatccaac
atggtggagtcactggaacagtataaatttgtatatgaggttgcactggaatacttgagt
tccttttag
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integrated database retrieval system
