Calonectris borealis (Cory's shearwater): 142089742
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Entry
142089742 CDS
T11211
Symbol
STX16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
142089742 (STX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142089742 (STX16)
Membrane trafficking [BR:
cbor04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
142089742 (STX16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin
MCPsignal
Syntaxin_2
DUF5345
DUF2116
DUF3140
DUF4191
Orf78
DUF6548
TRP
Prominin
EVI2A
T3SS_needle_E
Motif
Other DBs
NCBI-GeneID:
142089742
NCBI-ProteinID:
XP_075022691
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All DBs
Position
17:12479965..12493919
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AA seq
322 aa
AA seq
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MATRRLTDAFLLLRNNAVQSRQLLAEQVSSYGSSSPLSSRSMAAALADDRMALVSGISLD
PEAAIGVTKRLPPKWVDGADEIQYDIARVKQKMKELASLHDKHLNRPTLDDSSEEERAIE
ITTQEITQLFHRCQRAVQVLQSRSRSCTEQEARVLRNVVSSLAQSLQDLSTNFRHAQSDY
LKRMKNREERSKHFFDTSVPLMDDGEDDTLYDRGFTDDQLALVEQNTLMVEEREREIRQI
VQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCMKTEEGLKQLHKAEQYQKKNRKML
VILILFVIVIVLIVVLIGVKSH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccacccggcgtctaacggacgcgttcttgttgttgcggaacaacgcggtgcagagc
cggcagctgctggccgagcaagtgagtagttacggctcctccagccctctgagttcacgt
agcatggctgctgcgcttgctgatgatcgtatggcactggtatcaggaataagtttagat
cccgaagcagcaattggagtaacaaaacgcttacctcccaaatgggttgatggagcagac
gaaattcagtatgatatcgccagggttaaacagaagatgaaagaattagccagtcttcat
gataaacatctaaacagaccaacactggatgacagcagtgaagaagaacgggcaatagaa
ataacaacccaagagatcacacagttatttcacagatgtcagagagcagtccaggtcttg
cagagcaggtcacgtagttgtacagaacaagaagcacgtgttctcaggaatgtagtgtct
tccttagcacagtcccttcaggacctatccaccaactttaggcatgcacagtctgactat
ctcaaacgcatgaagaatagagaagaaagatccaaacacttcttcgacacctcagtccca
ctgatggatgatggggaggatgatacactttacgatagaggttttacagatgaccagcta
gcattggtggagcaaaacacattaatggtggaagagcgggaacgagaaatccgtcaaatt
gtacagtccatctcggatcttaatgaaatatttagggacctgggagcaatgatagtagaa
cagggaacagttctagatagaattgactacaatgtcgaacagtcatgtatgaaaactgaa
gagggtctaaaacaactacataaggcagagcaatatcaaaagaagaatcggaagatgctt
gttattttaattttgtttgttatagtaattgtccttattgttgttcttattggtgtaaag
tcacactag
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