Calonectris borealis (Cory's shearwater): 142089768
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Entry
142089768 CDS
T11211
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142089768 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142089768 (TAF4)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142089768 (TAF4)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142089768 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
142089768 (TAF4)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
142089768 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
142089768
NCBI-ProteinID:
XP_075022744
LinkDB
All DBs
Position
17:complement(14062679..14101151)
Genome browser
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSSSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTT
VQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGPGSVGKGNTVNAVLPSA
SNTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGTGAPTVTLVRPPIHTAGPTVAAAGAA
TQNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSTVPAAPATQVIKSESPK
TIVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGT
ANTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQ
LLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTT
IIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTAT
STAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLY
RELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQKNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcagcagcaagatgggactgagtgcccca
gagatcacaaaagcaggagctggaggagtgcaagggggcgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtg
gttatcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacaaca
gtgcaaactctgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgct
ttctctgggactcctgtgactgctaaccccgcttctgcacctgctgttgcccctctcgtt
aacaatggacctggatctgtggggaaaggaaatactgttaatgctgttttgccgtcagct
tccaacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcttcctcc
tcgcccacagttatctcctcgcagccaccaccaagcattggaactggggcgcctacggta
acgctcgtgaggccaccgattcacacagcaggacccacagtagctgcagctggtgcagcc
actcaaaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgct
gttgctacagccactgtgggatctggagtttccctccagacatcgcttgtgaacagccag
tctggttccactgtgccagcagctcccgccacacaggtcatcaaatctgagtctcctaaa
actatagtccaggcagtatcccaacagcagacgctggctactggtggccagcccagtact
acagggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctccc
aatcctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcact
gccaataccgtggcacaaagtctgccaaggactccaacagcaactacgagtggaatcaga
gcaactttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaact
aacattcagaattttcagttaccaccaggcatggtccttgtgcgaagtgagaatgggcag
ttgctgatgatccctcaacaagccttggcgcagatgcaagcacaggcacatgcccagtct
cagcctcaaaatactatgactcctcgtcctgctacacctaccagtgctcctccagtgcag
atatcaaccgtgcaggctccaggaacgcctattattgcacgacaggtgacaccaactact
attatcaagcaagtgtctcaggctcaaacaacagtgcaacccacaacaacgctacagcgt
cctcctgttgtgcaacctcagattgttctgggtggtactgcacaaacaactacgttgggg
acagcaacagctgtacaaactggaactcctcagagaacagtgcaaggaacaacggcaacc
tccactgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccaca
ttaataaaactggcatcatctggaaaacagtcttcagagactgcagctaacgtgaaagaa
ttggtacagaacctgctggatggaaaaattgaagcggaagactttaccagtaggctgtac
agagaacttaattcttcacctcaaccttatcttgtgcctttcctgaagaggagtttacct
gccttgagacagttaacaccagactctgcagctttcattcaacaaagtcaacagcaacag
ccaacaacgcaagcaacgatagcaacgattccatctgcagcggtgcttctaagctcctca
gttcagcgcacagcagggaaggcaactgcaactgtaacgagtactctccaacaacctgta
atcagcctaactcagcctacacaagttggtgttagtaaacaagggcagtctacaccactg
gttatccaacagtctcaaaaagcaggggcattgataaggcctccacaggtaacgttgaca
caaacaccaatggtagcattgcggcaaccacatagtcgtattatgctcaccactcctcaa
attcaactgaatcaacttcagacagtacctgttgtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcggaagaaagtgctcggatattggcaacaaactctgagctagtgggcaca
ttaacaagatcctgtaaagacgaaaccttccttttcccggcacctttacaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaattatcagagactgctcaa
caaaagaatatttcttacaaggatgatgaaagatacgaacaagcaagtgatgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgtgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggaaatgcagcaacaagagctagcacagatgagacagagg
gatgccaacttgactgcattagctgcgatcggtcccagaaagaaaaggaaagtagattca
ccgggatctggatcagggacagagggatctggttcaagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatataaagca
ttccttaagtaa
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integrated database retrieval system
