Calonectris borealis (Cory's shearwater): 142089959
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Entry
142089959 CDS
T11211
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
142089959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142089959
Transporters [BR:
cbor02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
142089959
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
142089959
NCBI-ProteinID:
XP_075023199
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Position
18:6733694..6741611
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AA seq
591 aa
AA seq
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MAEQPCPAPAASPPRQGTAPGPGPMAGPAPPRPQTHPRDKWSKKMDFLLSVVGFAVDLGN
VWRFPYICYQNGGGAFLIPYTLMAVFGGVPLFYMELALGQFHRTGAIPIWKRICPIFKGI
GFAICIIGLYVSFYYNTIIAWALYYFYSSFSGTLPWASCDNPWNTPHCTNYFGRSNVTWT
NFSRSPAEEFYTRKVLEIQKSRGLYDVGGIHWQLLLCLFLIFTIVYFSLWKGVKTSGKVV
WVTATLPYLVLLILLVRGATLPGAWRGVVFYLRPDWGKLLSTAVWVDAAAQIFFSLGPGF
GVLLALASYNHFHNNCYRDALVTSVVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVARDK
GPSLLFITYPEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAVITAVMDEYPQVLAGR
RELFVLGLITICFLGSLSTLTYGGAYVVKLLEEFGAGCSILAVVLLETIAVSWFYGIQRF
SHDVKAMLGFTPGMFWKVCWAAVSPALLAFIVVSSLLDQPPLTLFDYQYPEWSISVGYLI
GASSFICIPFYMVYKLVWTPGSLKQRLAICIRPEKTTRDPQAEAVCMSPLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagccctgcccggcgcccgccgccagccctccccggcagggcacggccccc
ggcccgggtcccatggccggccccgcgcccccgcggccccaaacccaccccagggacaag
tggagcaaaaaaatggatttcctcctctcggtcgtcggattcgctgtcgacctgggcaac
gtctggcggttcccttacatctgctaccaaaacggaggaggagcctttctcatcccgtac
acactgatggctgttttcggaggggtgcccctcttctacatggagctggccctggggcag
ttccacaggacgggcgccatccccatctggaaacgcatctgccccatctttaaaggcatc
ggctttgccatttgcatcattggcctgtacgtctccttctactacaacaccatcatcgcc
tgggctctctactacttctactcgtccttctcgggcaccctgccctgggcgagctgcgac
aacccctggaacacgccccactgcaccaactacttcgggaggagcaacgtgacctggacc
aacttctccaggtcccctgctgaagagttctatacgaggaaggtcctggagatccagaag
tccaggggtctgtacgacgtgggggggatccactggcagctgctcctctgcctcttcctc
atcttcaccattgtctacttcagcctgtggaaaggggtgaaaacctctgggaaggtggtg
tgggtgacggccacgctgccctacctcgtcctcctcatcctgctggtccggggggccacc
ctgcccggcgcctggagaggggtcgtcttctacctgcgcccggactggggcaagctcctg
agcaccgcagtttgggttgatgctgctgcgcagatattcttctccttgggccctggattt
ggtgtccttcttgctctcgccagttacaaccatttccacaacaactgctaccgggacgcg
ctcgtcaccagcgtggtgaactgcctcaccagcttcctctcgggcttcgtcatcttcacc
gtgctgggctacatggctgagatgagggacgtggaggtggaggatgtagcgagagataaa
gggccgagtctccttttcatcacctaccctgaagcaatcgccaacatggtgggatccacc
ttctttgccatcatattcttcctgatgatgataacgctggggctggacagcacgtttggg
ggcttggaggccgtgatcacggctgtgatggacgagtacccccaggtcctggccgggcga
cgggagctcttcgtcctcggcctcatcacaatctgtttcctgggctccctgagcaccctc
acctacgggggagcctacgtggtgaagctgctggaggagttcggtgctggctgctcaatc
ctggcggtggtgctactggaaacgatagccgtctcctggttttacgggatacagaggttc
tcccatgacgtgaaagccatgctgggcttcaccccggggatgttctggaaggtgtgctgg
gccgccgtcagccccgccttgttagcgttcatagtcgtcagctccctcctggaccagccg
cctctgacactcttcgactatcagtaccccgagtggagcatctcggtggggtacctcata
ggagcatcgtccttcatctgcatccccttctacatggtgtacaagctcgtctggacgccg
gggtctctcaagcagcgcctcgccatctgcattcggccagagaaaacaacacgagacccc
caagcagaggcggtgtgcatgtcacctctcctgtag
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