Calonectris borealis (Cory's shearwater): 142090030
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Entry
142090030 CDS
T11211
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142090030 (LHX5)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
142090030 (LHX5)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
142090030
NCBI-ProteinID:
XP_075023361
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All DBs
Position
18:3645775..3653133
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPHGP
PSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYTDMISHPDTPSPEPGMTGS
LHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNPELSEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccggttcctgctgaacgtc
ttggacagggcttggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctgacc
gagaaatgcttctccagggaaggcaaactctactgcaaaaatgactttttcaggaggttt
ggtaccaaatgcgccggctgctcccaaggcatctcccccagcgacctcgtccggaaagcc
cggaacaaagtctttcacctgaactgtttcacctgcatggtctgcaacaagcagctctcc
acgggcgaggaactctatatcatagacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggcagcctcaactcagtgtcctcatgtacagacaggagt
ttgtccccggatctccaggaccccatgcaggacgacaccaaggagacggacaactcgacc
tcctcggacaaggagaccaccaacaacgagaacgaggagcagaactcgggcaccaagcgg
aggggaccccgcaccaccattaaagccaagcagctggagaccctcaaagctgccttcgct
gccacccccaaacccacccgccacatccgagagcagctggcccaggagaccggcctcaac
atgagagtcatccaggtctggttccagaaccgccggtccaaggagcggcggatgaagcag
ctgagcgcgctgggcgcccgccggcacgccttcttccgcagcccgcgcaggatgcggccc
ctcggcggccgcctcgacgagtccgagatgctcggctcgacgccctacacgtactacgga
gattaccaaggtgactactatggaccgggaggcaactatgactttttcccccatgggccg
ccctcccaagcccagtccccggccgactccagctaccttcagaactcaggacccggctcc
acgcccctgggacccttggagccccccctaagcggacaccactcctcagaaaaccaaagg
tacacggatatgatctcgcatcccgacacccccagccccgagccggggatgaccggttcg
ctgcaccccatcccgggggaggtcttcagcggggggcccagcccgcccttctccatgtcc
agcaatagcggctacagcggggctctctcgcaccccaacccggagctcagcgaggcggcg
gtgtggtag
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