Calonectris borealis (Cory's shearwater): 142090085
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Entry
142090085 CDS
T11211
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
142090085 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142090085 (DEPDC5)
Membrane trafficking [BR:
cbor04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
142090085 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
142090085
NCBI-ProteinID:
XP_075023502
LinkDB
All DBs
Position
18:4988487..5036608
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AA seq
1602 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPETHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FSRSVRERESRTRKSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPH
LHQCEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELL
ELAYHEATGRHISSRHPGDSVSFLSFSGTEEYSNGLAGSNGAGMNLKTQNKDSLEDAVSN
SPDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLP
EADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPATTVPPPLSSSPLYSRG
LVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDS
EFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRI
MEGEVHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAG
PIPTHSLEQSGPPIGKKGTSALSALLQMEASQKTLGEQQAAMLSGKSSGQPSESGSIAIT
PTYMDSPRKDGAFFMDFVRSPRTASTFYSQVSIDQSVPATSDGNTLINTGQLPDRGNMQT
LGSSQSVADQGYTTAGAAEGSSQQCSTSTLTSSSTLIEILEAMKHPTTGIQLLSEQKGLS
PYCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKMV
VDKEPDRVGMQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNA
AFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIP
LNVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAENKPQY
IHVTGTVFLQLPYSKRKFSCGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSS
ATGDEKFADRLLKDFTDFCWNKDSRLVLFWTDCLDKMHASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacataagaagggttttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatcccaatgatgaatacagtcccctgcttctacaagtgaagtcacttaaggaa
gatttgcagaaagaaactataagcgtggatcagacagttgcacaagtgttccgactgcgg
ccataccaggatgtccatgtgaatgttgttgacccaaaggaggtgaccttggacttggtg
gagctaacctttaaagatcagtatatcgggcgcggggatatgtggcgactgaagaaaagt
ttggtcagcacatgtgcatatgtcacccaaaaagtcgaatttgcgggtatcagggcgcag
gcaggtgaactgtgggtaaagagtgagaaagtcacttgtggatacatcagtgaggacacc
cgggtggtcttccgctccacctctgccatggtttatatttttatccagatgagctgtgaa
atgtgggattttgatatttatggggacctttactttgagaaagctgtgaacggtttcctt
gctgacctctttacaaaatggaaggagaagaactgcagccatgaagtgacagtggttcta
ttttctagaacattttacgaagcaaaatctatagatgagtttcctgaaacacatcgtgca
tcaattcggcaggatcatgagggaagattttatgaagatttttacaaagttgtagtgcag
aatgagagacgagaagagtggacttcattgcttgtgaccattaaaaagcttttcatccag
tatcctgtgttggtacgactagaacaagcagagggctttcctccaggtgacaattctacc
tcggcacaagggaactacctggaggccataaatctttcattcaatgtgtttgacaagcat
tacataaacaggaactttgatcggactggccagatgtctgtggttatcacacctggtgtg
ggtgtatttgaagttgatcgactccttatgattctaaccaaacagcggatgatagacaat
gggataggtgtggacttggtatgcatgggagaacaaccattgcatgctgtaccactcttt
aagctccataatcgctgtggacctggtgactccagactgggtgatgactacaatattcca
cactggataaaccatagtttctacacatccaaaagccagctcctgtgtaacagcttcact
ccacggatcaagctggcaggaaggaaaccactgactgagaaagcaaaaaataaccgagat
gcctcgttaggggctccaaaagatgctgagaatgccctgcctatccaggtagattatgac
ggctatgatgcccaggtgttcagactcccaggcccctccagagcccagcgctgtaccact
ttcagcaggtctgtgagggagagagaaagtcgtaccagaaagagctctagttcctatgac
gtctcatgcagcccttctctgcagagccgcacgctgcctccagaagaggtgaggagccag
gcttctgacgacagctcactgggcaagatctccaacatcctgatgatcccacggcctcac
ctgcatcagtgtgaagtcagcagctctttgggctataccagcaccagagatgtccttgag
aacatgctggagtctcagcaacgtgactccagtgcccctgggaggttccatgttggcagt
gcagaatccatgctgcacattcggcctgggggatatacaccccagcgagcactgataaac
ccgtttgccccatcccgcatgcccatgaaacttacatctaacaggaggcgctggatgcac
acttttcctgtgggtccatcaggagaagctatccagatccatcatcaaacccgtcagaat
atggcagaaatgcaaggcaatgggcagcaggatttgacacattcctctgctgagctgctg
gagctggcttaccatgaggcaactggcagacatatcagctctcggcatccaggtgacagt
gtctctttcctgagcttcagcggaacagaagagtactctaatggtctggctggcagcaat
ggtgcagggatgaacctcaaaactcagaacaaggattccttggaagatgctgtctctaac
tctccggatccaattctgacgctgtctgctccccccgtagtgccaggcttctgttgtaca
gttggagtggactggaaatctctcactactccggcatgtctccctcttaccacggactac
ttccccgaccgtcagagtctgcagaacgattacactgagggttgctatgatctcctccca
gaagctgacattgacaggagagatgaggaaggagtgcagatgacagcccaacaggtgttt
gaagagtttatttgtcagcgtctcatgcaaggctatcaaattattgtgcaatccaaacca
cagaaaccagccacaactgtgccacccccactcagcagcagtcccctttacagtcgaggt
cttgtatcaagaaatcgacctgaggaagaagatcagtactggctgagtatgggccgtact
ttccacaaagtaacattaaaagacaaaataattacggtgactcgatacctgccaaagtat
ccatatgaatctgctcagataaactacacttacagcttgtgcccctcacactctgactct
gaatttgtctcttgctgggtagaattttcccatgagagactagaagagtacaagtggaat
tacttggatcagtatatctgctctgctggctctgaggatttcagccttattgaatcactg
aaattttggaggacccgctttctgcttctgcctgcctgcatcagtgccacaaagcgcatt
atggaaggagaggtgcactgcgatgtgtacggtgacaagccccgttctgatgaggaggag
tggcagctcctggatggattcattcgctttgtggagggtttgaaccgcattcgtcgacgc
catcggtctgatcgaatgattcgaaaagggtctgccatgaaaggcttgcagattgctggt
ccaattcccacccactctctggagcagtctgggcctcccattgggaagaaaggaacctca
gcactctcagctctgctgcagatggaagccagtcagaagacactgggggagcagcaagca
gcaatgctttctgggaagagctctgggcagccttcggagagtgggagcattgccatcaca
cccacctatatggacagccctcgtaaggatggggccttctttatggattttgttcgcagc
ccacgtacagcttcaaccttctactcacaggtctctatagatcaatcagttcctgcaacc
tcagatggcaacacattgataaacacggggcagttacctgataggggcaacatgcagacc
ttgggaagttcccagagtgttgcagaccaaggatacaccacagctggtgctgcagagggc
agctctcagcagtgttcaacaagcactctgacttcctcctccaccttgatagagattctc
gaagccatgaaacaccccaccacagggatccagctgctctctgaacagaagggcctctct
ccgtactgtttcatcagtgcagaagttgtacactggctggtgaataatgtggaaggtgtg
caaacccaagccatggcaattgacataatgcagaaaatgctagaagagcagcttattgtc
cacgcatctggagaagctttacgaacttttatttatggcttttatttttacaagatggtt
gtggacaaagaaccagaccgagtgggcatgcagcagcctgctatgtggcacacagctgct
atggatgacttctccgccttccaaaggaaatggtttgaggtggcgtttgtggcagaagag
ctcctgcactcggaaatcccagcgtttttcctaccctggctgcccagccgcccagcctcc
tatgcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagctgca
ctattagctgctacagtgcctgagcaacggacagtgacgcttgatgtggatgtgaataac
cgcactgaccgtttggagtggtgcagttgttattaccatggcaatttctccctgaatgct
gcctttgaaatcaagttacactggatggcagtgaccgcagctgttctttttgagatggtt
cagggttggcatcggaaagccacatcctgtggtttcttgctagttccagtcttggaaggc
ccatttgcgttgcccagttacttatacggagacccacttcgagctcagttgttcatccca
ctcaatgttagctgcttgttgaaggagggtagtgagcatttgtttgatggcttcgaacca
gaaacatactgggaccgtatgcatctcctccaggaagcaatagcatacagatttggattt
gtgcaagataaatactcggcctctgcattcaacttcccggctgagaacaagccccagtat
atccatgtcacagggacagtgtttttgcagctaccgtattccaagcggaaattttcttgt
gggcagcagcgacgccggcgcaactccactagctccaccaaccagaacatgttctgtgaa
gagcgcattggctacaactgggcctacaacaccatgctgacgaaaacgtggcggtccagt
gccaccggggatgagaagtttgctgatcggttgctgaaagactttacagacttttgctgg
aacaaagatagccgtcttgttttgttctggactgattgtctggataagatgcatgctagt
gctccatga
DBGET
integrated database retrieval system
