Calonectris borealis (Cory's shearwater): 142090126
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Entry
142090126 CDS
T11211
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142090126 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142090126 (UBE3B)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
142090126 (UBE3B)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
HECT type E3
142090126 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
142090126
NCBI-ProteinID:
XP_075023630
LinkDB
All DBs
Position
18:complement(6924289..6948002)
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AA seq
1070 aa
AA seq
DB search
MFSASQSSKAQFLDKARQAREERRELKERERAAVQIQALIRRFLCRCRLQREIRREVEDF
FGANESGSSKRSALSIFRIARKLLFVFNHKEDKERFEKLCRCILNSMDVENEPKVWYVSL
ALCKDLTLLWIKQIKDILWFCCEFLKQLKPDILQDSRLVNLHLTMLVTFTDTSTWKILRG
KGETLRPAMNHICANIMGHLNQKGFFSVLQILLTNGLARSRPSLSKGSLTAVFSLALRPV
VAAQFSDNLLRSFLIHIMSVPAIMTHLATLTPERLAVIESHDLFRKFILFLSCEAQCRDV
CVCLEGSHTLCLLGNLVYLGSLNDKVLEEETAHFVGVLIHMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGLNESMPLLTKQLQHLWGVHMIRILFSDVLSKKLLENQEIAQLPTQPV
SPQNSLPMKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTTLTTLTQIR
LQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAMLMLFCDCSRH
LITILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENARGETLELFHSVHGWL
MVLYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDKKRAQLLLQYIPHVIPHKNRVLLFR
NMVTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQNAMKGVIRVKFVNDL
GVDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFV
GKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDG
DISDLGLTLSYDEDVMGQLVCHELVPGGKTIPVTNENKISYIHLMAHFRMHTQIKSQTAA
LISGFRSIIKPEWIRMFSAPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWD
ILANDFSPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGF
FTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgcgagccagtcctccaaagcccagttcctcgacaaagcgcgccaggctcgg
gaggagcggagggagctgaaggagagggagcgtgctgccgtccagatccaggctctgatc
agaagatttctctgtcggtgccgcctgcagagggagataaggagagaagtggaggatttc
tttggggcaaatgaatctggctcaagtaaaagaagtgctctttctatcttcagaattgcg
aggaaactgctgtttgtatttaatcataaagaggacaaagagagatttgaaaagctgtgc
cgttgtattctgaatagtatggatgttgagaatgagcccaaggtgtggtatgtgtcactg
gcactctgcaaggatcttacactcttatggatcaaacagatcaaagacattttgtggttt
tgctgtgaatttctcaagcagcttaagcctgacatcttacaagactccagactggtcaat
ttgcacctcacaatgcttgtcaccttcacagacacttctacgtggaaaatccttcgggga
aaaggtgaaaccctgaggcctgccatgaaccacatctgtgcaaacatcatgggacatcta
aatcagaagggatttttttctgtgctgcagattttgctaactaatggcttggcaagatcc
agaccttccttgtccaaaggctctttaactgccgtcttctctcttgcattgcgccctgtg
gttgctgcgcagttttcagacaatctgttgaggtcatttctgatccatatcatgtctgtg
cctgctataatgactcatcttgctactctaacacctgagcgtctggcagtgatagaatct
catgatcttttccgcaagttcatcctatttttaagttgtgaagcacaatgtcgagatgtc
tgcgtatgcctagaaggaagtcacactctttgtttgttgggtaatcttgtgtacttgggc
tccttgaatgacaaagttcttgaggaggagacagctcattttgtgggtgtgcttattcac
atgctctcctactgccagaagtacgtttcacaaaagaaatccaacctcacccactggcat
cctgttcttggctggttttcacagactgtggattatggattgaatgagtccatgcctctg
ctgacaaagcaactgcagcatctctggggagtccatatgatccgcatcctcttcagtgat
gtgctcagcaagaaattgctggagaatcaggaaatagctcagctgccgacacagccagtt
tcccctcagaacagccttcctatgaagaatcttttcaagagagctttccagaagtctgca
tctgtccgcaacattctcaagcctgttgggggcaagcgagtggactcagcagaagtacag
aaggtgtgcagtatctgtgtcctgtaccaaaccacgctcacaacgctgacgcagatccgc
ctgcagatactcacaggcctcacttacctggatgatctgttgcccaaattatgggctttt
atctgtgagctgggaccacagggcgggttaaaactcttcttggagtgcttgaataatgat
acggaggaatccaagaggctgctggccatgttgatgctcttctgtgactgctcccgccac
cttatcacgattcttgatgacatagaagtttatgaagagcagatttcattcaaactggaa
gagcttgttaccatctcgtcttttctgaattcctttgtatttaagatgatctgggatgga
attgtagagaacgccagaggggagaccctggagctgtttcattctgtccatggctggctc
atggtcttatatgaaagggactgccgcaggcgttttgctcctgaggatcactggttacgc
aaggacctcaaacccagcgtgctcttccaggagctggacaaggacaagaaacgagcccag
ctgctcctgcagtacatcccgcacgtcattccccacaagaatagggtgctgcttttccga
aatatggttacaaaggagaaagagaagcttgggctggttgaaaccagctccgcatcacct
catgtcacacacatcactatccgccgctcacgtatgctggaggatggatatgaacagcta
cggcagctttcccaaaatgccatgaagggagtgatcagagtgaagtttgtgaatgatctg
ggtgtcgatgaggctggtattgatcaagatggtgtcttcaaagagtttctggaagagata
ataaagaaggtgtttgaccctgcactcaacttgttcaagacaaccagtggtgatgagagg
ctgtatccatccccaacatcctacattcatgagaactacctacagctctttgagtttgtg
gggaagatgcttgggaaggctgtatatgagggaatagttgtggatgtaccgtttgcttcc
ttctttttgagtcagctacttgggcaccaccacagtgtcttctacagctccgtagatgaa
cttccctccttggactccgagttctataaaaatctcacttcaattaagcgttatgatggt
gatatcagtgacttgggcttaacgctgtcctacgatgaagatgtgatgggtcagcttgtt
tgccatgaacttgttcctggagggaagaccattcctgttaccaatgaaaataagatcagc
tacatccatctcatggctcacttccgcatgcacacgcaaatcaagagtcagacagcagca
ctcatcagtggattcaggtcgatcattaagcctgagtggattcgtatgttttctgcacca
gagttgcagcggctgatctccggtgacaatgctgagattgacctcgaggacttaaaaaaa
cacacggtgtactatgggggcttccatgggagccaccgggtcattatctggctctgggac
atcctagccaatgacttcagccctgaggagagagccatgtttctcaagtttgttaccagc
tgctccaggcctccacttttgggctttgcctacctcaagcctcctttttccatccgctgt
gtggaagtctctgatgatcaggacaccggtgacacgctgggcagcgtgcttcggggcttc
ttcacaatccgcaagaaagagccaggcgggcgtctcccaacctcctctacgtgtttcaac
ctcctcaagcttcccaactacagcaagaagagcatcctgcgggagaagctgcgctacgcg
atcagcatgaacactggcttcgagctgtcctag
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