Calonectris borealis (Cory's shearwater): 142090372
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Entry
142090372 CDS
T11211
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03030
DNA replication
cbor03410
Base excision repair
cbor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142090372 (POLE)
03410 Base excision repair
142090372 (POLE)
03420 Nucleotide excision repair
142090372 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbor03032
]
142090372 (POLE)
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142090372 (POLE)
Enzymes [BR:
cbor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
142090372 (POLE)
DNA replication proteins [BR:
cbor03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
142090372 (POLE)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
142090372 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
142090372
NCBI-ProteinID:
XP_075024253
LinkDB
All DBs
Position
18:complement(308256..338894)
Genome browser
AA seq
2311 aa
AA seq
DB search
MVLRGGGRRAEPGGGGGGDPEGARWGRRAGGPREPAAGADGAASGRDDGPALSALKRLER
SQRTDRLDALFGFERPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVA
LPYKPYFYIATQKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSF
NTVDDLVKVRKEISPAVRKNRERDQASDVYTAMLSSALSGGSLSTDEEGASRKVANQMDN
IVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTYPPEITRRDDLVERPDPVVLAFDIE
TTKLPLKFPDAEVDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNE
PDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAVHGINMYQEIGFQKDSQGEY
KASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLAT
YSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFP
NKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKT
LRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILT
NRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPP
LSPEGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDT
VRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYG
YVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFV
IKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENSIFFEVDGPY
LAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGS
TLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTA
KRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSP
SLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDV
YKQKKINELFTSEGKRQVLTSQRPEGMPSSQIGDIEDFGAAKTLQPPVPIANKRKRVPAA
EESQQMSQYLELSQSWREILGPPPPLGTTKEERLVWLRYHQKKWELQARQRREQRKRRRL
EDGGVTASGGVVRDALSKGLSSYLRRTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDL
HCIKLSIPRVFYVNQRVLKPEEGAAYRRVNRILPRSNLVYNLYEYSVPEDMYQEHINEIN
ADLSAPDIEGVYETQVPLLLRALIHLGCVCMVSRQLVRHLAGREAETFDIEHLEMRSLAQ
FTYLEPGSIRHIYLYHSSQGSKAVLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSAERS
ALLEKAGEELLPPDKHTFEVRAETDPKAVYRAIQRLLLGYKDERRGPTLVAVQSNWDLKR
LASGIPIIEEFPLVPIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHI
PIGNLPDDISTFGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVE
INNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGGSSMSISFDVIQQASLEDMVTGNQA
ANIPASYDETALCSNTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDP
ALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIISSIH
SKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKVDSRIHYGEKDTSKRQVLGEEDSEEEE
EEAAAGEEEEEEGEPNVEELLENSWNIAQFLPQAASCQSYFLMIVSAYIVAVYHSMKEEL
RRNAPGSTPVKRRSTSQVSQEALGEMGAMPGMITFSQDYVANELTQSFFTITQKIQKKVA
GSRNATEPSDLFPVLPGSYLQLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEV
GEFSEAAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSVLPSWVCSNCQAQYD
SNAIETALVEALQKKMMAFVLQDLVCKKCHGVKETHMPVYCSCAGDFALTISSQTFMEHV
NIFQNIARHYGMAYLLETIEWLLRTNPKLRQ
NT seq
6936 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcggggcggcgggcggcgcgccgagccaggcggcggcggcggcggagacccc
gagggagcgcggtgggggcggcgggcgggcggaccccgggagccggcggcgggagctgac
ggcgcggcgtctggcagggacgatggccccgcgctgtccgctctcaagcgcctggagcga
tcgcagcgcacggaccggttggatgcgctgttcggctttgagcggccagcggagcccggc
gagcggacgggctggctcatcaacatgcacccgacggaggtgctggacgaggaccggcgg
tcggtgagcgctgtggactactacttcatccaggaggatgggagccgcttcaaggtggcc
ctgccctacaagccctacttctacattgccacccagaagggctgtgagcgagaagtgtcc
tccttcctctccaagaagttccaagggaagattgcaaagctggaaactgtccccaaagaa
gacttggacctgccaaaccacttggtgggcctgaagaggaattacatcaagctgtccttc
aacacggtggatgacttggtgaaggtgcggaaggagatctctcctgcggtgaggaaaaac
agagagcgagaccaggcgagcgatgtctacacggccatgctgtcgagtgctctgagcgga
ggcagcctgagcacggatgaggaaggggcctccaggaaggttgccaaccagatggacaac
attgtggatatgcgggaatacgacgtaccctaccacgttcgcctctccattgacctgaag
atccacgtggctcactggtacaacgtgcgataccggggcagcacctacccccccgaaatc
acccgccgagacgaccttgtggagcgaccggatcctgtcgttctcgcctttgacattgaa
actaccaaactccctttgaagtttcctgatgcagaggtagaccagattatgatgatctcc
tacatgattgatgggcagggctacctgatcacaaacagggagatcgtctctgaggatatt
gaagactttgagtttactcccaagccagagtatgagggtccattttgtgtctttaatgaa
ccggatgaagctcatttaatccagaggtggtttgaacatgtgcaggagaccaaacccacc
atcattgtcacatacaatggagacttctttgactggccctttgtggaagcaagagcagca
gttcatggaattaatatgtatcaggaaattgggtttcagaaggacagccagggagagtac
aaagcatcccagtgcatccacatggactgtttaaggtgggtgaagagagacagttacctc
ccagtgggaagtcacaacctgaaagcagcagctaaagcaaaactgggttacgatccagtg
gagctggaccctgaagagatgtgccggatggctaccgaggagcctcagaccctggccacc
tattcagtgtctgatgcagttgctacctattacatgtatatgaagtacgtgcatcctttc
attttcgccttgtgcaccatcattcccatggagcctgatgaggtgttaagaaaaggatct
gggacactgtgcgaggcactgctaatggttcaggcctatcacgccaatatcatcttcccc
aacaagcaggagcaggaattcaacaaacttacagaagatggccacgtgctggactcggag
acgtacgtgggaggccacgtggaagcactggaatctggggtcttccgcagtgacatcccc
tgccgcttcaaaatgaaccctgctgccttcgacttcctggtgcagcacgtggagaagacg
ctgcggcacgccatcgaggaggaggagggtttgccattggatcaagtcaccaacttccag
gaggtttgcgatgaaatcaaagtcaaactgaattccctgaaggatgttccgaacagaatt
gagtgtccccttatctaccatctagacgtgggggccatgtaccccaacatcattctgacc
aacaggttgcagccctcagccatggtggatgaggccacatgtgctgcctgtgacttcaac
aagccgggtgccaactgtcagcgccggatgacttggcagtggagaggagagttcatgcct
gccagccgcagtgagtatcaccgcatccagcagcagctggagtcggagaagttccctccc
ctgtcccccgagggagcaccccgcgccttccacgagctctcccgggaagaacaggccaag
tacgagaaaaagcggctggcagattactgccgcaaggcatacaagaagatccatgtcacc
aaggtggaggaacgagtcaccaccatctgccagcgagaaaactctttctatgtggacacg
gtgcgagctttcagggaccgccgctatgagttcaaggggctgcacaaggtgtggaagaag
aagctgtctgcagcggtggagacaggagatgcctctgaagtgaagcgctgcaagaacatg
gaaatcctgtatgactccctgcagctggcccacaagtgcatcctcaactctttctatggc
tacgtcatgcggaaaggagctcgctggtactccatggaaatggctggcatcgtctgcttc
acgggagcgaatatcatcacccaggccagggaactgatcgagcagattgggagacctctg
gaactggataccgatgggatttggtgtgtcctccccaacagcttcccggagaactttgtc
atcaagtcaaccaatgccaagaagccgaaggtgacaatctcctacccaggtgccatgctg
aacatcctggtgaaggaaggcttcacaaatgatcagtaccaggaactgcaggacccagcc
tctctcacttacgtcacgcgctcggagaacagcatcttttttgaagtggatggaccatac
ctggccatgatcctcccagcttccaaggaggagggcaagaagctgaagaaaaggtacgca
gtattcaatgaggacgggtccctggccgagctgaagggatttgaggtgaagcgccgggga
gagctgcagctggtgaagatattccagtcttctgtatttgaagcctttctgaaaggcagc
accctggaggaggtctatgcttctgtggccaaggtggccgattactggctggatgtgctc
tacagcaaggctgccaacatgcctgattcagagctgtttgagctaatctcggagaaccga
tccatgtcgcgcaagctggaggactatggggagcagaagtccacctccatcagcactgcc
aagcgcctggcagagttcttgggggaccagatggtgaaggatgcagggctgagctgccgg
ttcatcatttccaagaaaccagaagggtctccagtcaccgagagggccatcccccttgcc
atcttccaagccgagcccagtgtgcgcaaacactacctccgaaaatggctgaagagcccc
tcgctgcaggacttcaacatccgcgcgatcctggactgggactactacatcgagagactg
ggcagcactatccagaaaatcatcaccattcccgcagccctgcagcaggtaaagaacccg
gtgccacgggtccggcacccagactggctccacaagaaactcctggagaagaacgatgtg
tacaaacagaaaaaaatcaatgagctcttcacttcagaaggcaagagacaggtcctcacc
agccagcgcccagaggggatgcccagctcacagattggtgacatagaggactttggggct
gccaagacccttcagccaccagttcccattgcaaataagcggaagcgagtccctgcagca
gaggaaagccaacagatgtcccagtacctggagctatcccagtcctggcgagagatcctg
ggtccacctccgcccctgggcaccaccaaggaagagcggctggtctggctgcgctaccac
cagaagaagtgggagctgcaggctcggcagcggcgggagcagcggaagaggcggcgtctg
gaggatggtggggtgacagcaagcggaggagtggtccgcgatgccctctccaaagggctg
agcagctacctgcgcaggacggcacgcagcatcctggacttgccctggcagatcgtgcag
atcgccgagaccagccagcctgggctgttcaggctgtgggcggtgatcgggagtgacctg
cactgcatcaagctgagcatcccccgggtcttctacgtcaaccagcgtgtcctgaagccg
gaggagggagcagcctacaggagggtgaacaggatcctgccccgctcaaacttagtttac
aacctgtatgaatactccgttcctgaagacatgtaccaagagcacatcaatgaaatcaat
gcggatctctctgctccagacatcgagggagtgtatgagacgcaggtgccgctccttctc
cgtgccctgatccacctgggctgcgtgtgcatggtcagcaggcaactcgtcaggcacctg
gcagggcgagaggccgaaacctttgacatcgagcacctggagatgcgctcgctggcccag
ttcacttacctggagccaggaagtattcgccacatctacctctaccacagctcccagggc
agcaaggcagtcttgggcctcttcatcccctcgcagcgcaaagctgccgtctttgtgctg
gacaaggtacgcagcaaccagatgccgaatctcaccaccctcttctcagcggagcgcagc
gcgctgctggaaaaggcgggcgaagagctgctgcccccagacaagcacaccttcgaagtg
cgcgccgagaccgaccccaaggccgtctacagagccatccagcggctgctgctgggctac
aaggacgagcgccggggccccacgctggtcgctgtgcagtctaactgggacctgaaacgg
cttgcaagcgggatccctatcatcgaggagttccccttggtccccatccggctggtagat
gacatcagctactcggtcctggactggcagcgccatgccgcccgccgcatgatccgccac
tacctcaacctggacacctgcctctcgcaggctttcgagatgagcaggtactaccacatc
cccattgggaacctcccggatgacatctccaccttcggctctgacctgttcttctcacgc
cacctccgtcgtcacaaccacttgctgtggctctcgcccacggcccgcccagacctgggg
ggtaaggaggctgatgacaaccgcctagtcatggagttcgatgagagagcctccgtggag
ataaacaaccctggctgctactccacagtgtgtctggaactggacatccagagcctggct
gtaaacacggtgttgcagtcccaccacataaacgacatggaaggaggctccagcatgagt
atcagctttgacgtgattcagcaggcatccctagaagacatggtgacagggaaccaagct
gccaacatcccagccagctatgacgaaactgccctctgctccaacactttcaggatcctg
aagagcatggtggtgagctgggtgaaggagatcacccagtatcacaatgtctacgcagac
aaccaggtcattcacttttaccgctggctccgctctccttcctccctgctctacgacccg
gcactgcaccgcactctccacaacatgatgaagaagcttttcctccagctggtggctgag
ttcaagcgtctgggctcctcggtggtttatgccaactttaaccggatcattctgtgcacc
aagaagcgacgcatcgaggacgccatcagctacatggagtacatcatcagcagcatccac
tccaaggagatcttccactctctgaccatctccttctcccgctgctgggagttcctgctc
tggatggatccagcaaattatggaggtatcaagggaaaagtggattctcgcatccactac
ggggagaaagacactagcaagaggcaagtgttgggggaggaggacagcgaggaagaggag
gaggaggcagcggcgggggaagaagaggaggaggaaggggagccaaatgtggaggagctg
ctggagaacagctggaacatcgcgcagttcctgccccaggctgcctcctgccagagctac
ttcctgatgatcgtgtcagcctacattgtggccgtgtaccacagcatgaaggaggagctg
cggcgcaatgcccctgggagcacccccgtcaagaggaggagcaccagccaggtgtcccag
gaggcgctgggggagatgggggccatgcccggcatgatcaccttctcacaggattacgta
gccaatgagctcacccagagcttcttcaccatcacccagaagatccagaagaaggtggct
ggttctcgtaatgccactgagccttcagacctgttcccagtgctgcctggctcctacttg
cagctcaataacccagctctggagttcatcaaatacgtttgcaaggtcctctccctggat
gccaacataaccaaccaggtgaacaaactgcgccgggacctgctgcgcctcatcgaggtg
ggcgagttctcagaagcagcccagtttcgggacccttgccgctcctatgtgctccctgaa
gtcatctgcaggaactgcaacttctgcagggacctggacctgtgcaaggaccctgccctc
tcccaggatgggtcagtgctgcccagctgggtctgctccaactgccaggcacagtacgac
tctaatgccattgaaacagcgctggtggaagccctgcagaagaaaatgatggcctttgtg
ctgcaggacctggtgtgcaagaagtgtcatggcgtgaaggagacgcacatgcctgtgtac
tgcagctgtgctggagactttgccctcaccatctcctcccagaccttcatggagcatgtc
aacatcttccagaacatcgcccggcactatggcatggcctacctgctggaaaccatcgag
tggctgctgcgcaccaaccccaagctccggcaatga
DBGET
integrated database retrieval system
