Calonectris borealis (Cory's shearwater): 142090487
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Entry
142090487 CDS
T11211
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04142
Lysosome
cbor04144
Endocytosis
cbor05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142090487 (CLTC)
04142 Lysosome
142090487 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
142090487 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142090487 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142090487 (CLTC)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
142090487 (CLTC)
Exosome [BR:
cbor04147
]
Exosomal proteins
Proteins found in most exosomes
142090487 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
142090487
NCBI-ProteinID:
XP_075024551
LinkDB
All DBs
Position
19:complement(3963128..3997072)
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgccgattcgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcata
agagagaaagtaggggaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
cctattcgaagaccgatttcagctgacagcgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcatacaatgacagatgatgttaccttttggaagtggatctctctgaatactgttgcc
cttgtaacggataatgcagtctaccactggagtatggagggggagtcccagcctgtgaaa
atgtttgatcgccattccagtcttgctggctgccagatcatcaactaccgtactgatgct
aagcagaaatggctactgctaactggcatatctgcacagcaaaatcgtgttgtgggagca
atgcagctatattctgtagatagaaaagtgtcacaaccaattgagggacatgcggctagc
tttgcgcagttcaagatggaaggaaatgctgaagaatccactcttttttgttttgctgta
agagggcaagctgggggtaagttgcatatcatcgaagttggcacaccacctactgggaat
cagccatttccaaagaaagcagtggatgtcttctttcctcctgaagcacaaaacgacttt
cctgttgccatgcagatcagtgacaagcacgatgtggtgtttctcataacaaaatatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtggg
gagaccatatttgttactgcacagcatgaagcaacagctggaattattggagtaaacaga
aagggacaagtgctctcagtgtgtgtggaagaagagaatattattccctatatcacaaat
gtgctgcagaatcctgacctagctttacgaatggctgtccgcaacaacctggcaggtgct
gaggaactctttgccagaaaattcaatgcactgtttgcacaagggaactattcagaagca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccgggacagacttcccctttactccagtactttggcatt
ctgcttgaccaagggcagctgaataagtacgagtcactggaactctgcagaccagtgctt
cagcagggacgcaaacagcttttggaaaaatggttaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagatcctacgctagcacttagtgtctatctg
agagccaacgttccaaacaaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtggatgtctttatggaatataatttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccttcagaaggtcccttg
caaacacgtttacttgagatgaacctcatgcacgcacctcaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgaccgtgctcacatagctcagctgtgtgagaaagct
ggcttgctacagagagcgcttgaacacttcacagacttgtatgacataaagcgtgcggta
gttcacactcatcttctcaatcctgagtggttagtgaattattttggttccttatcggta
gaagactctctggagtgtctgcgtgctatgttgtctgctaacattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccatgaacagctgtcaacacagtcacttattgag
ctgtttgagtctttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagttgccactgatcattgtatgtgatcgc
tttgactttgtccacgacctggtgctgtacttgtatagaaataatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgtctgcctgttgttattgggggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtggtgagaggtcaattt
tcgactgatgaacttgttgcagaggttgagaaaagaaacaggctgaaactgcttctgccc
tggctggaagcaagaattcacgagggttgtgaggagcctgccactcacaatgcactggcc
aaaatatacattgatagcaacaacaacccagaaagattcctgcgtgagaatccttattat
gatagtcgcgtggttggcaagtactgtgagaagagggaccctcacctggcctgtgtggct
tatgagcgtggacagtgcgatttggaacttattaatgtgtgcaatgagaactccctcttc
aaaagtctttcccgctacttagttcgccgtaaagaccctgaactgtgggccagcgtacta
ctggaaagcaacccttacagaagaccgctcattgaccaggttgtacagactgcgctgtca
gagacacaggaccctgaggaagtctctgttactgtgaaggccttcatgactgcagatctt
cctaatgagcttattgaactgctggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctcattcttacagctattaaggctgatcgcacccgtgtc
atggaatacatcaatcgcctggataactacgatgctccagacatagccaatatagctatc
agcaacgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcgtatgaatttgctgaa
cgctgcaatgagcctgctgtatggagtcagctggctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgactcatatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaagtatctccaaatggca
cgcaagaaggcccgggagtcatatgtggaaacggaattaatctttgctcttgctaaaaca
aatcgtctagcagagctagaggagtttatcaatggacccaacaatgcacatatccagcaa
gttggcgatcgctgttatgatgaaaagatgtatgaagcagctaagctgttgtataacaat
gtgtccaacttcggccgtttagcctcgactttagttcacctaggtgaataccaggcagct
gtagatggtgctcggaaagcaaacagtactcgcacgtggaaagaggtctgcttcgcctgt
gtggatggaaaagagttccgcctggcccagatgtgtggactccatattgtagtgcatgca
gatgagttggaagagctaattaactattaccaggatcgtggctacttcgaagagctgata
actatgttggaagcagcacttggacttgagcgagcacacatggggatgtttacagagcta
gcaattctctactccaaattcaagccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaagcccatctctgggctgaa
ctggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaat
gtggagctgtattacaaggcagttcaattctatttggaatttaaacctctgttgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctaccactggttaagccttacttgcgctctgttcaaaatcacaacaac
aaatcggtgaacgagtctctgaacaacctcttcattattgaagaagactaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacatgaactaatagagttccgaagaattgctgcgtatctcttcaaaggaaacaatcgc
tggaaacagagtgtagaactctgtaagaaagacagactgtataaggatgcaatgcagtat
gcttcagaatccaaagatactgagttggcagaagagttgttgcagtggttcttgcaggag
aacaagagagaatgctttggtgcgtgtctcttcacctgctatgatctcctgaggccagat
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggtggataaactggatgcatcagagtctttgaga
aaggaagaggagcaagctacagaaacacaacctattgtttatggtcagccacagctaatg
ttgacagcaggacccagtgtcgcagttcctccacaagcaccttttggctatggctacact
gcacctccatacgggcaaccgcagcctggctttgggtacagcatgtaa
DBGET
integrated database retrieval system
