Calonectris borealis (Cory's shearwater): 142090551
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Entry
142090551 CDS
T11211
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
142090551 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142090551 (SLC6A4)
Transporters [BR:
cbor02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
142090551 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
142090551
NCBI-ProteinID:
XP_075024728
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Position
19:5407133..5432124
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AA seq
670 aa
AA seq
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MEKKTTSNETEPLTSKKDVSDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
VAQISNGYSGVQSSVPCNGMGEVEDAQCNAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTAELPWTSC
TNAWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRHVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRHEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFDYNYPHWTAVVGYCIGTSSIICIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagacaacaagcaatgagactgagccgctgacttccaagaaagatgtctca
gactgtaatgaaggagaagattgtaaagagaacggacttctggtcaggaaccctaaatct
gccctacggctagtggaggatggcaataaagtccatcccagccagggagataaaggggag
gtagctcagatctcaaatggttattcaggggttcagagctctgttccctgcaatggaatg
ggagaggtggaagatgcccagtgcaatgccccagcagccacaaccaccactacaaccacc
acttctaccacctgcggagcagaaggacagcagcagctgatggagctagaagacagagag
acctggagtaaaaaaattgactttctactctctgtcattggatatgcagtggatctggga
aatgtgtggagatttccttatatatgctatcaaaacggaggaggagcattcctcattcct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctactacaacacgattatg
gcttgggccttttactacctcgtatcctccttcacggcggagctgccatggactagctgc
acaaatgcttggaacacaggcaactgcactaactacttcagcaaggacaatgtcagctgg
tccctgcactccatctctcccgcagaagaattttatacccgccacgttctacaggtgcac
aggtccaatgggctggatgacctggggggcattagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtatgggtgactgccacattcccttacatcatactctttatcctgctcgtgagaggtgca
actttgcctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctcccttggtccaggt
tttggggtcctattggcttatgccagctacaacaaattccataacaattgctaccaagat
gctctggttaccagtaccgtgaactgtgtgactagttttgtgtctggattcgtcatcttc
actgtgctgggatacatggctgagatgaggcatgaggatgtgtcagaggttgccaaagat
actggacccagccttctcttcattacgtatgctgaggccattgcaaatatgcccgcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgattactggagtactcgatgaattcccgcatgtctggagcaaa
cgcagggaattgtttgtccttggtctgaccatcgtttgctttttggggtcattagcaacc
ctgacatttggaggcgcgtatgtggtaaagctgtttgaagaatatgccactggtccagct
gtcctaacagttgtgtttctggaagcagttgctgttgcctggttctacggcatcacccag
ttttgcaacgacgtgaaagaaatgctaggctttaccccaggctggtactggcgagtttgc
tgggtagcaattagtcccatcttccttctgtttgtcacttgcagctttctctccaatcct
cctgagctacggctttttgattataattatccccactggaccgcagtagtgggttattgc
ataggaacctcttctatcatctgtattccaatctacatggtttatcggttgatcatcact
ccaggaacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaatgcagtataa
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