Calonectris borealis (Cory's shearwater): 142090571
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Entry
142090571 CDS
T11211
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142090571 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142090571 (SUPT6H)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
142090571 (SUPT6H)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
142090571 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
142090571
NCBI-ProteinID:
XP_075024786
LinkDB
All DBs
Position
19:complement(5978376..6008800)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFNAIAAVTGQGQNPNATPAQWANSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagcagaggagtcggaggaggagtacaaccaggatggg
gaggttgtgcccagagtaaccaaaaagtttgtagaggaagatgaagatgatgaggaagag
gaagaggagaatcttgatgatcaagatgagcaggggaatctgaaaggattcattaacgat
gacgatgatgaggaagaggaagaggaggaagaagccagtgactctggagactctgaggac
gacgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggcgttaaagtcaaaagacaaaaattcagacgtgtgcga
aaaatgtctgatgatgaggatgacgaagaggaagactatggaaaggaagaacatgagaag
gaagccattgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagctgtt
gaagctcctgttgctccaccagaagaggaagaggaggaggaggaagatgaatctgacatc
gatgacttcattgtggatgacgatggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggacttc
gactatgatgagtttgagaagtacaatgagtatgatgaggagatggaggaggaatatgag
tatgaggatgaagaggccgaaggggagacccgtgtacgacccaaaaagactgccaagaag
cgcgtcagtcggcgtagcatctttgagatgtacgagcccagtgagctggaaagcagtcac
ctaacggaccaggacaatgagatccgcatgacagacatgcccgagaggttccagttgcga
tccatcccggtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaacgcatttgcgacacccaccatctccttgcaggaaagttctgactacctcgaccgt
ggacaagccagcagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacagaaag
gagtatgtggagccagagctgcatatcaatgacctgtggagggtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcag
gcctatcagtacgaacaaatctctgctgacccagacaagcccttggctgatggaataagg
gccctggatactactgacatggagaggctgaaggacgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gccaaggctgctcgaaagaagcaaaaacgtatccgagaggatggtgaagaggaggaaggt
gaaggagaggatgcagaagatgatgagcagaaagggcctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaagaagtttggt
ctgacacctgagcagtttggagagaatctccgagacagttaccagcgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagc
cctgaagcagtgctggaaggagcccggtacatggtggctttgcagatagccagggagcct
ttggtcagacaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaaagggaagaaggatgttgatgaagcccactacgcctattcctttaagtacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagag
gaggaggcattgctgactatagatatcagcattgacatgaaaggagtggagggttatggt
agcgaccagacatactttgaggaaatcaaacagttctattatcgggatgagttcagccac
caggtgcaggagtggaatcggcagcgtacgatggccattgagcggtccctcaaccagttc
ctctacgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaggagtat
gtcctcaaggcttgcagccggaagctgtacaactggctaaaagtagcttcataccgtccc
gatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaaggggattcgg
gtgctaggcattgcattttcctcagccagggaccaccctgtgttttgcgcccttgttaat
ggagagggtgaggttacagacttcctccgattgccacatttcacaaagagaaggaacgcc
tggcgtgaggaagagagggaaaagaaggcccaggatattgaaaccttgaaaaaattcctc
ctgaacaagaagcctcatgtggtgacaattgcaggcgagaacagggatgctcaaatgctg
atggaggatgtaaagagaattgttcatgagctggatcaagggcagcagctgtcctctatc
ggagtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgag
aatgagttccgggattacccacctctgctgcgtcaagctgtctcccttgctcgccgcatt
caggaccccctcatagagttcgcccaggtctgcagctccgatgaggatattctctgccta
aaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgctctctactgc
gaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggcgattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacacgcgtctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcg
tcactgggcgacagtactgattcctacatcgaagtcctagatgggtctagggtccatcct
gaaacctatgaatgggcaagaaaaatggcagtggatgccttagaatacgatgagtcggcg
gaggacgctaatcccgcaggagctctagaggagatcttagaaaatcccgagcgcctgaaa
gacctggacctcgatgcctttgctgaagaactggaaagacagggctacggtgacaagcat
atcactttatatgacattcgagctgaactaagctgcaggtacaaggacctgagaacccca
taccgttctccaaacacagaagaggtcttcaacatgctgaccaaagaaactccagagact
ttttatataggtaaaatgatcatctgcaatgtgactgggatagcccacaggcgaccgcaa
ggagaaagctacgaccaggcaatacggaacgatgaaactggcctttggcagtgtcctttc
tgtcagcaggataactttccagagctcagtgaggtttggaaccactttgacagcggttcc
tgcccaggtcaggccattggagtgaagacacgtctggataatggtgtcgctggcttcatc
ccaacaaaatttcttagtgataaggtggtcaagcggccagaagaaagggtgaaggtggga
atgaccgttcactgcaggattatgaagatcgacattgagaagttcagtgcagacctgacc
tgcaggacctcggacctgatggataagaacaatgagtggaaactgcctaaagacacctac
tacgactttgactctgaggcagcagatcacaaacaggaagaagacctgaaaagaaagcag
cagcggacaacgtacatcaagagagtaattgctcacccatcattccacaacattagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggatgtgattattcggccaagt
agcaaaggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcat
gtggatgtccgagaagagggcaaggagaatgcgttcagcctgggctccacgctttggatt
aacacagaggagtttgaagacctggatgaaattgttgctcgctatgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactatcaggactgcaatggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacatttattccctac
tttattagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggc
aaaccaaggatagagtatgtgacagtgacgccagaaggattccgctaccggggccaggtc
ttccctaccgtgaacggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattacccccagcagtagcagtcggaccaggactcccgcctccattaatgctactccg
gctaacattaacctggcagacctgacccgtgcagtgaacgctctaccgcagaacatgacc
tcccagatgttcaatgccatcgccgctgtgacaggccagggacagaacccaaatgccacc
cctgcgcagtgggcaaacagtcagtacggctatggaggcagcggaggcggcagcagcgcg
taccacgtcttcacgactccagcacagcaaccggtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgattacaacgccccagtaccagctccaggccaac
accacaccccagtccacccagtcccagacacagtcgcagccatcgtccagctccaggcag
aggcagcagccaaagaccaacagccacgctgccatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgccca
tctcccagccccatgatcgagagcacgcccatgtccatcgctggggacgccacgccactg
ctggatgagatggatcgatag
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integrated database retrieval system
