Calonectris borealis (Cory's shearwater): 142090723
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Entry
142090723 CDS
T11211
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142090723 (TRIM50)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142090723 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
PRY
zf-C3HC4
TRIM_CC
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-RING_4
Sina_RING
U-box
Vps53_N
zf-ANAPC11
ATG17_like
Rotamase
CRLF3_N
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
142090723
NCBI-ProteinID:
XP_075025167
LinkDB
All DBs
Position
19
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AA seq
495 aa
AA seq
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MARRMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCPVCRQTV
DCSASPPNVTLARVIEALQSRGEAEPTPESCPTHHNPLSLFCEADQEVICGLCGTIGNHR
QHKITPISTAYCRMKEELSVLLTDVHQYKRNLDEHFSKLINNKSRIANEADVFKWVIRKE
FQELHRYIDEEKATFLESIEGKAAQLITSIESQVKQTSDTLQRLKEMQSSLEALSNESQL
DFIRKYGSSQFRSELPSLHPGDGIFIPVSFKPCFHQDDIKMTVWKRLHRRVLPAPETLKL
DPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFDSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKIYEAFSTPRATLPLTARPQRIGIYLH
YEKGELTFYNADNPDELSPIYTFQAEFQGQLYPIVDLCWPERGPYSPAIILPAPTASRHS
RAPYNHPAPEEPTKP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaggatgagcatcgacgagctggaggaccagctcctctgtcccatctgcttg
gaggtcttcaaggagcccctgatgctgcagtgtgggcattcgtactgcaagtcctgcgtg
gtgtcactctccggagagctggacgggcagttcctgtgccccgtgtgccgccaaaccgtg
gactgcagcgcctcgccacccaacgtcacgctggcccgtgtcattgaggcgctgcagagc
cggggtgaggcagagcccaccccagagtcctgcccaacacaccacaaccccctcagcctc
ttctgcgaggccgaccaagaggtgatctgtgggctgtgcggcaccatcggcaaccaccgc
cagcacaagatcacccccatctctaccgcgtactgccggatgaaggaggagctgtctgtg
ctgctgaccgatgtccaccagtacaagaggaacctggatgaacacttcagcaagctcatc
aacaacaaaagccgcatcgcaaacgaggcagatgtcttcaagtgggtgatccggaaggag
ttccaggagctgcacaggtacatcgacgaggagaaggccaccttcctggagagcatagag
gggaaggcagcccagctcatcacctccattgagtcccaggtcaagcagacatcagacacc
ctgcagagactgaaggagatgcagagctctctggaggcactcagcaatgaaagccagctt
gatttcatccggaaatacggctcctcccagttcaggtcagagctccccagcctgcacccc
ggcgatggcatctttatccccgtgtccttcaagccgtgtttccaccaagacgacatcaag
atgactgtgtggaagcgcctgcaccgccgcgtcctgccagctccagagacgctgaagctg
gacccagtgacagcgcatcccctcctggagctcttcaagggtgacacggtggtgcagtgt
gggctttaccagcgccgcgacagcaaccccaagcgttttgactccagcaactgcatcctc
acctgcaagggcttctcctgcggccagcactactgggaggtgattgtgggcaccaggaac
cactggcgcgtgggcatcatcaagggcacagtgagccgcaaagggaagctcagcaagtct
cccgagaacggcgtgtggcttatcggcctgaaggaagggaagatctacgaggccttcagc
accccgcgggccaccctgccgctgaccgcccggccccagcgcattggcatctacctgcac
tatgagaagggcgagctgaccttctacaatgccgacaaccccgacgagctcagccccatc
tacaccttccaagcggagttccagggccagctctaccccatcgtggacctgtgctggccg
gagcgagggccctactcccctgccatcatcctgcccgcacccaccgcgagccggcactcc
cgggcgccgtacaaccatcctgccccagaggaacccacgaagccgtag
DBGET
integrated database retrieval system
