Calonectris borealis (Cory's shearwater): 142090911
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Entry
142090911 CDS
T11211
Name
(RefSeq) ATP-binding cassette sub-family A member 10-like
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
142090911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142090911
Transporters [BR:
cbor02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
142090911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
142090911
NCBI-ProteinID:
XP_075025522
LinkDB
All DBs
Position
20:3087343..3109329
Genome browser
AA seq
1629 aa
AA seq
DB search
MKRLQRNMSVFRQTKILLWKNVLIKWRMKMQSFQEWMLSLLLLPLMFIESMFMMNIAYFP
APYSYLGQLDDPAYDATGVTIAFTPITVTTRQIMNKVALNSVMTGIKLEALENERALEEA
WISNNEIIGVVFKDNFSYHLRFPAEDVAIPNDNFGYIDNCDNFTSQYCYTPRYWYKGFLS
LQSSIDAAIIEVVANHSVWEEMKSIAGVRMKSRAVKSSVTLEYGYFMITIVMCFSPFMYF
LSINVVREKKKLKVLMKTMGLQDIAFWLSWSLLYAAYVMVLSCLLTVLMVQDAFYLSSFP
AILLLFFLYGLACIHLVFMLCSLLRTSKLAGSMGFFITFLFGCLSLTVLIENLPEPLQWF
LSLFSPFAFNAGIAKILYLEKYGMGFSFSNLMEESYFLFSTYIMLIFDSVLYMLLALYFD
KVLSGKYGIPDPPFFCLKPSYWMRRRRSSTREMPRTAASPEELLGDDIEPVPPEFVGKEA
IRLNNIKKAYKKKDKKTNALRGLSLNIYEGQITALLGHSGAGKTTLLNVLSGLTLPSEGS
ATIYNYKLSEIGDREEIREMIGICPQFNIQFEALTVRENLKTFAEVKGIKSKEVEREVQN
ILELLDISNIQDTQAEKLSGGQKRKLSIGIAMLGNPQVLFLDEPTAGLDPLSRHQVWSLL
KEHRAGRVILFSTQSMEEADMLADRKAFILHGRLKCVGSSLFLKKKWGIGYHLRIHVSES
CDLENLTSLITRYIPNVIFSGHSQYELRYKLPIESVNKFPDLFSGLDSCSDQGIINYGVS
MTTLEDVFLRLEEEATVDQEDERVLGEECAEAGPRCPDETEPGSLLLSDTGKAAISDLAL
WRQQVSAMAWVHFLKLKSSVKNLRSILLLYVVFLLPLVLQLSLIAAWESVNAWELSSAQY
FLPLGKRTHLETTSLLVHNNTGVGIEDFIRTLESQDLTVEITSEENITEDLNHNGAIKVS
RKGQSYRFTVLCHVEPVNCFPVLVNVISNALLRALNSTVHIRIWSHPFFSIEDPRFWHFF
FYFYLVYMLVLFPGFPPQFAMGYMQDYKVGARAQLRISGLFPSAYWCGQALVDIPLCWLL
LFSMFGLQFAMTNKISGNIDIFFLLITGAFGYGISIVLFTYLISFVFRKGWNCDFWSFIL
ILVCFFSYVIDKAMDFLDDAAFSLYIVSLLIPVYPLLGVTINCQMIFIDLEISAVASRND
VLMAVFAPYIHSVGFIFLLRYLEIKYGRTLLRKDPIFRISPRRESSQQHPEELEEEDEDV
KAERAAVRNAIAAPSQEERSVIIVSNLCKEYKIKQAGSVFKKKKKMATKNVSFCVKKGEV
LGLLGPNRAGKSTAIKMITGETTLSAGQVLMKRGDEATSHLQDHAPAFLGYCPQKDPLWP
DLTVHEHLWVYAAVKGMCKEDTAAAVNRIVNALQLQDCLKKKPRKLSAGITRKLCVAVCM
LGNPTVLLLDEPSTGMDPSGQRCVRKMIRAALKTKETGAILTTHHMEEAEAVCDRVAMMV
SGQLRCIGSIQYLKNKFGKGYLLEIKVKDPQCTDLLHAEISRIFPSAARQERLPSLLVYK
VPMEDALPLSQSFSKLEEAKRNFNLEEYSFSLNTLAQVFLELSREQEKDNFDLTLDGTFE
WKQLQQEDC
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacttcagagaaatatgagtgtattccggcaaactaaaattcttttgtggaaa
aatgtacttatcaagtggaggatgaaaatgcagagctttcaggagtggatgctgtctctg
ctccttctgccgttgatgttcatagagtccatgttcatgatgaacatcgcctacttccca
gcgccttacagctacctcgggcagttagatgatcctgcctatgatgccactggggtcacc
atcgcttttacacccatcactgtgaccacaaggcagataatgaataaagtggccttgaac
tctgtaatgacaggtataaaactagaggcactggagaatgagagagccctggaggaagcc
tggatttcgaataatgaaattataggggttgtatttaaagacaacttctcctatcacctc
aggtttcctgctgaggatgtggctattccaaatgacaactttggatacatagataactgt
gacaatttcacatcgcaatactgttacaccccaaggtattggtacaaaggcttcctctcc
ctgcagtccagcatcgatgcagctattatagaggtggtggcaaatcattctgtttgggaa
gaaatgaaatcaattgctggcgtccgtatgaagtcccgggctgtcaagtcctcagttaca
ctagagtacggttatttcatgattactatcgtgatgtgtttctctccgttcatgtatttc
ttatcaataaatgttgtaagagaaaagaagaagctgaaagtattgatgaagacaatggga
ctgcaggatattgcattttggctctcctggagtctgctgtatgctgcttacgtgatggtc
ctctcctgcctgctgacagttctcatggtgcaggatgctttctacctcagcagcttccct
gcaatcttactgctgtttttcctgtatggcctagcatgtatccacctggttttcatgctc
tgctccctcttgcggacctccaaacttgccggctccatggggttcttcatcacctttctc
tttggatgcctgagcctcactgtgctgatagaaaatcttccagaaccgttgcagtggttt
ctcagtctcttctctccttttgcatttaatgctggcattgcaaagattctctatttagaa
aaatatggaatgggtttctctttttctaaccttatggaggaatcatactttttgttttcg
acttacattatgctgatctttgactcagtcttgtacatgctgttagctctgtatttcgac
aaagtgctgtcaggcaaatacggcatcccagatcctccttttttctgcctgaagccctcg
tactggatgcggagaaggagaagctccaccagggagatgcccagaactgcagcgagcccc
gaggagctccttggtgatgacatagagccggtgccccctgagttcgtggggaaggaggcc
ataagactcaacaatattaaaaaagcgtataaaaagaaggacaagaagacaaatgcttta
agaggtttgtctttaaatatttacgagggtcagatcactgccttactcggccacagtggg
gctggaaagacaacactcttaaatgtgctcagtggactcactttgccttctgaaggctct
gcaaccatatataactacaaactctctgaaataggcgatagggaagagattagagagatg
attggcatttgcccacaattcaacatacagtttgaagccttaacggtgagagaaaacttg
aaaacttttgcagaagtcaagggcatcaagtccaaagaggtagagcgagaggtgcaaaac
attttggaactgctggatatcagtaacattcaagacactcaagctgagaaactgagtggt
gggcaaaaacggaagttatccattggaatagccatgcttggaaacccccaggtcttgttc
ctggatgagccaacggctgggttggatcctctttccaggcatcaggtgtggagcctcctc
aaggagcacagagctggacgggtgatcctgttcagtacccagtccatggaagaggccgat
atgctcgcagaccgcaaggcttttatcttgcacgggaggctgaagtgtgttggttcttct
ctgttcttgaagaaaaaatgggggattggctatcatttaaggatccacgtcagtgagtct
tgtgacttagagaacttgacatctctgattacacggtacatccccaatgtcatattctca
ggacacagtcaatatgagctgagatataaattgccaatagaaagcgtgaataagttccca
gacctgttcagtggcctcgacagctgctccgaccagggaattatcaattacggagttagc
atgacaaccctggaggatgtcttcctgagactggaggaggaagccacagtggatcaagaa
gatgagcgtgtccttggggaggagtgtgcagaagcaggaccgcggtgccccgacgagacg
gagccgggctccctgctgctctcggacaccgggaaggcggcaatcagcgacttggctctc
tggaggcagcaggtctctgccatggcatgggtgcacttcttaaagcttaagagttcggtg
aaaaacctgcggtccatcttgctgctctatgtggtttttctgcttcctctggttttgcaa
ctgtccctgattgctgcctgggagagtgtgaatgcttgggagctctcatctgcacagtac
ttcttgcccctggggaaaaggactcacctggagacaaccagcctcctggtccacaacaac
acgggcgtaggcattgaagactttatccgcacgcttgaaagccaagatctcacagtggaa
ataacaagcgaggaaaatatcacagaggacctaaaccacaatggggctataaaagtgtct
cgcaaaggccagagctacaggtttaccgtgttatgccacgtggagcccgtcaactgcttc
ccggtgcttgtgaacgtcattagcaacgctctgctgagagcactcaattccaccgtgcac
attcggatctggagtcatccatttttctccatagaagatccaagattctggcattttttt
ttttatttttacctcgtttatatgctggtgttattccctggttttcctcctcaatttgca
atgggctacatgcaggattacaaggtgggagctcgtgcccagctgcggatctcggggctc
ttcccctcggcatactggtgcggccaggcactggtggacatcccgctgtgctggctcctt
ctcttctcgatgttcgggcttcagttcgcaatgaccaacaagatttccgggaacatcgac
atcttcttcttgctgatcacaggtgcttttggctatggaatttctatcgttctcttcacc
tacttgatctccttcgtgtttcgcaaaggatggaactgtgatttttggtcttttatcctg
atattggtatgctttttttcttacgtcatcgacaaagccatggatttcttggatgatgct
gcattctccctctacattgtgtctctcttgattcccgtgtacccactgctgggtgtaacg
atcaactgccagatgatttttatagaccttgagatatctgctgtggcttcaaggaatgat
gtactaatggctgtctttgcaccttatatccattctgtgggtttcatttttcttcttcga
tatttggagataaaatatggaagaacacttctgagaaaggacccaatatttaggatttcc
ccaagaagagaaagcagccagcagcaccccgaggagctcgaagaggaagatgaagatgtt
aaagctgaaagagcagcagtgagaaatgccatagcggctccgagtcaggaggagagatca
gtcattattgtcagcaatctgtgcaaggaatataaaataaagcaagctggttcagttttt
aagaagaagaagaaaatggccaccaaaaatgtttccttctgtgttaaaaaaggagaagta
ttaggacttctggggcccaacagagctggtaaaagcacagctatcaaaatgattactgga
gagacgacactgagtgccgggcaggtgctgatgaagaggggagatgaagcaacttcccac
ctccaggaccacgcacccgccttcctggggtactgcccgcagaaggacccactctggccg
gacctcactgtgcacgagcacctgtgggtctacgcggccgtgaaagggatgtgcaaggag
gatacggctgctgctgtcaaccgaatagtgaatgctctgcagcttcaagattgtttaaaa
aaaaaacccagaaaattatctgctgggataaccagaaagctgtgcgtcgcagtgtgcatg
ctgggcaaccccacggtcctgctcctggatgagccatcaactggcatggaccccagtggg
cagcgctgcgtcaggaagatgattcgtgccgccctgaaaaccaaggagacaggagccatt
ctgacgacgcaccacatggaggaggcagaggcggtgtgcgaccgcgtggccatgatggtg
tccgggcagctacggtgcattggctccattcagtatctgaagaacaagtttggcaaaggc
tatctactggaaattaaggtcaaggacccacagtgcactgatcttctccatgctgagatt
tcgaggattttcccaagtgcagcccgtcaggaacggttgccctctctgctagtctacaag
gtcccaatggaagatgcactgcctctgtctcagtctttctccaagctagaggaagccaaa
cgaaacttcaacctcgaggagtacagcttctctttgaatactttggctcaggtgtttttg
gaactctcccgagagcaggaaaaggataattttgatctgactttggatgggactttcgaa
tggaaacaacttcagcaagaggactgttaa
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integrated database retrieval system
