Calonectris borealis (Cory's shearwater): 142090935
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Entry
142090935 CDS
T11211
Symbol
SMURF2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04120
Ubiquitin mediated proteolysis
cbor04137
Mitophagy - animal
cbor04144
Endocytosis
cbor04340
Hedgehog signaling pathway
cbor04350
TGF-beta signaling pathway
cbor04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142090935 (SMURF2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
142090935 (SMURF2)
04350 TGF-beta signaling pathway
142090935 (SMURF2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142090935 (SMURF2)
04137 Mitophagy - animal
142090935 (SMURF2)
09144 Cellular community - eukaryotes
04520 Adherens junction
142090935 (SMURF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142090935 (SMURF2)
04121 Ubiquitin system [BR:
cbor04121
]
142090935 (SMURF2)
03029 Mitochondrial biogenesis [BR:
cbor03029
]
142090935 (SMURF2)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
142090935 (SMURF2)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
142090935 (SMURF2)
Autophagy
Mitophagy
Other mitophagy associated proteins
142090935 (SMURF2)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
HECT type E3
142090935 (SMURF2)
Mitochondrial biogenesis [BR:
cbor03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
142090935 (SMURF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Filo_VP24
Motif
Other DBs
NCBI-GeneID:
142090935
NCBI-ProteinID:
XP_075025606
LinkDB
All DBs
Position
20:4314046..4382264
Genome browser
AA seq
803 aa
AA seq
DB search
MSNQGARRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCNGNFSAAA
WLWIVKTELTVLEFQRKTDSNYLQIIFLLPSKMQVLRGKRKDQRLDLCKLGPNDNDTVRG
QIVVSLQSRDRIGTGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHITRTTQWERPTR
PASEYSSPGRPLSCFVDENTPITGTNGATCGQSSDPRLAERRVRSQRHRNYMSRTHLHTP
PDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTAT
GRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQHQQQQQVVSLCQLPDEAECLTV
PRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIK
FRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHF
VGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMELVDPDLHNSLVWILENDITGVL
DHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGF
NEVIPQHLLKTFDEKELELIICGLGKIDVNDWKANTRLKHCTPDSNIVKWFWKAVEFFDE
ERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPY
ESYDKLYEKLLTAIEETCGFAVE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccaaggggcccggcggaacgggcccgtcaagctgcgactgacagtactgtgt
gcaaaaaacttggtgaaaaaggattttttccgacttcctgatccatttgctaaagttgtg
gtggacggatctggccaatgccattctacagatactgtgaagaatacacttgatccaaaa
tggaatcagcattatgacctatatattgggaagtcggattcaataacaatcagtgtgtgg
aatcacaagaaaattcataaaaagcagggagctggttttctgggttgtgtgagacttctt
tcaaacgcaatcaaccgccttaaagacactggttgtaatggtaacttcagtgccgcagcc
tggttgtggattgtcaagactgaactcactgtgttggaattccaaaggaagacagactct
aattaccttcaaattatttttttattaccttcaaaaatgcaagtcttaaggggtaaacgt
aaagatcagagattggatctgtgcaagcttgggccaaatgacaatgatactgttagagga
cagatagtagtaagtcttcagtccagagaccgaataggcacaggaggacaagttgtggat
tgcagtcggttatttgataatgatttaccagatgggtgggaggagcggaggactgcttct
ggaaggatccagtatttaaatcatattacacgaacaactcagtgggagcgaccaacacgg
ccggcatctgaatactccagtccaggcagaccgctgagctgttttgtggacgagaacact
ccaattacaggaacgaacggtgcgacctgcgggcagtcttcggatccccggctggcggag
aggagagtcaggtcacagaggcacagaaattacatgagcaggacacacttgcacactcct
cccgatttacctgaaggatatgagcaaaggacgactcagcaaggtcaggtctattttctg
catactcagactggtgttagcacgtggcacgatccaagagtacctagggatcttagcaac
atcaattgtgaagagcttggtccactgcctcctggatgggagatccgaaatacagcaaca
ggcagagtttattttgttgaccataacaacaggacaacgcagtttacagatccacggcta
tctgctaacttgcatttagtcttaaaccgccagaatcaacttaaagatcagcagcaccag
cagcagcagcaggtagtgtccctgtgccagcttcccgacgaggcagagtgtctgactgtg
ccacggtacaagcgagacctagtgcagaaactcaagatcctgaggcaagagctgtcacag
cagcaacctcaagctggccattgtcgtattgaggtctccagggaagagatttttgaggaa
tcctacaggcaagtcatgaagatgaggccaaaagacctgtggaaacgattaatgataaaa
tttcgtggggaggaaggccttgattatggaggtgttgccagggagtggctctatctattg
tcacatgaaatgttgaatccgtattatggtctcttccaatattcccgagatgatatctac
acactgcaaatcaacccagactctgcagtcaacccggaacacttatcgtatttccatttt
gttggacggataatggggatggctgtgtttcacggacactatattgacgggggcttcacg
ttgcctttctataagcagttgctagggaagccaattactttggatgatatggaattggtt
gaccctgatcttcataacagcttagtctggatacttgagaatgatatcacaggagtcttg
gaccatacattttgtgtggaacacaatgcatacggggaaattattcaacatgaactgaaa
cccaatggcaaaagtatccccgtgacagaggaaaacaaaaaggaatatgtcagactttat
gtaaactggcgatttttacgaggaattgaagctcagtttctggctctacaaaagggattt
aatgaagtaatcccacaacatctgctgaagacatttgatgagaaagagttagagctcatc
atttgtggactgggaaaaattgatgttaatgactggaaggcaaatactaggttaaaacac
tgtaccccagacagcaacatcgtgaaatggttctggaaagctgtggagttctttgatgaa
gagaggagagcgagacttctccagttcgtgactggctcatccagagtgcctctgcagggc
ttcaaggcattacaaggtgctgcaggcccacggctatttacaatacaccagattgatgcc
agcactaataatttgccgaaagctcacacctgctttaaccgaatagacattcctccttac
gaaagctatgacaagctatacgagaagctgctaactgccattgaagaaacatgcgggttt
gctgtggaatga
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