Calonectris borealis (Cory's shearwater): 142090941
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Entry
142090941 CDS
T11211
Symbol
PECAM1
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04148
Efferocytosis
cbor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142090941 (PECAM1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
142090941 (PECAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cbor04090
]
142090941 (PECAM1)
00536 Glycosaminoglycan binding proteins [BR:
cbor00536
]
142090941 (PECAM1)
04091 Lectins [BR:
cbor04091
]
142090941 (PECAM1)
CD molecules [BR:
cbor04090
]
Proteins
142090941 (PECAM1)
Glycosaminoglycan binding proteins [BR:
cbor00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
142090941 (PECAM1)
Lectins [BR:
cbor04091
]
I-type lectins (Siglecs)
142090941 (PECAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
Ig_C17orf99
Izumo-Ig
Ig_5
Ig_Tie2_1
E1_DerP2_DerF2
Motif
Other DBs
NCBI-GeneID:
142090941
NCBI-ProteinID:
XP_075025619
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All DBs
Position
20:4437730..4472296
Genome browser
AA seq
730 aa
AA seq
DB search
MYLALLVIFLQCSELYTQERVFTFNTVEIKVQPSVKVKNGAPMSIVCHADISKSTNFQLK
HNFTIFKDGKLVFMTVSDKGDAQYEISIARSSDTGEYECTVEAGGKTKSSNSLHVWVTGM
TKPILTAEKKEVLEGEVVKLRCELPEEVPPLYFFFRKIKMNSTPKEKLVFEPYRNFSVVE
FSVEEGDNILQFDCFGRRNVKLEFESSEHSNKTLVTVREPFIKPTLNAKPSSNITEGDRI
QFECSTVVARMRDIEIILQKNRTILNSVRDEKLLKYSAVATLEDSGEYLCKVEQGRASKT
TKLNVVVAELFPKPILAASMNKLDENKELTLSCSISGFRKANFSILRKNSNGDIWLKNSR
NLTMRVNVNDTGSYICKAEVKGIVKESKPVRINIYAPVSKPTLSVVSGLPEVVLGKPLRL
ICRSMTGTPPITFTFYKGNEPKKIVINDTYATFLDENIRQNDKRGYKCDARNNHSSGMKT
SNILNITVIVPIRNASLGSIPNGEVEDGSETAFLCSVEEGSWPIHFRLFRKTDHEVLLFE
KIEHADRVVWRKETMKRQDTGTYYCMASNRANVDVKSHPITISVILAAWQKGLVAAFVLI
AIAGAVTLTLWWFLCKKKKAKGPSMEMSGSALATNLTSEKLTRQHNDGDYYSGSGYIEDS
ENHMKATDESKGPELESAEVEYTEVEVSTLDPHRAPVQKGTETVYSEIRKANNDSVENRH
SRIQGHPDAT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttgctcttctggtgattttcttgcagtgttcagaactttacactcaggagaga
gtttttactttcaacacagttgaaatcaaggttcagccatctgtcaaagtaaagaatgga
gctcctatgtcaattgtctgccatgctgacattagcaaaagtaccaatttccagctgaag
cataattttacaatttttaaggatggcaagcttgtgttcatgaccgtatcagacaaagga
gatgcacaatatgagatatctattgctagatcttcagatacaggagagtatgaatgtact
gtggaagccggcggaaagacaaaatctagtaactccttacatgtttgggtaacaggaatg
accaagccaatcctgactgctgagaaaaaagaagttttagagggtgaagttgtgaaatta
cgttgtgagctgccagaagaagtacctcctttatatttctttttccggaagataaagatg
aattcaacacctaaagaaaaacttgtatttgaaccatacagaaatttttctgtagtggaa
ttttctgttgaagagggagataatattttacaatttgattgctttggtaggagaaatgta
aaactcgaatttgaaagctcagaacacagcaacaaaacacttgttacagtcagggaacca
tttataaagcctactctgaatgctaaaccctcaagtaatattacagaaggagacagaata
cagtttgaatgctcaactgtggtcgcccgaatgcgtgacattgaaatcatactccagaaa
aacagaacaatactgaacagtgtacgagatgagaaacttctgaaatactctgcagtagct
actctagaggacagtggtgaatacctgtgtaaggtggagcaagggagagcatctaaaacc
accaaactgaatgttgttgtggcagagttattccccaagccaatattggctgcttctatg
aataagctggatgaaaataaagaattaactttgagttgcagcattagtggttttcggaaa
gctaacttctctatattacggaaaaattcaaatggagacatctggttgaaaaattctaga
aacttaacaatgagagttaatgtgaatgatactggatcctatatctgtaaagctgaagta
aaaggaatagtcaaggagagcaaacctgtaaggataaatatttatgctccagtctccaag
ccaactctttccgttgtcagtggtttaccggaggtggtgttagggaaacctctacggtta
atctgtcgttcaatgacaggaacaccgccaataacattcacattctacaaaggaaatgaa
cctaagaaaatagtaattaatgacacatatgctacattcttggatgaaaatattagacaa
aatgacaaaagaggatacaaatgtgatgctagaaataatcactccagtggtatgaaaact
agcaatattctaaacatcacagtaatagtacccatcaggaatgccagcttgggcagtatt
ccgaatggagaagtggaagatggcagtgagactgcttttctctgctctgtggaagaagga
tcttggccaatccacttcaggctttttaggaaaactgatcatgaagttcttctatttgaa
aaaattgaacatgcagacagagtcgtgtggcgcaaggaaacaatgaaaaggcaggacacg
gggacatattactgcatggcttctaatcgagctaacgtggatgtgaaaagccatccaata
accatcagtgtcatcttagcggcttggcagaaaggactcgttgctgcatttgtcctaata
gctatcgcaggagcagtaactctcactttgtggtggtttttgtgtaagaagaaaaaggct
aaaggaccatccatggagatgtctggttctgccttggctacaaacttgacaagtgaaaaa
ctgacaagacagcacaacgatggagactactattcaggatcaggttacattgaagatagt
gaaaatcacatgaaagcaacagatgagagtaaaggacctgaacttgagagtgctgaggtg
gagtacactgaagttgaagtatcaacgcttgatcctcacagagctcctgtacagaagggg
actgaaacagtttatagtgaaatcagaaaagctaataatgattctgtggaaaacaggcat
tctagaatacaagggcatcctgacgctacttag
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