Calonectris borealis (Cory's shearwater): 142090962
Help
Entry
142090962 CDS
T11211
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04622
RIG-I-like receptor signaling pathway
cbor05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
142090962 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142090962 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142090962 (TRIM25)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142090962 (TRIM25)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142090962 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
ANCHR-like_BBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-B_box
zf-UDP
zf-RING_4
EGF_integrin
End3
Motif
Other DBs
NCBI-GeneID:
142090962
NCBI-ProteinID:
XP_075025694
LinkDB
All DBs
Position
20:5237873..5248232
Genome browser
AA seq
636 aa
AA seq
DB search
MAALSRSVLEPGLAGLEEELTCSICLCLFNSPVTVPCGHNFCASCLELSWAGLSGNFSCP
QCRTTFPGRPQLQKNTVLCRVVEQLQGCPGAGAEEEEEEEGAAGCGAEELPIYCDSCLQA
PAVQTCLTCTASFCAEHLRPHQDSPAFRDHQLCPPLRDLQQRKCPRHNKLFEFFCSEHGS
CICSLCLLGHKLCHTSPLQLAKANAESALKKRLMDLHNQSEKVARAMSTVKTNQSQAAET
ASRKKDLIRSEFSETKALIEERENQTLKVIADEEKRVCSKFDFIYGVLGSKKNEIHSLRD
QIEMALTEDDDVLFLKRAAALQRTLTRDAFVPVIEMDQNLIHSAYQSAINLKDIVKLAVT
QCKEKTAEAKPTPGKTKPPPAAPPNKTSGGKKPPGPQHTQKEKIAHQTQATLQVEADTKE
KKKPVKVAPTTGTVNAAAAVAAKELIESFLKKSREELLQYAANITLDYNTAHNKVILSER
YTRMSVSDTPLSYNHHPQRFTDCSQVLGFQCFKRGIHYWEVELQQNSFCGIGICYGSMAR
QGPESRLGRNSSSWCIEWFNSKISSWHNDVEKCLPSVKTTKIGVLLHCEGGFVIFMAVGQ
KHNLIYKFKTQFTEALYPAFWLFSSGTVLSLCQAEQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgtcccgctcggtgttggagccgggcctggcggggctggaggaggaactg
acctgctccatctgcctctgcctcttcaacagccccgtgacggtgccctgcgggcacaac
ttctgcgcctcctgcctggagctctcctgggccgggctgtcggggaacttcagctgcccg
cagtgccggaccaccttcccgggccgcccgcagctgcagaagaacacggtgctgtgccgg
gtggtggagcagctccagggctgccccggggccggggccgaggaggaggaggaggaggag
ggggcggcagggtgcggggcggaggagctccccatctactgcgacagctgcctgcaggcc
cccgccgtgcagacctgcctgacctgcaccgcctccttctgcgccgagcacctgcggccg
caccaggacagccccgccttccgcgaccaccagctctgcccgcccctgcgcgacctgcag
cagcgcaagtgcccgcggcacaacaagctcttcgagttcttctgcagcgagcacggcagc
tgcatctgctccctctgcctcctcgggcacaagctgtgtcacaccagccccctgcagctg
gccaaagccaacgccgagtcggcgctgaagaagagactgatggacctgcataatcagagt
gagaaagtcgctcgagcgatgagcactgtgaaaacaaaccaaagccaagctgctgagaca
gcttccagaaagaaagatttgatcagaagtgagttttcagaaactaaagctttaattgaa
gaaagagaaaatcagaccttaaaagtaattgcagatgaagaaaaaagagtttgcagtaag
tttgattttatttacggtgttctgggaagtaagaagaatgaaattcactctctcagagat
cagattgagatggcactgactgaagatgatgacgttctgtttttgaagagagcagcagca
ctgcaacgaacgttaacaagagacgcttttgtccctgtaattgaaatggaccaaaacttg
atacattccgcttatcaatctgccattaaccttaaagacattgtgaaacttgcagtgact
cagtgtaaggagaaaacagcagaagcaaaaccaacacctgggaaaactaagccccctcca
gcagctcctccaaacaaaacctctggtgggaaaaagcctccgggaccacagcatacccag
aaagagaaaatcgctcaccagactcaagccactttgcaggtggaggcggataccaaggag
aagaagaaacctgttaaagttgcaccaaccacgggaacagtaaacgctgcagctgccgtt
gcagctaaagagcttattgaaagctttctgaagaaatccagagaggagcttttgcagtat
gctgctaacatcacgctggattacaacacggcccataacaaagtgattctgtctgagagg
tataccaggatgtctgtctcggacacccccctgagttataaccaccacccgcagcgcttc
accgattgttcccaagtgctgggcttccagtgcttcaagagaggcatccactactgggag
gtggaactgcaacagaacagcttctgcggcattggcatctgctacggcagcatggcccgg
cagggtccggagagccgcctggggaggaacagcagttcttggtgtattgagtggtttaat
tccaaaatatcatcctggcataatgatgttgaaaagtgcttacccagcgtgaagactacc
aagattggtgtgctgctccactgtgagggagggtttgtgattttcatggctgttgggcag
aagcataacttgatctataaattcaaaacccagtttactgaagccttgtaccctgccttc
tggttattttccagtggcactgttctctccctctgccaagcggaacagtaa
DBGET
integrated database retrieval system
