KEGG   Calonectris borealis (Cory's shearwater): 142091191
Entry
142091191         CDS       T11211                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor03015  mRNA surveillance pathway
cbor05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    142091191 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    142091191 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbor03021]
    142091191 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:cbor03019]
    142091191 (CPSF4L)
Transcription machinery [BR:cbor03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     142091191 (CPSF4L)
Messenger RNA biogenesis [BR:cbor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     142091191 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_12 zf-CCCH_RBM22 zf-CCCH_4 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 142091191
NCBI-ProteinID: XP_075026226
LinkDB
Position
20:1726674..1728942
AA seq 229 aa
MQELVAGVEKIRFDLEADVEQQRGAQPLPFPGMDKLGAAVCEFFHRGLCTKGVRCPFRHV
GGEKTVVCKHWLRGLCKKGDGCDFLHEYDVSKMPECYFYSRFGECSNKDCPFLHIDATAS
TMGCPWYDRGFCRHGPLCKYKHTRRVMCANYLVGFCPEGPKCKFMQYVRGRLGGSSAHSR
PATAGDGPLSEVDMAIACLGQGQGLKAGMMTSSTDPSKVTQGRSYAIPS
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcaggagctggtggctggtgtggagaagatcaggtttgacttggaggctgatgtggag
cagcagcgaggagctcagcccctgcccttcccgggtatggacaagctgggggcagccgtc
tgtgagttcttccatcgagggctgtgcaccaagggcgtgcggtgccccttccggcacgtc
ggcggggagaagacggtggtgtgcaagcactggctgcgcgggctctgcaagaagggcgac
gggtgcgatttcctgcacgagtacgacgtgagcaagatgcccgagtgctatttctactcc
aggttcggtgagtgcagcaacaaggactgtcccttcctgcacattgatgccaccgccagc
accatgggctgtccctggtacgaccgcggtttctgcaggcacggtcccctgtgcaagtac
aagcacacgcggagggtgatgtgtgccaactacctcgtcggcttctgcccagaaggaccc
aagtgcaaattcatgcagtacgtacggggcaggctgggggggagctcagcacacagccgg
cctgcgacagcgggggacggccccctctccgaggtggacatggccattgcgtgtctgggt
caaggacaaggcctcaaggccgggatgatgacgagcagcacggatccatccaaggtgacg
cagggaaggtcctatgccattccctcttga

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