Calonectris borealis (Cory's shearwater): 142091282
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Entry
142091282 CDS
T11211
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142091282 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142091282 (NUP188)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142091282 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
142091282
NCBI-ProteinID:
XP_075026405
LinkDB
All DBs
Position
21
Genome browser
AA seq
1735 aa
AA seq
DB search
MAEGGLCERSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSTTSAEKIK
ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLLCYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICILRCVLLLLTYFQDERHPYTAQYFQCVEKLDKELVPNYQKQFEALYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKMFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNERI
HQEMDNQLLQLGDVSHHAPVLLAWALLRHTVSPEESTNIIRRMGSTAIQLNVFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAEKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISLPVDVIASCVNCLTVLAAWMPDKVWTDLHHTGFLPFVANPVSSMNPMISAEGMNAG
GYGNLLMSIEQPQGEYSVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPSSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGSLPP
PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLA
YHVAETEGSSCASMTEYQMLISAWRMLLIISTSHADIMHLTDSAVHQQLFLDVLNGTKVL
LLVPMSVSCLQLGSMLCTLLLILLKQWKSELGSVDKIINSLTQILEGVLQADQQMMKKTK
AKVFSALITVLQIKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQVTRKVLPTIFAALEISLR
VKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTHSVCLPLLSVYQLSTNGAIQTSASSR
KSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSLAC
LEEADHTVGFILQLSNFRKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQTK
NGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFTPD
VCQILLDQSLDLAEYNMLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKEPF
PQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSELS
TLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHLQR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcgggctgtgcgagaggagcagcagagaattgtggacaattcttctgggc
agatcagctttaagagaaccagcacagattgcggcagaattgaacaagcactggcagaga
ttgttagagggactttcatactataaaccaccaagtacgacttccgcagaaaaaataaaa
gctgataaagatgtagctgctccactaaaagagttgggtctgagggtcagcaagtttttg
ggtctggatgaagagcagagtgtgcagttgttactgtgttatcttcaagaggattacaga
ggaacaagggactccctgaagacagttcttcaggatgaaaggcagagtcaggctctgatg
ctgaagcttgctgactattactatgaagagaggatctgcattctgcgctgcgtcctcctt
ttactcacttattttcaggatgagagacacccttacacagcacaatacttccagtgtgtt
gaaaagttggacaaggaactagttcctaattaccagaaacagtttgaagcgctgtacaaa
gcagaagctcctacatgggaaacacatggaaatctcatgacggaacgtcaggtttcccgt
tggtttgtgcaatgcctccgtgaacagtccatgctcctggaagtcatcttcctctactat
gcatactttgaaatggcacctgatgagcttctggcatttgcaaagatgttcaaagaacag
ggatttggcactagacaaaccaacagacatttggtagatgagagcatggatcacctggtg
gatcgtattggctactttagtgctcttattctggtggaaggcatggaaattgactccctc
cacgagcgtgctttggatgacaggacggaggagcacaagttagccaataatgagcgcatc
caccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctccggtg
cttttggcctgggctctgctccgtcacactgtaagcccagaggagtcaacaaacattatc
aggagaatgggcagcactgctatccagctgaatgttttccagtatctgacaaagcttctg
cgatcgctgagcagtggggggaagaattgtacagccagcacagcttgtatgtgtatttat
ggacttctttccttcgtcctgacatcactggaattacatacattgggcaatcagcaggat
ataattgatgctgcatgtgaagttctggcagcttccagcattcctcagctcttctggaag
acagaacctactgcgggtctgggtattatcctggacagtgtgtgtgggatgttcccccat
cttcttactcctctccttcagctgctccaagcccttgtgtctgataaatctactgcagaa
aaggtatacagtttcctggataaaatgtccttctatatcgaactgtacaagcataaacct
cctgacgtgatctctcatgaagatggcacactttggcgaagacaggctccaaagctcctc
tatcctcttgggctaggtcaaacgaatctgcggatacctcagggaacagtgggccaagtg
atgctggatgatcgggcttatttggtacgatgggagtattcctacagcagctggacactg
tttacctgtgagattgagatgctgctccatgttgtatcgacagcagatgtgattcagcat
tgccagagggtcaagccaataattgatctggttcataaagtcatcagcactgatgtatcg
atagcagattgccttctgccaatcacgtcgcgaatctacatgctcctgcagaggctaaca
actgtaatctctctacctgtggatgttattgcttcttgtgtcaattgtttgacagtactg
gctgcttggatgccagacaaggtttggactgaccttcaccatacggggtttttaccattt
gttgccaatccagtatccagtatgaatcccatgattagtgcagagggaatgaatgctggg
ggctatggaaacctactgatgagcatagaacagcctcaaggcgagtacagtgttaccatc
tccttcctgaacctgatcacaactcttgtgcggggacaacttggtagcacccagagccaa
ggacttgtgccttgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatgg
cgttataactctcatggagtgagagagaaaattggatgccttattctgcagttgatccat
gctatactgaatttatgccctgaaatggatcctcgcagcagcaacgcccccagccttcag
tccttgtgcatcttcagcctggccaacactgaagcggggcaggctgtcattaacatcatg
ggaattggtgtggacaccattgatatggtgatggcctcccagtctagtagtgatgagtca
caaggccaaggtcaactgctgatccaaacagttaagctggcgttctcggttaccaataat
gtaatccggttgaaaccctcctctagtgtggtatctccattagaacaggcgcttactcag
catggtgctcatggaaacaatcttattgcggtcttggccaaatacatctaccacaagcat
gaccctgcacttccacgcctggccatccagttgctcaaacgactggctacggttgctccc
atgtctgtctatgcctgccttggtagtgatgctgctgccatccgtgatgccttcctcacc
cgcctgcagagcaagattgaggacatgcgtattaaggtcatgatactggaattcctcaca
gttgcggtggagacacaacctgggctcattgagctgttcctgaacttggaagtgaaggat
ggcagtgacggatcaaaggaattcagcttaggggagtggagttgcctccaagtagtctta
gagctgatagactccaaacaacaggagaggtactggtgccctcccctcttgcatcgtgct
gccattgccttcctgcatgctctgtggcaggaccgtcgagatagcgccatgctagttctg
cggacaaagccaaagttttgggaaaatttaaccaatcccctctttgggagcctccctcca
ccttcagaatcatcagagctcagtgtcttggatacctgtgccttaatcatgaaaatcatc
tgtttggagatctactatgttgtcaagggctcactggatcagtccctgaaagacacgctg
aagaatttctccaccaaaaagcgctttgcctattggtcagaatatgtgaagttgctggca
tatcacgtggcagagacagagggtagcagctgtgcctccatgacagaatatcaaatgctg
atctcagcctggcggatgctgctgataatctctactagccatgcggatataatgcatctg
actgattctgcagttcatcagcagttgtttctggatgtgctaaatgggaccaaggttttg
cttctagttcccatgtcagtgtcctgtctgcagctggggtccatgctatgtacccttctt
ctgatcctgctcaaacagtggaagagcgagttgggttctgtggataaaatcataaactcc
ttgacgcagattctggagggagtactacaggcagatcagcagatgatgaagaaaaccaaa
gccaaagtgttctcagctcttatcactgtgctgcaaataaaggagatgaaagtgaatgag
atcccacagtattcccagctggtgttgagcgtgtgtgaaacactccaagatgaggtcatt
gcgctctttgatcagactcgacacagcttgaccttgggagatgctacagatgacaaggac
agcatggaaacagatgatgcctcccgagttaaacacaaggaccagcgagatggggtatgt
gttctgggtctgcatctggctaaagagctctgtgaagttgatgaagatggagactactgg
ctacaggttactagaaaagtgcttcctactatctttgctgcgttggagatcagcctgaga
gttaaacaaaaccttcacttcacagaggcctcattacatttactgctgaccttagcaagg
actcagcagggagcagcagcagtggctggagctggtgtcacacacagtgtctgcctgccc
ctcttgagcgtgtaccagctcagcactaacggagccattcagacatctgcttcatctcga
aagtctctggatgccccctcgtggcctggggtctatcgtctctccatgtccctgatggaa
cgccttcttaaaacacttagatacaacttcctgacggaagcattggactttgttggtgtc
catcaagagaggattcttcagtgcctgaatgcagtacggacagtacagagcttggcctgt
ctggaagaggctgatcacactgttggcttcattcttcagctctcaaatttcagaaaggag
tggcatttccacctgccacagcttatgagggacatgcaggtgaatctgtgttacctgtgt
caggcctgtacctccctcctgcacagccgcaaaatgctccagcactacctgcagacaaaa
aatggtgattcccttccatcaagtgtgactccacgggtgcagcgtaatccccaagcctcc
tccaaacatcccagccctgagtcagaagcagcagagcagaaagcactgcttacggtgcag
tacagcctcttgaaaatcctcagcaaatctcttgccgccctgcgtcatttcaccccggat
gtctgccagatcctccttgatcagtcactggaccttgctgagtacaacatgctcttcgtt
ttgagtttcaccacaccagcctttgactcagatgtcgcaccttcctttgggaccctgctg
gccacagtcaatgtggcccttaacatgttgggagagctggataagaagaaggaacctttc
cctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctgctcatg
tttacaatggaaaactgtttctacctgctcatctcccaggctgttcggtacttgagagac
ccagctgtgcatccccgggataagcagcggatgaaacaggagctcagctctgagctgagt
acgctgctctccagcctgtctcgttacttccgccggggtggtccctcttcacctgccagc
ggggttcttccctctccccaaggaaagtctgcctccaagctgggtcctgaggggcaggag
cctttgtttcagctcgtgcaggcctttgtccggcacctgcagagatag
DBGET
integrated database retrieval system
