Calonectris borealis (Cory's shearwater): 142091443
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Entry
142091443 CDS
T11211
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142091443 (SEC16A)
Membrane trafficking [BR:
cbor04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
142091443 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
142091443
NCBI-ProteinID:
XP_075026809
LinkDB
All DBs
Position
21:9533516..9565557
Genome browser
AA seq
2473 aa
AA seq
DB search
MQQPPQTVPAGAAAPPPAGIAQNMYWRNSSLSKRANATAAPVQPVTDPFAFGRQTPQGSP
LDNPSKGNALVMQSSSPAVFPQPAIMHTSPSRAGDNPHGPHTSLAAPVSQPGINTNTFSN
VPIPSPSPGYVINSTTEVHPNADLGLHGPAVPLHYNTGAAVENSFSVHPGMVSASNKPRQ
DVSRDPNDVPSGPNATALFPPLPQQAMSQWRPVQGNLQSPVRNFVPYPEPPSQIDVHNIS
QSSLSTSHPPPQTNLQQGPVHQGIPQNIMQAPLSVGCEKNGKNGSANSSHHMNSIQPGNV
FRQNTEMTNAWLSQPYQEPFYPQPPLQDFSFVIPTAQENNPKTQSPDTSETSNRPIPTDR
DSGTLSMFFKGDEAENEEILSSEKNYIVEKTEFDACQPNSASLYHQPMHPQRVATNVLSQ
AQIGTGSANEMVQKGMDVQYFPKIVSQQETQATKHSMFVCDDKARVGDTSGNGGSQYENV
ENLECIQNQEVLPSEPQNISASSPAAGPDLYRYGSFPGQMLPKNAVVSHAEGGPNLEAPD
SLPHPVRPDSVSSNYSNISHRSASSSARPQEQVGTFIQQESGKPDEESSASFFKQIDSSP
LGGDSSELNLGKNYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQAK
MVVELRENHSNQKNIKKNTAVPAASPGNLEQPPDNLETIFMPQVHPLPLAVSGEAGNMLH
SGPVTENIQSVSERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPA
KQTVEVIQPPEEGLSNQQPSKPGTIAVQLSQDGNISSENLENPPKMGEEEALQSQASSGY
ASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENIQPMKDSGVGDKP
AIGPQISHAGGIISGENVPLPVMQVGSLLVNALPNTNLLKHNLLQSPVNSSDTASNQPAN
LLMKTPLNLAPEGQKNVNMEGFVPEFASKPGSNASISPGMNLPSGSASALVPPVNSVVQA
NNSANHSKSKEEAAGVLDFTVSRTLEKSSASNSVQVHNQSLSGGPVYPQQSAGSAGQVGP
EMHDKQHFYQQVTKDVQHQAVSDRAVQGALPSQPQMQAAQMQQPTSPGQSSIPSNYQIAA
GTKAMQASQQRENQVMSNHPQPVGPQEAGSAQLATRYDQTSPDKQPVSGQPLSAPTSTAP
STTTSQSVVPNVQQDLQRPSLPQTPQDAFGPPQNPYYYYRHPYDAYQPPYPPSYPPADPR
TAAHLYYMEDSYGQYDPRYRHYDSTSTAYMEPGSYRYSEPERPSSRASHCSDRPSSRQGY
TEDYYTKSGWSDYYPGYYPNSYDYGDPSRWERYSSAYDPRYRDPRSYDQRYWYDAEHNPY
QKREAYPYGNRHDRYEDNWRYDPRFTGSFDDESEPRRDPYGDEFDRRSVHSEHSGHSLRS
SRSVHSHQSSFSSRSQQSQLYRSNHDLTANTYETTAQAVSLHTDYPYGGYADNFDGQQPF
TDYGYSTETGWSAVEQAPLRPSTPEKFSVPHICARFGTGGFLIKVLPNLPSEGQPALVEI
HSMETMLQHSPEQEEMRAFPGPLAKDDTHKVDVINFAQNKATQCFKNENLIDKESASLLW
DFIVLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEAQ
LSFLTDSLITTIDSLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRTHA
RVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLE
SRTIATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFFKFATNEA
IQRTEAYEYAQSLGTQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHY
YSPVLIGQLIQVSSQLCLFDPQIKEKPEQESFIEPSWLVRLRHVDGQIKEGAIAYNTDRS
TPPTCACSTPSSELDRASQCDGAGVGRDMGPGAENALLASLLPNMAQQMQSVQLMPSVPQ
AVLDGSAAMISPGDQEAVRSVPFYSVASQPIGPGPGFAAPGFSNPYGTEPSPLYLGSALP
PGGPPQEIEPRSEEQTNLETGMQRIAPESPSQNSFPEQREEDFYGRMASMAPGRRSRSAS
QSSAHMGYGRRSRTTSESSAHSVGRERSNSAAKQPSPPPSVPVGKETKKETKKEPAPRKT
GANWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGLPKVPQ
TVPPGPGGPPSAPVNMFSRRAAGSRARYVDVLNPGGTKSSGAVPAPSDLFAPLAPMPIPA
NVFVPNSVPGEPQPMEGSSAAEHTPAANQTNTDPAAAVEPEYLNPAILPPGSGLPVSNPD
GSQSGELSRSSSMSSLSREVSQHFNQPATVPPSGGPSAGTVPFYNPSQFAQSPAATGSSR
LGRIGQRKYPTLK
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagactgttccagcaggagcggcagctccacctcctgcaggcatt
gctcagaacatgtactggagaaacagctcgctcagtaaacgagcaaatgcaacagctgcc
ccagtgcagcctgtgacagacccttttgcatttggcagacaaactccacagggttcccct
ttagataatccatccaagggcaatgcattggttatgcaaagttcttccccagcggtgttt
ccgcagccagccattatgcatacttcaccgtcacgtgcaggggacaatcctcatggaccg
catacatctttagcagctcctgtatctcaaccgggaataaataccaatacgttttctaat
gttccgattccttcaccatccccaggatatgttataaatagtactacagaagtgcatcca
aatgcagatcttggactccatgggcctgcagtaccattgcattataatacaggagcagca
gttgaaaattctttcagtgtgcatcctggaatggtgtctgcgtcaaacaaacctagacaa
gatgttagtagagatccaaatgatgttccttcaggacccaatgcaacagcactcttccct
ccactgcctcagcaggctatgtctcaatggaggcctgttcaaggtaacctgcagtctcca
gttcgaaattttgtgccctatcctgagccgccttctcagattgacgttcataacatttct
cagtcttctcttagcacttctcatcctcctccacagacaaatttacagcagggtcctgta
catcaaggtattccacaaaatatcatgcaagcgcctttatccgttggttgtgaaaagaat
gggaaaaatggctctgcaaatagcagtcatcacatgaacagcatccagcctggaaatgtg
tttaggcagaacacagaaatgactaacgcttggttaagtcaaccataccaggaaccgttt
tacccacagccaccgttgcaagacttcagttttgtcattcccacagctcaggaaaataac
cccaaaacccagtctccagatacgtctgaaacatcaaatagacctattcccacagatcga
gattcaggaactctctctatgtttttcaaaggggatgaggcagaaaatgaagaaatactt
tcatctgaaaaaaattacatagttgagaaaacggagtttgatgcttgtcagccaaattcg
gcatccttgtatcaccagccaatgcatcctcaacgggttgcaactaatgttctctctcag
gcgcagattggtacaggttcagccaacgagatggtacaaaaaggaatggatgtccagtac
tttcctaaaattgtaagtcagcaggagacacaggccactaagcactctatgtttgtttgt
gatgacaaggcacgtgtaggtgacacatctgggaatggtgggtcacagtatgaaaatgtt
gagaacctggagtgcattcagaatcaagaagtgctgccaagtgaaccacagaacatcagt
gcttcatcccctgctgctggtcctgatctgtacagatatggatcctttccaggtcagatg
cttccaaagaatgctgttgtgagccatgctgaaggaggaccaaatttggaggcacctgat
tcattacctcatcctgtccggccagacagtgtatcttcaaactatagcaacattagccat
aggagcgcttctagctcagcaagacctcaagagcaagtcggtacatttattcagcaagaa
agcgggaagcctgatgaagaatcttctgctagcttctttaaacagattgactcctctcct
ttgggaggcgattcaagtgagctaaacctgggcaagaactaccatggtaatctatcccag
cctccaactccaagtcctcctaagcctacaggggtatttcagacgagtgcaaatagttct
tttgaacctgtgaggtcccatggagttggtataaaacctgcagagattgaccaagcaaag
atggtggttgaattaagagagaaccactcaaaccaaaagaatatcaagaagaatacagct
gtaccagctgcgtccccaggcaatcttgaacagccaccagataacctggaaactattttc
atgcctcaggtacacccactgcctcttgcagtcagtggtgaagctggaaatatgttgcac
tctggacctgttacggaaaacatacaatcagtatctgagagaaggtcctcaacaagagct
cagggagcagttaagaagtgtgatagcccagcaacaactttgtgggctcataatgagtta
cctaattttgggggaaacgtgcttctagctcctgctgctcctgcagtgtacgtacctgcc
aaacaaactgtagaagtcattcagccaccagaagaaggcctgtctaatcagcagccaagt
aaaccagggactattgctgtgcagctttcccaagatggaaatatatcttctgaaaatctt
gagaatcctcccaaaatgggagaagaggaggcacttcagtctcaggcaagttctggttat
gcaagtttgttgtcttctccacctacagagtctttgcaaaatcagcctatcctgattgct
cagcctaatcaaagctataacttggctcagccaattaatttttctatttctctatctaat
cagctaagcagcaatgaaaacattcagccaatgaaggactctggagttggggacaagcct
gcaatcggtccccaaatttcacatgctggtgggatcatttctggggaaaacgtgccatta
cctgtgatgcaagttggatctctattagttaatgcacttccaaatactaatctgttaaaa
cataatttattacaaagccctgttaattcctctgatactgcttctaatcagcctgcaaac
ttgcttatgaaaacgccgcttaatttggctccagaagggcaaaagaatgttaatatggaa
ggttttgttcctgaatttgctagcaagccagggtctaacgcatccatttctcctgggatg
aatctccccagtggaagtgcaagtgcactagtcccccctgttaattctgtagtacaggct
aataattctgcaaatcattcaaagagcaaagaagaagctgctggagtgctcgacttcaca
gtatcacggacattggagaaaagcagtgcaagtaattctgtacaggtgcataatcagtca
ctttctggtggtccagtgtatcctcaacagtcagctggtagtgctggtcaggtgggtcct
gagatgcatgacaaacaacatttctatcaacaggtcacaaaagatgtacagcatcaggct
gtatcagacagagctgtacagggagcattgccatctcaaccacaaatgcaagcagctcaa
atgcagcaaccaacatctcctgggcagtcctccattccttcaaactaccagattgccgca
gggactaaagccatgcaggcatcacagcagcgtgagaaccaggtgatgagtaaccatcct
caacctgtgggtccccaagaggcaggttcagcacagctggcaacaaggtacgatcagacg
agtcctgataagcaaccagtgtctggacagccgttgagtgctccaacttccacagcccct
tctaccaccaccagtcagtcagtcgtgccaaatgtgcaacaagacctgcagcgtccatcc
ctgcctcagactcctcaggatgcctttggtccacctcagaacccttactactactataga
catccttatgatgcttaccagcctccatatccgccatcttatcctcctgcagaccctaga
acagcagctcatctttattacatggaggatagctacggacagtatgacccacgttacaga
cactatgatagcaccagtactgcttatatggagcctgggagctatcggtattctgagcct
gaacgtcctagttccagagctagtcactgctctgacaggccttcttctaggcaagggtat
actgaagattattacacaaaaagtggatggagtgattattatccaggctattacccaaac
tcatatgattatggagatccaagtcgctgggaacgttactcgtcagcatacgaccccaga
tacagagatcctagaagttacgatcagaggtattggtatgatgctgaacacaacccttac
cagaagagagaagcgtatccatatggcaacagacatgaccgatacgaagataactggaga
tacgatcctcgttttactggaagttttgatgatgaatctgaaccccgcagagatccttat
ggtgatgaatttgatagacgtagtgtccacagtgagcattctggtcatagtctccgtagc
tcccgcagtgttcacagtcaccagagtagtttcagctctcgctctcaacaaagccagctg
tatagaagtaatcatgatctaacggctaatacgtatgaaactactgcgcaggcagtgtcg
ctccacacagattatccatatggcggatatgctgataactttgatggacaacagcctttt
acagattatggctactcgactgaaactggatggtcagctgtagaacaagcacctttaagg
ccctcaacacctgagaaattttcagtgcctcatatctgtgctaggtttggaactgggggc
ttcttaataaaggtgctgccgaacctgccttcagaaggacagccagctctggttgaaata
cacagtatggagactatgttacaacattctccagagcaagaagagatgagagcatttcct
ggtcctcttgctaaggatgacacccataaagtggatgttattaattttgcacaaaataaa
gctacacagtgctttaagaatgaaaatttaattgacaaagaatctgcaagtctgctttgg
gactttattgtactgttgtgcaggcagaatgggactgttgtgggaaccgacctggctgaa
cttttgctccgagatcataaaacagtgtggcttcctgggaagtcccctaatgaggcaaat
ttgattgatttcactaatgaagctttggaacaagtggaagaggaatctggtgaagcccag
ctctcatttctcactgatagtcttataaccacaattgacagtcttgagaaagagacagag
agattcagagagttgctgctttatggccgcaagaaggatgctttggagtctgccatgaag
catggtttatggggtcatgctctgctacttgccagcaaaatggacagcagaacacatgca
agagttatgaccaggtttgccaacagtctcccaattaatgaccctctgcagactgtttac
cagctcatgtctggaaggatgccagctgcatccacgtgctgtggagatgagaaatgggga
gactggaggcctcatctagcaatggtgttatccaacttgaccaataatgtggacttggaa
tccaggaccattgctaccatgggagacactcttgcttctaaaggcctgctggatgctgct
catttttgttatcttatggcccaagttggttttggagtttacacaaggaagacaacaaag
cttgtcctaattggatcaaatcatagcttgccattttttaagtttgccaccaatgaagcc
attcaaagaacagaagcttatgaatatgcacagtcactaggaactcagcctggctgcttg
cccaatttccaggttttcaaattcatctatgcttgccgactagctgaaatgggacttgct
gctcaggctttccattattgtgaagtgatttccagaactgtccttaaagatccccattac
tattcacctgtacttattggccagctaattcaggtgtcatcacaactatgcctgtttgac
ccacagataaaagaaaaaccagaacaggaatcttttattgaaccttcatggttagtaagg
cttcgacatgtggatggacagatcaaggagggtgcaatagcttataacacagacagatcc
accccaccaacatgtgcatgtagtacaccaagctctgaattagaccgtgctagtcaatgt
gatggagcaggagttggccgtgacatgggtccaggtgctgaaaatgcattgttagcatcc
ttattacccaatatggctcaacagatgcaaagtgtgcagctgatgccttcagtacctcag
gctgtccttgatgggtcagctgctatgatttctcctggtgaccaggaagctgtccgaagt
gtccctttctattcagtggcttctcagcctattggaccaggacctggctttgcagctcca
ggattttcaaatccgtatggaactgaaccatcaccactgtatttagggtcagcactaccg
ccaggaggaccaccacaagaaattgaaccacggtcagaagagcagacaaacctggaaaca
ggaatgcagagaattgccccggagtctccttcacaaaactctttccctgaacagagagag
gaggatttctatggcagaatggctagcatggcaccaggacgaagatccagatctgcatct
cagtcttcagcacatatgggctatgggcgaagatcacgaacaacttcagagtcctctgct
cattctgtgggacgagagagatccaactctgcagcaaaacagccctctcctcctccctct
gttcctgtagggaaagagactaaaaaagaaacaaaaaaggagccagcacctagaaagact
ggtgcaaactggtttcgctggctgatgggaaaaggaaagaatgaagctcaccttccagat
gacaagaacaaatcaattgtttgggatgaacagaaacaacgctgggttaatctggatgaa
ccagaagaggagagtaagcctccgccaccacctccaacaggacttcctaaagttcctcag
actgttccacctggacctggaggcccacctagtgcccctgtcaacatgttctccagaaga
gcagccggaagcagagcccgttatgttgatgtcctgaatccaggtggaaccaagtcaagc
ggtgctgttcctgcaccatcagatctgtttgcccccttggcaccaatgccaattcctgca
aatgtatttgttccaaactcagttccgggggagccccagccaatggaagggagcagtgca
gcagagcacacaccagctgcaaatcaaaccaacacagatcctgctgcagctgtagaacca
gagtatttaaaccctgcaatccttcctcctggatctggacttcctgtttctaaccctgat
ggctcccaatcaggcgagctttcgcgctctagttcaatgagttcattatcacgtgaagta
agccagcattttaatcagcctgccactgtgccaccttcggggggaccttcagcaggaaca
gtaccgttctacaatccttctcagtttgcacaatctcctgcagccactggaagttcaagg
ttgggaagaattggacagagaaagtatccaacattgaagtag
DBGET
integrated database retrieval system
