Calonectris borealis (Cory's shearwater): 142091505
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Entry
142091505 CDS
T11211
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142091505 (GAPVD1)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
142091505 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
DUF5601
VPS9
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
142091505
NCBI-ProteinID:
XP_075026989
LinkDB
All DBs
Position
21:11910260..11957750
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AA seq
1569 aa
AA seq
DB search
MWACFRTKYEYCVTRSLPKMVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKL
YRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQEAAYGEFLN
RLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFEL
KESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNK
LIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLR
WIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNL
MQVGRLLQQLAMTGSEEGDPRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEG
LSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYN
TPQLSPATTPANKKNRLPIATRSRSRSNILMDQHGDHEGFSQETIPEVQPEEVLVISLGT
GPQITPGMMSENEVLNMQLADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSN
RSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGL
TDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDP
CTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPS
TPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQT
DSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAMGGNEARLPNFGSHTLIP
TDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEERELPMPTTNTGAAVL
VAASQSSSSSPSKDSSRGEIEDRKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQE
KDKDDMVPDRYSTLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDGAETIG
DGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPM
LTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRK
LLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLL
ESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIE
RSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQ
SEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKPFQLLR
RCLGMDAGSRTLGARVRSCCWGQRSRVQATSQLKSWWGIGNFPPVLDAASDLKTTAPASP
DAEREQFPNRAQALPNVKPSSSAGSAAQPAGSPDAPRGTCASPSAVPGTRSALHWRSHAG
PGGSAPAGC
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcatgctttaggacaaagtacgagtactgtgtaacccgctcactgcccaagatg
gtgaagctggatatacacacgctggctcatcacctcaagcaggaacgactgtatgtaaac
tcagaaaagcaacttattcaaaggctcaatgcagatgtattgaagacagctgaaaagctg
taccgcacagcatggatttccaagcagcaaaggattaacttggacagactgatcataaca
agtgctgaagcttctcctgctgaatgttgccagcatgctaaaatcttggaggacacgcag
tttgtggatggatataagcagttgggatttcaggaggctgcttacggggaattcctaaac
agattgagagagaaccctaggcttattgcatcctgtctggttgccggagagaagctcaac
caggacaacactcagagtgtcattcacacagtctttacctccatttatggcaattgcatc
atgcaggaggatgagagctacctcctccaggtcctccgttacttgattgaatttgaactc
aaggaaagcgacaacccgaggcggctgttgagacgaggcacctgtgcattcagcatctta
ttcaaacttttctctgaaggactcttttctgcaaaactttttcttactgcaactttacat
gagccaattatgcagcttctggttgaagatgaagaccacctggaaactgatccaaacaag
ttaattgagagattctccccagtacaacaggaaaagttatttggggaaaaaggcacagaa
aagttcaagcaaagagtccaagagatggttgactccaatgaggccaagctggtgaccttg
gtcaacaaattcattggctatctcaaacaaaatacttactgttttcctcacagcttgaga
tggattgtgtcacaaatgtacaaaacgctctcgtgtgtagacaggctggaggttggggag
gtcagagcaatgtgcacagatcttcttctagcgtgtttcatctgtcctgcaattgttaac
ccagaacagtatgggataatttctgatgctcctataaatgaggtggcaagatttaatctg
atgcaggttgggagacttctgcagcaattggcaatgacaggttctgaagagggagatcca
cgtatgaagagcaaccttgctaaatttgacaaaagctgtgttgccgctttcctggatgta
gttattgatgggcgtgcagttgaaactcctccaatgtcttctgttaatcttctggagggg
ttgagtagaacagtggtttacatgacatacagccagctaactactctggttggctttatg
cggaatgtaatgtcaagcgatcaacttaaggaagatcggatggctttggaaaacttgctg
gcaaacttaccccagaataaaccaggaaaaagcagcagccttgaaatgactccgtataat
accccacagctttctcctgcaactactccagctaacaaaaaaaatcgtttaccaatagca
actcgtagcagaagtagatcaaatattctaatggatcagcatggagatcatgaaggattc
tcccaggagactatcccagaagttcagccggaagaagtgctggtgatttctttggggaca
ggtccacagattaccccaggaatgatgtcagaaaatgaggtcttaaatatgcagcttgca
gatggtggacaaggagatgtcccagttgatgaaaacaaactccatggtaaacctgataaa
accttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttcaaat
cgctccaactctgtgtcatccttggatttagaaggggagtctgtgtcagagcttggcgcg
ggcccctctgggagcaatggtgttgaagctctgcagctgttagagcacgaacaagccaca
actcaggataatcttgatgacaagctccgtaaatttgaaatccgtgacatgatggggttg
actgatgacagagatatatcggaaactgtgagtgaaacttggagtacagatgtcttggga
agtgactttgatccaaatattgatgaagatcgtttgcaagaaatagcaggtgcagctgca
gagaacatgctaggcagcttgctgtgtttaccaggttcaggatccgtcttgcttgatccc
tgcacaggttcaaccatatcagaaaccacaagtgaggcctggagcgtggaagtattacca
agtgattcagaggccccagacttaaaacaggaggaaagactacaagaactggaaagctgt
tctgggctgggtagcacgtctgatgatacagatgtaagggaggtcagttctcgacccagt
acaccaggcctcagcgttgtatcaggtattagtgcaacatctgaagatattcctaataag
attgaggatctcaggtccgaatgtagctccgactttgggggaaaagattccgtgacaagt
cctgacatggatgaaacggcccacggagccagtcagttgacatctcctccttctcagaca
gattctttgcttgcactgtttgaccctctgtcgtcaaatgagggtgtatcagctgtagta
aggcctaaagtacactatgcaagaccctctcatccaccaccggatccaccaatcttggaa
ggagctatgggaggtaatgaggcccgattaccaaactttgggtctcacactttaattcca
actgatttagaagcatttaagcagaggcattcttatccagagaggctagtccgcagtagg
agttcagatatagtatcatcagttcggagacccatgagtgatcctgggtggaacagacgt
cctggtaatgaggagagggagcttcctatgccaaccaccaacactggagcagctgttctg
gtggctgcatctcagtcatcatcttcatctcccagtaaagactcctctaggggagagatt
gaagatcgaaaagacagtgatgatgagaagtctgacagaaacaagccctggtggaggaaa
cgttttgcgtctgccatgcccaaagctcctattccatttagaaagaaagaaaaacaagaa
aaagacaaagatgacatggtgcctgacagatactcaacacttcaagatgatcccagccca
agactcagtgcgcaggcgcaagctgcggaggacattctggacaaatacaggaatgcaatt
aagcgaaccagtcctagtgaaggagccatagtaaactatgacggtgcggagactattggg
gatggtgagagtatgcatgactctccacgtgatgaggctttgcaaaacatgtctgcagat
gatctcccagactctgcaagtcaagtagcacagccacaaagttctgctttctcctatagg
gatgcaaagaagaagttgagattggctctttgttcagcagattctgttgccttcccaatg
ttgacacattcaacaaggaacggtctaccagatcacacagaccctgaagataatgaaatt
gtgtgcttcttgaaagttcagctagctgaagctattaacctccaagacaaaaacttgatg
gcccagctgcaagagacaatgcgatgtgtaagccgctttgataacaggacctgtcgaaag
ctgctggcatctattgcagaggactacaggaaaagagctccatatatcgcttatttaact
cgatgtcgccaaggcctgcaaacgacacaagcgcacttggaaaggctgttacaaagagtt
ctgcgagataaagaagtggccaacagatacttcactacagtatgtgtgaggttgctgcta
gagagcaaagaaaagaaaataagggagtttattcaagatttccagaaactcacagcagca
gatgataaaacagcccaggttgaggattttcttcagttcttatatggggctatggctcag
gatgccatatggcagaatgccagtgaagaacagcttcaggatgcacaattagctatagaa
cgcagtgtgatgaatcgtattttcaaacttgcgttctaccctaatcaggatggagatatt
ctgcgtgaccaggtccttcatgagcacatacagaggttatctaaagtagtgactgcaaac
cacagagcacttcagatacctgaggtatatctgcgggaggcaccatggccatctgcacag
tctgaaatccgcacaataagcgcttataaaaccccccgagacaaagtacagtgtatcctg
cgaatgtgttcaaccatcatgaacctgcttagtctggcaaatgaagattcagtacctggg
gcagatgattttgttcctgttctggtctttgtcctcataaagccgtttcagctcctccgc
cgctgcctcgggatggacgctggctcacggacgctgggtgccagggtgcggagctgctgc
tgggggcagagaagccgagtccaggccacttcacagttaaagtcttggtggggaattggg
aattttcctcctgtgctggatgcagcctctgacctgaaaaccaccgccccagcctccccg
gatgcagagcgagagcagttccctaatagagcccaagcgctccccaatgtgaaaccctcc
tcttcagcggggagcgcagcccagcccgccggcagccccgacgctccccgcggtacgtgt
gcttctccatcggcagttcccgggacgagatccgcactccactggcgaagtcacgcagga
cccgggggcagcgcaccggctggctgctga
DBGET
integrated database retrieval system
