Calonectris borealis (Cory's shearwater): 142091804
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Entry
142091804 CDS
T11211
Symbol
CNTNAP1
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142091804 (CNTNAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbor04990
]
142091804 (CNTNAP1)
Domain-containing proteins not elsewhere classified [BR:
cbor04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
142091804 (CNTNAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
F5_F8_type_C_2
Laminin_G_3
Fibrinogen_C
Motif
Other DBs
NCBI-GeneID:
142091804
NCBI-ProteinID:
XP_075027259
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Position
22:10532234..10541168
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AA seq
1304 aa
AA seq
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MGARRLLGLLLAACAGLLRPGPGCLARPCYDELVAPLYSSSIGASSRYSIFYSASFARLH
STSGWSPDPRDKQPWLQIDLMQKHRINAVATQGTFNTYDWLTRYIVLYGDHPTSWKPFFQ
QGSNWTFFGNVNESGVVRHDLHYPILARYIRIIPVAWNPRGKIGLRLGLYGCPYRSHVLY
FDGDDAISYRFRAKRISTLEDDISFNFKTLEQDGVLMHGEGSQGDYITVELKQAQLLLHI
SLGSSPLHASEGHTTAAVGSLLDDQHWHSLHIERYGHHVNLTLDGEVKRFRCHGTFDQLD
LDTELFFGGVIDQDKQHLTYRQNFRGCVENILFNGVNIADLARHRRPNIRFEGSVGHYCQ
DQLNTPITFAGINNYVRVPGIPRRNRLAVSFRFRSWDTAGLLLYTSFADRLGSLEVVLSE
GQVNVSIAQPGKKKLEFAAGHRLNDGFWHSVQLVARDGSAVVTIDDDDGAEFRVAHPFQL
RTGSQYFFGGCPKPASVTGCRSNQTAFHGCLQMLNVDMQPVDVELLVQHRLGQYFNVLFN
VCGITDRCTPNLCEHDGRCIQSWDDFMCICDLTGYKGETCHKSLYKESCDAYRVSGKTSG
NYTIDPDGSGPLKPFTVYCDIREDRAWTIIRHNRYYATRVTGSSVDQPYLGAVEYWNASW
AEVSALANASEYCEQRIELRCYSSRLLNTPSGLPFSFWMGRHDERHYYWGGSRPGIQRCA
CGLDKNCADPKYFCNCDADHTLWRTDKGLLTFVDHLPVTQVVVGDTNRSGSEAQFMLGPL
RCYGDRNTWNTVSFNRGAALLFPTFQANHSLDISFYFKTTALSGVFLENPGSRNYIRVEL
NTTRDVVFAYDIGNGDENLTVRSAVPWNDDEWHQVKAELNVKLARLRVDKLPWVVRPAPP
QSFVRLDFDRPLYVGAAEHKMRPFLGCLRALRMNGVTLNLEGKANETEGVRVNCTGHCQD
PPVPCQNSGLCVERYSHYSCNCSISAFDGPFCNHDIGGYFEEGTWVRYNILPMSLYAARE
FASIVSSPWQPLPGYNLTSEEVSFSFSTTSAPAVLLYVSSFVKDYMAVLIKDDGSLQLRY
QLGTSPYVFALTTKPVTDGRPHRVNITRLHRTLYTQVDYLPVMEQQFSLFVDSKLDSPKN
LYLGRVMETGVIDPEIQRYNTPGFSGCLSGVKFNSLVPLKAIFRPTSVVRPYSIRGELVE
SSCASMLPLTTILIPPEMDPWYMGTEFPHVHDDGWIGIIIGFVTFLLLLLGGLLVLLYFY
YHRYKGSYHTNEPKAVQDYGSATKPLTVRKDQNLPQILEEAKGD
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctcgccgcctcctcgggctcctgctcgccgcctgcgccggcctcctgcgcccc
ggccccggctgcctcgcacggccctgctacgatgagcttgtcgctcccctctactcctcg
tccatcggtgcctcctccagatacagcatcttctactctgccagctttgcccggctgcac
agcaccagcggctggtcccccgacccccgggacaagcagccctggctccagattgacctg
atgcaaaagcaccggatcaatgcagtggccacacaggggaccttcaacacctacgactgg
ctgacgcgctacattgtgctctacggagaccaccccaccagctggaaacccttcttccag
cagggcagcaactggacgttctttgggaatgtgaatgaaagcggggtggtacggcacgac
ctgcactaccccatcctcgcgcgctacatccgcatcattccggtggcctggaacccacgc
gggaagatcgggctgcgtctgggcctctatggctgcccctaccggtcccatgtgctctac
tttgatggggatgatgccatctcctaccgcttccgggccaagaggatcagcaccctcgag
gatgacatctccttcaacttcaagacgctggagcaggacggggtgctgatgcacggggag
ggctcgcagggcgactacatcacggtggagctcaagcaggcccagctcctcctgcacatc
agcttaggcagcagcccactgcacgccagcgagggccacacgacagcggcggtgggcagc
ctcctggatgaccagcactggcactcgctgcacattgagcgctacggccaccatgtcaat
ctgacgctggacggggaggtcaagcgtttccgctgccacggcaccttcgaccagctcgac
ctcgacaccgagctcttcttcgggggggtgatcgaccaggacaagcagcacctcacctac
cggcaaaacttccggggctgcgtggagaacatcctcttcaatggggtcaacatcgccgac
ctggcccggcaccggagacccaacatccgctttgagggcagcgtgggccactattgccag
gaccagctgaacacccccatcacctttgccggcatcaacaactatgtgcgggtgccaggg
atcccacggaggaaccgcctggccgtcagcttccgcttccgctcctgggacactgccggg
ctcctgctctacaccagcttcgccgaccgcctgggctccctcgaggtggtgttgagcgag
gggcaggtcaacgtctccatcgctcagcctggcaagaagaagctggagtttgccgcaggg
catcgcctgaacgacggcttctggcactcggtgcagctggtggcgcgggacggctcggcc
gtggtgaccatcgatgatgacgacggcgctgagtttcgggtggcgcaccccttccagctc
cgcaccggcagccagtacttcttcggaggctgccccaagccggcctcggtcactggctgc
cggtcgaaccagacagccttccacggctgcctgcagatgctgaacgtggacatgcagccc
gtggatgtggagctgctggtgcagcaccggctggggcagtacttcaacgtgctcttcaat
gtctgcggcatcacggacaggtgcacccccaacctgtgcgagcatgacggccgctgcatc
cagtcctgggacgatttcatgtgcatctgtgacctgacggggtacaagggggagacctgc
cacaaatccctttataaggagtcatgcgatgcttaccgggtcagtgggaaaacctcgggg
aactacaccattgacccggatggcagcgggccgctcaagcccttcacggtgtactgcgac
atccgagaggaccgggcatggaccatcatccggcacaaccgctactatgccacgcgggtg
acaggctccagcgtggaccagccctacttgggggctgtggagtactggaatgcctcctgg
gctgaggtctcagcgctggcgaatgcctctgagtactgcgagcagcgcattgagctccgc
tgctacagctcccgcctgctcaacaccccctccggactgcccttcagcttctggatgggc
cgacacgacgagcggcactactactgggggggctcgcggccgggcatccagcgctgcgcc
tgtgggttggacaagaactgcgccgaccccaagtacttctgcaactgtgacgccgaccac
acgctgtggaggacggacaagggtctgctgacctttgtggaccacctgcccgtcacccag
gttgtggtcggagacacaaaccgctccggctccgaagcccagttcatgttgggccccctg
cggtgctacggagatcgcaacacctggaacaccgtctccttcaacaggggcgcagccctg
ctcttccccaccttccaggccaaccacagcctcgatatctccttctacttcaagaccacc
gccctgtctggcgtcttcctggagaaccctggctcccgaaactacatccgcgtcgagctc
aacaccaccagggacgtggtgtttgcctacgacatcgggaatggggatgagaacctgacg
gtgcggtcagcggtgccctggaatgacgacgagtggcaccaggtgaaggctgagctcaac
gtcaagctggcgcggctgcgggtggacaagctgccctgggtggtgcggccagccccgccc
cagagcttcgtccgcctggacttcgacaggcccctctacgtcggtgcggcagagcacaag
atgcgcccgttcctggggtgcctgcgggcactgcgaatgaacggggtgacgctcaacctg
gagggcaaggccaacgagacagagggcgtgcgggtcaactgcaccggccactgccaggac
ccgccggtgccctgccagaacagtgggctctgcgtcgagcgctacagccactacagctgc
aactgcagcatctccgccttcgatgggcccttctgcaaccatgacattggcgggtacttc
gaggagggcacatgggtgcggtacaacatcctgcccatgtcactgtacgccgcccgcgag
ttcgccagcatcgtcagcagcccctggcagcccctgcccggctacaacctcaccagcgag
gaggtcagcttcagcttcagcaccacctcggcgcccgccgtgctgctctacgtcagctcc
ttcgtcaaggactacatggccgtgctcatcaaggatgatgggagcctgcagctgcgctac
cagctgggcaccagcccctacgtctttgctctcaccaccaagccagtgacagatgggagg
cctcaccgtgtcaacatcacccgcctgcaccgtacgctgtacacccaggtggactatctc
cctgtcatggagcagcagttctccctgtttgtggacagcaagctggactcgcccaaaaac
ctttacctggggcgcgtgatggagactggcgtgattgaccccgagatccagcgctacaac
acgcccggcttctcaggctgcctctcgggggtgaagttcaacagcctcgtccccctcaaa
gccatcttccgccccaccagtgtcgtgcggccctacagcatccggggggagctggtggag
tcgagctgcgcctccatgcttcccctcaccaccatcctcatccctcctgagatggacccc
tggtacatgggcacagagttcccccacgtgcatgatgatggctggatcgggatcatcatt
gggttcgtgaccttcctgctcctgctgctcggggggctgctggtgctgctgtacttctac
tatcaccgctacaagggctcctaccacaccaatgagcccaaggccgtccaggactatggc
agcgccaccaaaccgctgacagtgcgcaaggaccagaacctgccccagatcctggaggag
gcaaaaggggactag
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