Calonectris borealis (Cory's shearwater): 142091836
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Entry
142091836 CDS
T11211
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00562
Inositol phosphate metabolism
cbor01100
Metabolic pathways
cbor04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
142091836 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
142091836 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142091836 (SYNJ1)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
142091836 (SYNJ1)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
142091836 (SYNJ1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
142091836
NCBI-ProteinID:
XP_075027332
LinkDB
All DBs
Position
1
Genome browser
AA seq
1587 aa
AA seq
DB search
MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAY
GLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRISEVR
KVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVN
LLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLE
CGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTR
FQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCV
GTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNA
GNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLGFPMGR
MLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGK
INFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHGDSNV
PYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAVQGPPDGTVM
VSIRSSSAEENYFDDNLIDDLLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGT
ELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDD
YSAEVEEILPQHLQPTSSSGLGTSPSSSPRSSPCQSPTLSDGPTLPVRPSRAPTKTPGPP
VSSHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFG
GLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPSTGISSAGTAGYGTTRPTVPPRAG
VISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQPTTQPPPMLRMQE
PLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNS
DPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQGNADVLNTVSCMPAMPPIPT
FNTSQEHMRSSPNPFITGLNCTNPFTERTPNDGNPFRTETQESEITSHLLEGRAACNPFP
SLNPPSCNTSKPVFSVDASENTFCLRSKSLLVKNVQPKGWVTFDDEEEDFNVKLKPSKSV
PDFKQISSRKSAGSPDLLGTEQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSR
ITSNRSPTDPFTSLAPKVSPTQDFTER
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagtaaaggataccgtgtctatcacaagctggatccacttccattcagtgtg
atagtggaaaccagaaacagagaagaatgtctcatgtttgaatccggagctgtggctgtc
ctctcttctgcagaaaaagacacgatcaagaatacttactccaaagtaatggatgcatat
gggctcttgggtgtattaagattaaaccttggagacacattgttacattatctggttcta
gtaacaggatgcatgtctgtgggaaagattcaagactctgaagtttttcgagttacttcc
actgaatttgtatccttacgaattgattcaacagatgaggatcgtatttcagaagtgcgc
aaagttttgaactcgggaaacttttattttgcatggtctgcaactggtgtcagtttagat
cttagtctcaacgctcaccgcagcatgcaggagcacaccactgacaataggtttttctgg
aaccagtcactgcatttacatctgaagcactatggtgtgaactgtgatgactggttgtta
cgtctcatgtgtggaggagtggagataaggacaatttatgcggctcacaagcaggcaaag
gcttgtctcatttcacgactaagctgtgaacgggctggcacaagatttaacgtccgggga
acaaacgatgatggtcatgttgctaattttgttgaaacagagcaggtgatatttttagat
gactctgtgtcatcttttatacagattcgaggatctgttccattattttgggaacagcca
ggcctgcaggtgggatcccatcgtgtcagaatgtcaaggggttttgaggcgaatgcacca
gcttttgacaggcatttccaaactcttaaaaatttatatggcaagcaaattattgtaaat
ttacttggggcaaaagaaggggagcacatgctcagcaaagcttttcagagccatttgaaa
gcatctgaacattcagctgatatcaaaatggtgaactttgactatcatcaaatggttaaa
ggtggaaaggcagaaaaactacacagtgtgcttaaacctcaagtccagaaattcttagag
tgtggatttttttattttgatggaaaggaagttaagagatctcaaagcggtactgtcaga
acaaactgcttggactgtctggatagaacaaacagcgtgcaggctttctttggcttagag
atgctaacaaaacaactggaggtattaggattagctgagaagcctcagttggttactcgc
tttcaggaagttttccgatccatgtggtctgtgaatggtgattctgtcagtaaaatttat
gctggaactggagcccttgaaggaaaagctaaggctggaaagctgaaggatggtgctcgt
tctgtgaccagaacgattcaaaataacttttttgatagctccaagcaggaggccattgat
gttttgttattgggaaataccctaaatagtgatttagcagataaagcacgggctctctta
accaccagcagtttacgcgtttcagagcaatcattacaatcagcatctgtaaaagtgcta
aagagtatgtgtgaaaacttttataagtatgcaaaaccgaaaaaaattagagtctgcgtt
gggacgtggaatgtcaacggggggaagcagtttcgaagtattgcctttagaaatcagact
ctcactgattggcttctagatgcaccaaagttagctggtattcatgaattccaagatcgc
aaaagcaagcctgtagacatatttgccattggatttgaagaaatggtggagttaaatgca
ggaaacattgtgaatgccagcacaaccaatcagaagctctgggctgctgaactgcagaag
actatctcaagagattacaagtatgtgctgctggcttctgagcagttggtgggcgtctgt
ctttttgtgttcatcaggccccagcatgctccttttatcagggatgttgctgttgatact
gtaaagactggcatgggaggagccactggtaataaaggtgcagtagcaattcggatgttg
tttcatacatccagtctttgctttgtctgcagtcattttgctgcagggcaatcacaagtt
aaagagagaaatgaagacttcgtagaaatagctcgcaagctcggtttcccaatgggaagg
atgctcttttcccatgactatattttttggtgtggtgactttaattatcgaatagatatt
ccaaatgaggaggttaaggacctaatacgacaacagaactgggatccccttatagcagga
gaccaacttatcaatcagaaaaattctggacagatttttaggggatttttggaagggaaa
ataaattttgctcctacatacaaatatgatctgttttctgatgactatgacaccagtgaa
aaatgtcgcacaccggcatggacagatcgtattctttggagaagaagaaaatggcctttt
gaccgatcagctgaagacctggatcttctgaatgctagttttcacggtgacagtaatgtt
ccttatacatggaatcctggtactttgttgcactacggaagagcagagctgaaaacatct
gatcataggcctgtggttgcactgattgacattgacatatttgaaattgaagcagaagag
agacaaaaagtttataaggaggtgatcgcagtgcaaggaccacctgatggtactgtaatg
gtctccatcagaagttcttcagcagaagaaaactattttgatgataacttgattgatgac
cttcttcaaaaatttgcaagctatggtgaagttatacttataaggttcgtggaagacaag
atgtgggtaacatttttggaaggaagctctgctttgaatgttatgaatttgaatggtact
gagctactaggaaggattataaacataagcttgaaaaatccagattggatcagaagtttg
gaagatgaaatgaatctagagaaaattaatattgggctgccttcatcaacaagctctact
ttgctttgtgaagatgctgaggttactgcagactatgatatggaaggagacattgatgac
tatagtgctgaagtagaagaaatccttcctcagcatctacagccaacttcaagctctggt
cttggaacctccccaagctcttcaccgcgttccagtccctgtcagtcccctacgctgtca
gatggacctacgctcccagtgagaccgagccgagcgccaacaaaaactcctggaccacct
gtttcctcacacactgaatttcagctcggtacccagcagaaagagtcttctcagagcttg
gagcctaagcgtcctccaccacctcgccccgttgctcctcctgcacgccccgctccaccg
cagaggccgcctccaccatcaggcggtaggagtcctgcacctgctagaaaagaatttgga
ggtcttggagctcctcccagtcctggggtagctaggagagaagtagaagcacaaaaaagt
cctggaacacaaagaaaagataacttagttcgtaatcagcctccaccttcaactggaatt
tcaagcgcaggaactgctggatatggtacaaccagaccgactgttccacctcgagctgga
gttattagtgcaccacaaagccatgtccgtccctctgggggaagaccagcacctgaaact
caaaccaaaccagctgaaccaccaaggggctcaccattgcttcctgaaccactaaagcct
caggctgctggacctgctcagcccaccactcagccaccgcctatgttaaggatgcaggag
cctctgatacctgtggcatcgcatccatctcagacaagtgccccacaaagtctggaaccc
ccacaaccgcctcctcgtagccgatcatctcacagtttgccttctgaatctgctccttca
cagcagcaaattaaaacaaatggaacgtatggcactaaacttgaaacacagttaaacagt
gacccttttgaagatttgtcatttaagctgcttgtgtcaaagatgcagacgtctgttcga
acatcacctgttccgactttaaaccaaaaggagttgatacagttgccttcagcaacacaa
ggaaatgctgatgttttgaatactgtaagttgcatgccagcaatgcctcctattccaacc
tttaacacatcccaggaacatatgcgcagctctccaaatccatttattactggactgaac
tgcacaaatccattcactgaaagaactcctaatgatggaaacccatttagaacggaaacg
caagagtctgaaataacttcacatttactagaaggacgtgctgcttgcaatcctttccct
tctctaaatccccccagctgtaatacaagcaagcctgtattttctgttgatgcatctgaa
aacactttttgcttgcgaagtaaatctctcctggtaaaaaatgtacagccaaaaggatgg
gtaacgtttgatgatgaggaggaggatttcaatgtaaagctaaagccatctaaaagtgtt
ccagattttaagcaaatcagttccaggaagtcagctggatctccagatttgctgggcact
gaacaaaatacttttcttggttcagactttaactttgataatgactggaataaaagttct
actgattgcttctatacaatgccagcaagaagaccacctgcacctcctataccatcaaga
ataaccagcaacagatcccccacagatcctttcacttctttggcacctaaggtgtcacca
acacaagattttacagaaagatag
DBGET
integrated database retrieval system
