Calonectris borealis (Cory's shearwater): 142091875
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Entry
142091875 CDS
T11211
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
142091875 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142091875 (HDAC5)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
142091875 (HDAC5)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
142091875 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
142091875
NCBI-ProteinID:
XP_075027481
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All DBs
Position
22:7563037..7587221
Genome browser
AA seq
1133 aa
AA seq
DB search
MDPQSDAEGGSGHEPSLELLSHAQLHAALPTPGAEGPAEAPEACGERRGPGLDAAARERQ
LQRELLALKQQQQLQKQLLFAEFQKQHEHLTRQHEVQLQKHLKQQQEALAARRQQELEQQ
RQRERQEALEQQQRLEQLHALRTKDKSRESAIASTEVKLKLQEFLLSKTKEPGTGPPNHS
LPQHPKCCGVSAAFAPPPRAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTYDGRDDFPLRK
TASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEITVSSVCSSAPGSGPSS
PNSSHSAIAENGFTGSVPNIHAEQLLPQPRALTLDGASQLSLYTSPSLPNISLGLQATVT
VTNSHLNASPKLSPQAEAERPAVAALRPGAALTGKFLSTSSIPGCLLGVALEGDPPAGPA
SLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERAGNARPVSKLPRHRPLSRTQSSPLPQ
SPQALPHGALPHGALPHGALQHHFLDKQQVQLGKLLPKPGELARQPPTHPEETEEELTEQ
QSPPPGDGVPPGPPLASPDAGDPPEQLQDPEGCGVPHEEPGDSGDEAETPGVPDVTELGV
TYKQMFPEAPLQLYPAPTLGILALPHPALARTQSSPASAGVKPPAPDGPPKHLFTTAPMH
LRQHQRPPRARRAHPEHLVPAAGDRAPRQVRAHPGQEGDAGGNPDGAFGASHLALRHQPP
QPPEARQQKAPGSHQPEDVRGAAVRGHRGGQRHGVERDAFIQRRAHGGGVPGGARLQGGR
RRDQERLRRHPPPGTPRRGVHGHGLLFLQLGGHLGQTAPAEAQRGQDPHRGLGHPPRERH
PTSLLQRPRRPLHLPPPLRRWQLLPGQRGARGGRQRDGSGLQHQHRLDRRRRPPHRGRGV
SHCLQDRGDAHRQRVLPGRGAGLGRLRRRRGSPLPARRLLRHRQMFRPLDEAADDAGGGA
GGAGAGGGARPDGHLRRLGGLRLRSARPGVGAPGSVPPAAEAKRERGGHPGEGHRDPEQA
LGLGEAPGGGRGLLLAGGAEGGGGGSRDGDGHGPALGGRRAGGRRPPAQAGGGADGGRAR
AVTRRPPGPSPRFFPFPKKKETPRREEKTTATHTQITLKKQKKKPKQKNKKTP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagagcgacgcagagggggggtccggccacgagccctcgctggagctcctg
tcccacgcccagctccacgccgccctccccaccccaggggcggaggggccggcggaggcg
cccgaggcgtgcggggagcgccgggggccggggctggacgcggcggcgcgggagcggcag
ctgcagcgggagctgctggccctcaagcagcagcagcagctccagaagcagctgctcttc
gccgagttccagaagcagcacgagcacctcacccgccagcacgaggtccagctccagaag
cacctcaagcagcagcaggaggcgctggccgcccgccggcagcaggagctggagcagcag
cggcagcgggagcggcaggaggccctggagcagcagcagcgcctggagcagctccacgcc
ctgcgcaccaaggacaagagccgcgagagcgccatcgccagcacggaggtgaagctgaag
ctgcaggagttcctgctcagcaagacgaaggagccgggcaccggcccccccaaccattcc
ctcccccagcaccctaaatgttgcggggtctctgccgccttcgcccccccccccagggct
caccacacctcgttggaccagagttcccccccccagaccggcagcccggggacaccccca
tcctacaaactcccccttctcggcacctacgacggccgggatgatttcccactccgcaaa
accgcctccgaacccaacctgaaagtgcgctcgcggttaaaacagaaggtagcggagagg
aggagcagccccctgctgcggaggaaggacggcaccgtcatcagcaccttcaagaagcga
gccatcgagatcacggtgtcctcggtgtgcagcagcgccccgggctccgggcccagctcc
cccaacagctcccacagcgccatcgccgagaacggcttcaccggctccgtccccaacatc
cacgccgagcagctcctgccccagccccgagccctcaccctggacggcgccagccagctc
agcctctacacgtccccgtccctgcccaacatctccctggggctgcaggccaccgtcacc
gtcaccaactcccacctcaacgcgtcccccaagctgtcaccgcaggcggaagccgagcgc
ccggcggtggccgccctgcgccccggggccgccctcaccggcaaattcctgagcacctcc
tccatccccggctgcctgctgggggtggccctggagggggacccccccgccggccccgcg
tccctgctgcagcacgtcctgctgctggagcaagcgcgccagcagagcaccctcatcgcc
gtgccgctgcacgggcaatcgccgctggtgacgggggagcgcgcggggaacgcgcggccg
gtgagcaagctgccgcgccaccggcctctgagccgcacccagtcgtccccgctgcctcag
agcccccaggccctgccccacggcgccctgccccacggcgccctgccccacggcgccctc
cagcaccacttcctcgacaagcagcaggtccaactgggcaagctgctccccaagccgggg
gagctggcgcggcagccccccacccaccccgaggagacggaggaggagctgacggagcag
cagtcgccccccccgggtgatggggtcccccccggcccccccctcgcctccccagacgct
ggggaccccccagagcagctgcaggaccccgagggctgcggggtgccccacgaggagccg
ggtgacagcggggacgaggctgagacccccggggtccccgatgtcaccgagctgggggtc
acgtacaagcagatgttccctgaggcgccgctgcagctgtaccccgcccccaccctgggc
atcctggcgctgccccacccggccctcgcccgcacccagtcgtcccccgccagcgccggc
gtcaagccccccgcgcccgacgggccccccaagcacctcttcaccacagcaccaatgcac
ctgcggcaacaccaacgtccaccccgagcacgccgggcgcatccagagcatctggtcccg
gctgcaggagaccgggctcctcggcaagtgcgagcgcatccggggcaggaaggcgacgct
ggaggaaatccagacggtgcattcggagcatcacaccttgctctacggcaccagccccct
caaccgccagaagctcgacagcaaaaagctcctgggtcccatcagccagaagacgtacgc
ggtgctgccgtgcgggggcatcggggtggacagcgacacggtgtggaacgagatgcattc
atccagcgccgtgcgcatggcggtggggtgcctggtggagctcgccttcaaggtggccgc
cggcgagatcaagaacggcttcgccgtcatccgccccccgggacaccacgccgaggagtc
cacggccatgggcttctgtttcttcaactcggtggccatctcggccaaactgctccagca
gaagctcagcgtgggcaggatcctcatcgtggactgggacatccaccacgggaacggcac
ccaacaagccttctacagcgaccccgacgtcctctacatctccctccaccgctacgacga
tggcaacttcttcccgggcagcggggcgcccgaggaggtcggcagcgggatgggagtggg
ctacaacatcaacatcgcctggaccggcggcgtcgacccccccatcggggacgtggagta
tctcactgccttcaggaccgtggtgatgcccatcgccaacgagttctccccggacgtggt
gctggtctcggccggcttcgacgccgtcgagggtcacctctccccgctcggcggctactc
cgtcaccgccaaatgtttcggccacttgacgaagcagctgatgatgctggcgggggggcg
ggtggtgctggcgctggagggggggcacgacctgacggccatctgcgacgcctcggaggc
ctgcgtctccgctctgctcggcctggagttggagcccctggatccgtccctcctgcagca
gaagccaaacgtgaacgcggtggccaccctggagaaggtcatcgagatccagagcaagca
ctggggctcggtgaagcgcctggcggcgggcgtgggctgctccttgctggaggcgcagaa
gggggaggcggaggaagccgagacggtgacggccatggccctgctctcggtgggcgccga
gcaggggggcgcagacccccagcccaggccggcggaggagccgatggaggccgagcccgc
gctgtgacgcgccgaccccccggcccctcgccgagattttttccgtttccgaaaaagaaa
gaaacaccgagaagagaagaaaaaaccacagccacacacacgcaaatcacgttaaaaaaa
caaaaaaaaaaaccaaaacaaaaaaacaaaaaaacaccttaa
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