KEGG   Calonectris borealis (Cory's shearwater): 142092002
Entry
142092002         CDS       T11211                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor04137  Mitophagy - animal
cbor04144  Endocytosis
cbor04145  Phagosome
cbor04148  Efferocytosis
cbor05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142092002 (RAB5C)
   04145 Phagosome
    142092002 (RAB5C)
   04137 Mitophagy - animal
    142092002 (RAB5C)
   04148 Efferocytosis
    142092002 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    142092002 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbor04131]
    142092002 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbor04147]
    142092002 (RAB5C)
   04031 GTP-binding proteins [BR:cbor04031]
    142092002 (RAB5C)
Membrane trafficking [BR:cbor04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    142092002 (RAB5C)
 Endosome - Lysosome transport
    142092002 (RAB5C)
Exosome [BR:cbor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142092002 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   142092002 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   142092002 (RAB5C)
  Exosomal proteins of bladder cancer cells
   142092002 (RAB5C)
GTP-binding proteins [BR:cbor04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    142092002 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 142092002
NCBI-ProteinID: XP_075027777
LinkDB
Position
22:complement(10323108..10337348)
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgctcgaccgaatggaccagccgctggaaacaaaatctgc
cagtttaaacttgttctcttgggagagtcggcagtggggaagtccagcctcgttctgcgc
ttcgtgaaggggcagttccacgagtaccaggagagcacgattggagctgccttcctaaca
cagacagtctgtctggatgacacaacggtgaagtttgaaatatgggatacagcaggacaa
gagcggtatcacagcctggcaccgatgtattaccgaggtgcccaggcagccattgttgtc
tacgacatcactaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
cggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctacc
aagagagctgtggacttccaggatgcacaaacatacgcagatgacaacagcttgctgttc
atggagacgtcggcaaagacagcgatgaatgtgaacgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggtaggaatcgggtggtt
gaccttcaggagagcagtcagcctagcaggagccagtgttgcagcaattga

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