Calonectris borealis (Cory's shearwater): 142092320
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Entry
142092320 CDS
T11211
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbor03037
]
142092320 (NPHP4)
Cilium and associated proteins [BR:
cbor03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
142092320 (NPHP4)
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GFIT
Other DBs
NCBI-GeneID:
142092320
NCBI-ProteinID:
XP_075028274
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Position
23:763904..787374
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AA seq
1415 aa
AA seq
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MSEWERVFLQNLALPPPCQRRRARPPGSTAFRCVLKHLEGAALAQGAEYQLRLSLFDATY
HHFFGRTWRSSQRAACAAPPCPARAAFNETVYFHTSLNHPGIAAVVEVVASAGKGDRGSR
HLSCGFGLIPLFGSGSEATDLATEDRALKLYHGTPRALLHPRFQDPMEKNKYLTVMEKSH
LQYTLKPHQPLETIFHLLPENILMSGLQTVPGLLPAHRNAGDCLQKPRLMKPVTCYLERL
SVQLYPSLEEFEEELLDLLNSDRLLKGGKLNHPVPPRCPSWKTCLSQANAAPDGNGVMVR
ERRLHVGVHNGLRFVQVPQVAVLVPEAEAARGSCLGVPGSGARVAGQALVLRSRIHLSEM
VLHPAFGVCFQLEYVICASGRADGKALPGSAHGEVADMRSVRWAVWSPVLGAGEAEVVLP
LRGGARRGPCQTLVYRTPLSSRSSRQGKHVESGTVQFHVSTDSEEHLVTAAEILCKDRDE
LEKPPTPSLSLPAPPRMAASPRGLGLSVSQLSAPPRGRGQPLAQRGRGSRQEGGITHLEA
DVGLPDPEPCAGDQLQALPFTPLQVPIAAVGLQAGSSRTLLSRASLARLHAAGFPEILDR
NQEPVEISEPLDPASFSPQLEEADLLQGNEIILQFLAFGRDARDGAEGMWPRTIFLTFQF
YRFPPVTTPRLQLVSTDGGPAAGPAMPVQLLVRVNKDGTLGTGPPGLQLKYMVDPAFLRA
GEQRWFVRYLAEHSLQIDVWDGDSLLLVGSAAVKLEPLLRQGRAAVRTHHELEVATTEYE
PDVTVMGREALRHGALRPLGVRVAVRGRLHLCLANIGHPCEETPGQLPAPLPSRSRLVPA
PDGTSSILGGSWFSLNAAGGGRVSRARRLAEVDGELAAALHSRRPEGRLAPPAAPSEAAA
ARRRKLRRMALVRQQEHAGGERTPQLSGWQEQRARHMRDLQIIDAYREHMKGESISRMLS
QAITATHTVHAVLGTAQFFEFTLKNPYGVQHTVTIEVDHPELSVVLDPREWRHFKELTKS
VTPVEEEMFHLRDDLRPQVYLRPNETVRIPFKYQTFSADPAVVTAQGPAGLGAGANAAAR
SLGKSGAGRTKHIQVSFEVSGGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLP
PWHTLPGAPVGMPGGEPEMFVRCSDPDIICETKNMGPGEPQDIFLKVAGGPSPQIKKFFV
AIYTDAWLAAPVQIWQFYLHSLQRLDVSCTAGQLARLSLLLRGTPAPRRVRAFTSHPQEL
EVDPDGPFLLPANGIQDLYIGVRPRRAGSRFIYLNLVDVESHQLVSSWLLCLSCRQPLIS
KAFEISLPAGGGRGCNKRITYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVYTIGL
RFAPSQGAGEEEILIHINDHEDKNEETFCVKVLYR
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtgggagcgggtgtttctgcagaacctcgcccttcctccgccctgccagcgg
aggcgggctcgcccgccgggctccacggctttccgctgcgtcctgaagcacctggaaggg
gctgccctcgcccagggagccgagtaccagctgcgcctctcccttttcgacgccacctac
caccacttctttgggaggacgtggaggagcagccagcgagctgcctgtgctgccccaccg
tgcccagccagggcggctttcaatgagaccgtttacttccacacctctttgaaccacccc
ggcatcgctgctgttgtggaagtggtggcgtcggctgggaaaggggacaggggctctcgg
catctctcctgcggctttggactcatccccctcttcggcagtgggtcggaggcgacggac
ctggccaccgaggacagagcgctgaagctgtatcatgggacaccgcgtgccttactgcac
ccgcgcttccaggaccccatggaaaagaacaaatacctgacggtgatggagaagagccac
ctgcagtacaccttgaagccccaccagcccttggagacgatatttcacctccttcccgaa
aacattctgatgtctgggctgcagaccgttcccggcttgctgccggcgcatagaaacgcg
ggtgactgtttgcagaaaccccggctgatgaagccggtcacctgctatctggagagactg
tctgtccagctgtacccttccttggaggagtttgaggaagaactgctggacttactgaac
agcgatcgcttacttaagggagggaagttaaaccaccccgtgccgcctcgctgcccgagc
tggaaaacttgcctgtcacaggctaatgctgcgccggacggcaacggggtgatggttcgg
gagcggcggctgcatgtcggcgtccacaacggcctgcgcttcgtccaggtgccgcaggtg
gctgtgctggtgccagaggcagaggcggcgcggggcagctgcctgggggtgccgggctct
ggagccagggttgcgggtcaagccctggtcctgaggagccgcatccacctgagcgaaatg
gtccttcacccggcgtttggggtttgcttccagctggagtacgtcatctgcgcctcgggg
agagccgatgggaaggccctgcccggcagcgcccacggcgaggtggccgatatgcgctcg
gtgcgctgggctgtctggagccccgtcctgggcgccggcgaggcggaggtggtcctgccc
ctgcgcggcggcgcccgccgcggcccctgccaaaccttggtctaccggaccccgctgagc
agcaggagctcccgccaggggaagcacgtggagtctgggactgtccaattccacgtttcc
actgattcagaagaacatcttgtaactgctgcagagatcctatgtaaagacagggacgag
ttggagaagcctcctacgccgtcgctgagtctgccggccccgccgcgaatggcagcctcc
ccacggggactggggctgtcggtgtcccagctgtcggccccgccgcggggcaggggccag
cccctggcgcagcgtggccgcggctctcggcaggagggggggatcactcacctggaggcc
gacgtcggcttgccagacccggagccctgcgccggagaccagctgcaggcgctgcccttc
accccgctgcaggtgcccatcgctgccgtggggctgcaggcaggcagttcccgcacgctg
ctctcccgtgcctcgctggcgcgcctgcatgccgctggcttcccagagatcctggaccgc
aaccaggagccagtggaaatctcggagccgttggacccagcaagtttcagcccgcagctg
gaggaagccgaccttctgcaaggcaatgaaataatcctgcagttcctggcttttggcagg
gatgcccgggatggcgcggaggggatgtggccgaggaccatcttcctcaccttccagttc
taccgtttcccgccggtcaccacgccgcggctgcagctggtcagcacggacggggggccg
gcggccgggccggctatgccggtgcagctcctcgtccgggtgaacaaggatgggaccctt
ggcaccgggccgccgggcttgcagctaaaatacatggtggatcccgctttcctgcgagct
ggggagcagcgctggtttgtgcggtacctggccgagcacagcctccagattgacgtctgg
gatggagactccctgctccttgttgggtccgctgctgtgaaactggagcccctgctgcgc
cagggccgggcagccgtcaggacccaccacgagctggaggtcgccacgactgagtacgag
ccggacgtgacggtgatgggccgggaggcgctgcggcacggcgccctgcggcccctcggc
gtccgcgtggcagtgaggggccgcctccacctctgcctggccaacatcggccacccatgc
gaggagaccccggggcagctgccggccccgctgccatcccgctcccgcctcgtgcccgca
ccggacggcaccagcagcatcctgggcggcagctggttctccctgaacgctgccggcggc
gggcgggtgtcgcgggcgcggaggctggccgaggtggacggcgagctggcagccgcgctg
cacagccgccggccagaggggaggctggcccccccagctgcgcccagcgaggccgcggct
gcccgtcggcgcaagctgcggcgcatggcgctggtgcgtcagcaggagcacgctggcggc
gagaggacgccccagctctcgggctggcaggagcagcgtgcccggcacatgcgggacctg
cagatcatcgacgcctatcgggagcacatgaagggcgagagcatctcccggatgctcagc
caggccatcaccgccacccacaccgtgcacgccgtgctggggacggcccagttcttcgag
ttcaccctgaagaacccctacggcgtccagcacaccgtgaccatcgaagtcgaccacccc
gagctcagtgtcgtactggacccgagagagtggcgccacttcaaggagctgaccaagagc
gttacgccggtggaggaggagatgttccacctccgtgatgacctcaggcctcaggtctac
ctgcgccccaacgagaccgtccgcatccccttcaaatatcagaccttctctgcagacccc
gcagttgtcacggcgcaggggccggcagggctgggcgccggtgccaacgcggccgcccgc
tccctggggaagagcggggccgggcggacaaagcacatccaggtctcctttgaggtgagc
ggggggaagcccatcgcactcctgcgggtgaaggtggagccgcagccccacgtggtggac
cagaccttccgcttctaccacccggagctcaccttcctgaagaagaccattcggctgccc
ccctggcacaccctccccggcgcgccggtggggatgccggggggggagcccgagatgttt
gttcgctgcagcgaccctgacatcatttgtgaaaccaaaaatatggggcctggggagccg
caggacatcttcttaaaagtagccggaggaccaagcccgcagatcaaaaagttctttgtt
gctatttatacggacgcctggctggcggcgcccgtccagatctggcagttctacctgcac
tcgctgcagcgcctggacgtcagctgcacagccgggcagctcgcccgcctctccctgctg
ctgcggggcaccccggccccgcggagggtgcgggcgttcacctcccacccccaggagctg
gaggtggatccggacggacccttcctcctccctgccaacggcatccaggacctgtacatt
ggcgtgaggcctcggcgggctggcagcaggttcatctacctcaacctggtggacgtggag
tcccaccagctggtgtcctcctggctgctctgcctgtcctgcaggcagcccctcatctcc
aaggcgttcgagatctcgctccccgcgggaggcgggagaggctgcaacaagcgcatcacc
tacaccaacccctacccctcgcccaggctctacttcttgtgcaccaaccggcccgacctc
ctgcagttcaaggaggactccttcgaggtcgccggcggggaggtgtacaccatcggcttg
cgcttcgccccgagccagggcgcgggtgaggaggagatcctgattcacatcaacgaccac
gaggacaagaacgaggaaaccttctgtgtgaaggtcctctaccggtga
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