Calonectris borealis (Cory's shearwater): 142092343
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Entry
142092343 CDS
T11211
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
142092343 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142092343 (RUNX1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
142092343 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
142092343
NCBI-ProteinID:
XP_075028318
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All DBs
Position
1:complement(118009678..118183889)
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AA seq
482 aa
AA seq
DB search
MNHGQFGMSSLSWTMYLMRKTRAATGFFDTSTSRRFTPPSTTLSPGKMTEPLPLPGAEHS
GALPGKLRSADRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDV
PDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPP
QVATYHRAIKITVDGPREPRRHRQKIDEQTKPGSLSFSERLSELEQLRRTAMRVSPHHPA
PTPNPRASLNHTTAFNPQPQSQIQDTRQVQPSPPWSYDQSYQYLGSIATPSVHPATPISP
GRASGMTSLTAELSSRLSSASDLTAFSDPRVGIDRSFSALPSISDPRMHYPGAFTYTPTP
VSSGIGIGMSAMSTATRYHTYLPPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFSMI
SGGDRSPPRIHPPCTNASTGSTLLNPNLPNQSDVVEAEGSHSNSPTNMATTARLEEAVWR
PY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgggcagtttggtatgtcttctctatcctggaccatgtacctgatgaggaaa
accagagcagccactggcttttttgataccagcaccagccgccgcttcacgccgccctcc
accacgctgagcccggggaagatgaccgagccgctgccgctgcccggcgccgagcacagc
ggcgcgctgccggggaagctgcgcagcgccgaccgcagcatggtggaggtcctggcggat
caccccggggagctggtgcgcaccgacagccccaacttcctctgctccgtgctgcccacc
cactggcgctgcaacaagacgctgcccatcgccttcaaggtggtggccttgggagatgtg
cccgatgggacgctggtaacggtgatggctggaaacgatgaaaactactctgcagaactc
agaaatgccacggccgccatgaaaaaccaagtagcaaggttcaatgacctccgattcgtg
ggtagaagtggaagagggaagagcttcacgctgactatcacggtcttcacaaatccgcca
caagtagccacataccacagagccatcaagataacagtggacggacctcgcgagcccaga
agacatcgtcagaaaatagatgagcagacaaagcccgggagcttgtccttttcagagcgc
ctgagtgaactggagcagttgcgtcgtacggccatgagggtcagcccacaccacccagcc
cccacacccaacccacgagcctccttgaaccacaccactgcttttaaccctcagcctcag
agtcagattcaggacacaaggcaagtacagccatctccgccatggtcctacgaccagtcc
taccagtacctgggctccattgccaccccttccgtgcaccccgccacgccaatatcaccc
ggcagggctagcggcatgacatccctcaccgcagagctttcaagtcggctgtcaagtgct
tctgacttgaccgcgttcagtgacccccgggtgggaatcgaccgctccttctccgcgctc
ccctccatttccgaccctcggatgcactacccgggagcgttcacctacacaccgacgccc
gtcagttcaggaataggaatcggtatgtctgccatgtccacggccacgagataccacact
tacctcccgcctccctaccccggctcgtcgcaggcccaaggcagccccttccagaccagc
tcgccctcctaccacctctactacggaacctccgccggctcctatcagttctccatgatc
tcggggggagaccggtcccctccacgcatccaccccccctgcactaacgcctccacggga
tcgacgctcctcaaccccaacctccccaaccaaagcgatgtggtcgaggcagaagggagc
cacagcaactcccccactaacatggcgaccacagcgaggctagaggaagcggtgtggcga
ccatactga
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integrated database retrieval system
